RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 HIST1H2BCP62807 126 aa9.75□□□□□ -0.85
CAVIN3-204ENST00000532354 HIST2H2BEQ16778 126 aa9.75□□□□□ -0.85
CAVIN3-204ENST00000532354 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.75□□□□□ -0.85
CAVIN3-204ENST00000532354 KRTAP13-1Q8IUC0 172 aa9.75□□□□□ -0.85
CAVIN3-204ENST00000532354 HIST1H2BHQ93079 126 aa9.75□□□□□ -0.85
CAVIN3-204ENST00000532354 HIST1H2BNQ99877 126 aa9.75□□□□□ -0.85
CAVIN3-204ENST00000532354 HIST1H2BMQ99879 126 aa9.75□□□□□ -0.85
CAVIN3-204ENST00000532354 TMEM223A0PJW6 202 aa9.73□□□□□ -0.85
CAVIN3-204ENST00000532354 FABP4P15090 132 aa9.73□□□□□ -0.85
CAVIN3-204ENST00000532354 COX17Q14061 63 aa9.73□□□□□ -0.85
CAVIN3-204ENST00000532354 PRR4Q16378 134 aa9.73□□□□□ -0.85
CAVIN3-204ENST00000532354 SND1-IT1Q9HBX3 110 aa9.73□□□□□ -0.85
CAVIN3-204ENST00000532354 ERG28Q9UKR5 140 aa9.73□□□□□ -0.85
CAVIN3-204ENST00000532354 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
CAVIN3-204ENST00000532354 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
CAVIN3-204ENST00000532354 CRYGAP11844 174 aa9.72□□□□□ -0.85
CAVIN3-204ENST00000532354 VPREB1P12018 145 aa9.72□□□□□ -0.85
CAVIN3-204ENST00000532354 UBE2AP49459 152 aa9.72□□□□□ -0.85
CAVIN3-204ENST00000532354 MAP1LC3CQ9BXW4 147 aa9.72□□□□□ -0.85
CAVIN3-204ENST00000532354 ANAPC11Q9NYG5 84 aa9.72□□□□□ -0.85
CAVIN3-204ENST00000532354 TSPAN13O95857 204 aa9.71□□□□□ -0.86
CAVIN3-204ENST00000532354 PLNP26678 52 aa9.71□□□□□ -0.86
CAVIN3-204ENST00000532354 ZNF625Q96I27 306 aaPredicted RBP9.71□□□□□ -0.86
CAVIN3-204ENST00000532354 H0Y8G0 127 aa9.7□□□□□ -0.86
CAVIN3-204ENST00000532354 TYMSOSQ8TAI1 123 aa9.7□□□□□ -0.86
CAVIN3-204ENST00000532354 Q8NDZ9 215 aa9.69□□□□□ -0.86
CAVIN3-204ENST00000532354 LINC00587B1AMM8 73 aa9.68□□□□□ -0.86
CAVIN3-204ENST00000532354 DPM2O94777 84 aa9.68□□□□□ -0.86
CAVIN3-204ENST00000532354 RPL24P83731 157 aaKnown RBP9.68□□□□□ -0.86
CAVIN3-204ENST00000532354 KRTAP13-2Q52LG2 175 aa9.68□□□□□ -0.86
CAVIN3-204ENST00000532354 COA6Q5JTJ3 125 aaKnown RBP9.67□□□□□ -0.86
CAVIN3-204ENST00000532354 TMEM126AQ9H061 195 aa9.67□□□□□ -0.86
CAVIN3-204ENST00000532354 TMEM238C9JI98 176 aa9.66□□□□□ -0.86
CAVIN3-204ENST00000532354 IGKCP01834 107 aa9.66□□□□□ -0.86
CAVIN3-204ENST00000532354 HERVK_113P61574 105 aa9.66□□□□□ -0.86
CAVIN3-204ENST00000532354 HERV-K104P63124 156 aa9.66□□□□□ -0.86
CAVIN3-204ENST00000532354 PRLHP81277 87 aa9.66□□□□□ -0.86
CAVIN3-204ENST00000532354 FAM229BQ4G0N7 80 aa9.65□□□□□ -0.86
CAVIN3-204ENST00000532354 FAM19A1Q7Z5A9 133 aa9.65□□□□□ -0.86
CAVIN3-204ENST00000532354 PLEKHB2Q96CS7 222 aa9.65□□□□□ -0.86
CAVIN3-204ENST00000532354 MYMXA0A1B0GTQ4 84 aa9.64□□□□□ -0.87
CAVIN3-204ENST00000532354 M0R378 163 aa9.64□□□□□ -0.87
CAVIN3-204ENST00000532354 LEPROTO15243 131 aa9.64□□□□□ -0.87
CAVIN3-204ENST00000532354 LINC00158P58513 81 aa9.64□□□□□ -0.87
CAVIN3-204ENST00000532354 SYS1-DBNDD2H3BUS1 97 aa9.63□□□□□ -0.87
CAVIN3-204ENST00000532354 ATP6V1G1O75348 118 aa9.63□□□□□ -0.87
CAVIN3-204ENST00000532354 PET117Q6UWS5 81 aa9.62□□□□□ -0.87
CAVIN3-204ENST00000532354 NDUFA12Q9UI09 145 aa9.62□□□□□ -0.87
CAVIN3-204ENST00000532354 A0A0U1RRA0 63 aa9.61□□□□□ -0.87
CAVIN3-204ENST00000532354 NMUP48645 174 aa9.6□□□□□ -0.87
CAVIN3-204ENST00000532354 PMCHL2Q9BQD1 86 aa9.6□□□□□ -0.87
CAVIN3-204ENST00000532354 IGKV2D-26A0A0A0MRZ7 120 aa9.59□□□□□ -0.87
CAVIN3-204ENST00000532354 J3QQQ9 107 aa9.59□□□□□ -0.87
CAVIN3-204ENST00000532354 MEIG1Q5JSS6 88 aa9.59□□□□□ -0.87
CAVIN3-204ENST00000532354 LINC00304Q8N9R0 145 aa9.59□□□□□ -0.87
CAVIN3-204ENST00000532354 SMIM13P0DJ93 91 aa9.58□□□□□ -0.88
CAVIN3-204ENST00000532354 LGALS3P17931 250 aaKnown RBP9.58□□□□□ -0.88
CAVIN3-204ENST00000532354 LINC01545Q5VT33 79 aa9.58□□□□□ -0.88
CAVIN3-204ENST00000532354 AKR1D1P51857 326 aa9.57□□□□□ -0.88
CAVIN3-204ENST00000532354 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
CAVIN3-204ENST00000532354 E9PLD3 99 aa9.56□□□□□ -0.88
CAVIN3-204ENST00000532354 HIGD2AQ9BW72 106 aa9.56□□□□□ -0.88
CAVIN3-204ENST00000532354 C3orf79P0CE67 100 aa9.55□□□□□ -0.88
CAVIN3-204ENST00000532354 BOD1L2Q8IYS8 172 aa9.55□□□□□ -0.88
CAVIN3-204ENST00000532354 MIR7-3HGQ8N6C7 128 aa9.55□□□□□ -0.88
CAVIN3-204ENST00000532354 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
CAVIN3-204ENST00000532354 MUC2Q02817 5179 aa9.54□□□□□ -0.88
CAVIN3-204ENST00000532354 C20orf202A1L168 122 aa9.54□□□□□ -0.88
CAVIN3-204ENST00000532354 KRTDAPP60985 99 aa9.54□□□□□ -0.88
CAVIN3-204ENST00000532354 C3orf22Q8N5N4 141 aa9.54□□□□□ -0.88
CAVIN3-204ENST00000532354 CTAG1AP78358 180 aa9.53□□□□□ -0.88
CAVIN3-204ENST00000532354 TSPEAR-AS2P59090 65 aa9.52□□□□□ -0.89
CAVIN3-204ENST00000532354 SPRR4Q96PI1 79 aa9.52□□□□□ -0.89
CAVIN3-204ENST00000532354 LOC107984156A0A0G2JMH3 177 aa9.51□□□□□ -0.89
CAVIN3-204ENST00000532354 PRYO14603 147 aa9.51□□□□□ -0.89
CAVIN3-204ENST00000532354 NCR3O14931 201 aa9.51□□□□□ -0.89
CAVIN3-204ENST00000532354 S100A6P06703 90 aa9.51□□□□□ -0.89
CAVIN3-204ENST00000532354 ARL17AQ8IVW1 177 aa9.51□□□□□ -0.89
CAVIN3-204ENST00000532354 KCNQ1DNQ9H478 68 aa9.51□□□□□ -0.89
CAVIN3-204ENST00000532354 S100A2P29034 98 aa9.5□□□□□ -0.89
CAVIN3-204ENST00000532354 SPRR1AP35321 89 aa9.5□□□□□ -0.89
CAVIN3-204ENST00000532354 LINC00337Q8N6G1 96 aa9.5□□□□□ -0.89
CAVIN3-204ENST00000532354 KRTAP4-16G5E9R7 235 aaPredicted RBP9.49□□□□□ -0.89
CAVIN3-204ENST00000532354 TRBV10-3A0A0K0K1G6 114 aa9.48□□□□□ -0.89
CAVIN3-204ENST00000532354 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
CAVIN3-204ENST00000532354 MIEN1Q9BRT3 115 aa9.47□□□□□ -0.89
CAVIN3-204ENST00000532354 ZNF706Q9Y5V0 76 aaPredicted RBP9.47□□□□□ -0.89
CAVIN3-204ENST00000532354 IGLV7-46A0A075B6I9 117 aa9.46□□□□□ -0.9
CAVIN3-204ENST00000532354 A0A0J9YXY3 114 aa9.46□□□□□ -0.9
CAVIN3-204ENST00000532354 SNRPEP62304 92 aaKnown RBP9.46□□□□□ -0.9
CAVIN3-204ENST00000532354 S100A12P80511 92 aa9.46□□□□□ -0.9
CAVIN3-204ENST00000532354 SPAG11AQ6PDA7 123 aa9.46□□□□□ -0.9
CAVIN3-204ENST00000532354 HIST3H2BBQ8N257 126 aa9.46□□□□□ -0.9
CAVIN3-204ENST00000532354 ETDCA0A1B0GVM5 59 aa9.45□□□□□ -0.9
CAVIN3-204ENST00000532354 TIMM17BO60830 172 aa9.45□□□□□ -0.9
CAVIN3-204ENST00000532354 TPRXLQ17RH7 258 aa9.45□□□□□ -0.9
CAVIN3-204ENST00000532354 DAND5Q8N907 189 aa9.45□□□□□ -0.9
CAVIN3-204ENST00000532354 HIST1H2BLQ99880 126 aa9.44□□□□□ -0.9
CAVIN3-204ENST00000532354 TRBV10-2A0A0K0K1G8 114 aa9.43□□□□□ -0.9
CAVIN3-204ENST00000532354 ZNF815PA8K554 130 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms