RNA–Protein interactions for RNA: ENST00000532117.1

RNPC3-207, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 3

Gene RNPC3, Length 237 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-207ENST00000532117 TOP2BQ02880 1626 aa-1.77□□□□□ -2.69
RNPC3-207ENST00000532117 CICQ96RK0 1608 aaPredicted RBP-1.77□□□□□ -2.69
RNPC3-207ENST00000532117 NBEAQ8NFP9 2946 aa-1.77□□□□□ -2.69
RNPC3-207ENST00000532117 LELP1Q5T871 98 aa-1.78□□□□□ -2.69
RNPC3-207ENST00000532117 KTN1Q86UP2 1357 aaKnown RBP-1.78□□□□□ -2.69
RNPC3-207ENST00000532117 GCN1Q92616 2671 aaKnown RBP-1.78□□□□□ -2.69
RNPC3-207ENST00000532117 KIAA1109Q2LD37 5005 aa-1.79□□□□□ -2.7
RNPC3-207ENST00000532117 SFTA2Q6UW10 78 aa-1.79□□□□□ -2.7
RNPC3-207ENST00000532117 C6orf201Q7Z4U5 140 aa-1.79□□□□□ -2.7
RNPC3-207ENST00000532117 SCAPERQ9BY12 1400 aa-1.8□□□□□ -2.7
RNPC3-207ENST00000532117 C12orf57Q99622 126 aa-1.8□□□□□ -2.7
RNPC3-207ENST00000532117 CDKN2A-AS1Q9UH64 79 aa-1.8□□□□□ -2.7
RNPC3-207ENST00000532117 NIPBLQ6KC79 2804 aaeCLIP-1.8□□□□□ -2.7
RNPC3-207ENST00000532117 CUL7Q14999 1698 aa-1.8□□□□□ -2.7
RNPC3-207ENST00000532117 TARBP1Q13395 1621 aaKnown RBP-1.8□□□□□ -2.7
RNPC3-207ENST00000532117 A0A087WVE0 104 aa-1.81□□□□□ -2.7
RNPC3-207ENST00000532117 WFDC13Q8IUB5 93 aa-1.81□□□□□ -2.7
RNPC3-207ENST00000532117 UTP20O75691 2785 aaKnown RBP-1.81□□□□□ -2.7
RNPC3-207ENST00000532117 WDR87Q6ZQQ6 2873 aa-1.82□□□□□ -2.7
RNPC3-207ENST00000532117 TRAV30A0A087WSZ9 112 aa-1.82□□□□□ -2.7
RNPC3-207ENST00000532117 AKAIN1P0CW23 69 aa-1.82□□□□□ -2.7
RNPC3-207ENST00000532117 SNCAP37840 140 aa-1.82□□□□□ -2.7
RNPC3-207ENST00000532117 HEPN1Q6WQI6 88 aa-1.82□□□□□ -2.7
RNPC3-207ENST00000532117 CCDC168Q8NDH2 2452 aa-1.82□□□□□ -2.7
RNPC3-207ENST00000532117 SHPRHQ149N8 1683 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 LAMA3Q16787 3333 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 NAP1L6A6NFF2 107 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 H3BNG1 76 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 NDUFA2O43678 99 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 PP6455Q8WZ26 134 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 HIGD1BQ9P298 99 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 CMYA5Q8N3K9 4069 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 RGPD2P0DJD1 1756 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 BCORQ6W2J9 1755 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 SACSQ9NZJ4 4579 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 CLIP1P30622 1438 aa-1.83□□□□□ -2.7
RNPC3-207ENST00000532117 A0A0G2JND7 137 aa-1.84□□□□□ -2.7
RNPC3-207ENST00000532117 FAM24AA6NFZ4 105 aa-1.84□□□□□ -2.7
RNPC3-207ENST00000532117 KNDC1Q76NI1 1749 aa-1.84□□□□□ -2.7
RNPC3-207ENST00000532117 A0A0C4DFX4 3053 aa-1.84□□□□□ -2.7
RNPC3-207ENST00000532117 H3BQF6 201 aa-1.85□□□□□ -2.71
RNPC3-207ENST00000532117 DNHD1Q96M86 4753 aa-1.86□□□□□ -2.71
RNPC3-207ENST00000532117 H0Y9P7 68 aa-1.86□□□□□ -2.71
RNPC3-207ENST00000532117 K7EP13 123 aa-1.86□□□□□ -2.71
RNPC3-207ENST00000532117 RELNP78509 3460 aa-1.86□□□□□ -2.71
RNPC3-207ENST00000532117 CHD1O14646 1710 aa-1.86□□□□□ -2.71
RNPC3-207ENST00000532117 C7orf77A4D0Y5 90 aa-1.87□□□□□ -2.71
RNPC3-207ENST00000532117 C9orf92A6NGG3 77 aa-1.87□□□□□ -2.71
RNPC3-207ENST00000532117 CCDC58Q4VC31 144 aa-1.87□□□□□ -2.71
RNPC3-207ENST00000532117 NBEAL2Q6ZNJ1 2754 aa-1.87□□□□□ -2.71
RNPC3-207ENST00000532117 UNC13AQ9UPW8 1703 aa-1.87□□□□□ -2.71
RNPC3-207ENST00000532117 DNAH8Q96JB1 4490 aa-1.87□□□□□ -2.71
RNPC3-207ENST00000532117 MYOM2P54296 1465 aa-1.88□□□□□ -2.71
RNPC3-207ENST00000532117 DNAH7Q8WXX0 4024 aa-1.88□□□□□ -2.71
RNPC3-207ENST00000532117 RNF213Q63HN8 5207 aa-1.88□□□□□ -2.71
RNPC3-207ENST00000532117 KIF20BQ96Q89 1820 aa-1.88□□□□□ -2.71
RNPC3-207ENST00000532117 ARMS2P0C7Q2 107 aa-1.88□□□□□ -2.71
RNPC3-207ENST00000532117 MAPKBP1O60336 1514 aa-1.88□□□□□ -2.71
RNPC3-207ENST00000532117 CEP290O15078 2479 aa-1.89□□□□□ -2.71
RNPC3-207ENST00000532117 TOPAZ1Q8N9V7 1692 aa-1.89□□□□□ -2.71
RNPC3-207ENST00000532117 CUX1P39880 1505 aa-1.89□□□□□ -2.71
RNPC3-207ENST00000532117 SPTY2D1-AS1A0A0U1RR47 76 aa-1.89□□□□□ -2.71
RNPC3-207ENST00000532117 HSD52Q0P140 79 aa-1.89□□□□□ -2.71
RNPC3-207ENST00000532117 DEFB107AQ8IZN7 70 aa-1.89□□□□□ -2.71
RNPC3-207ENST00000532117 C1orf54Q8WWF1 131 aa-1.89□□□□□ -2.71
RNPC3-207ENST00000532117 MON2Q7Z3U7 1717 aa-1.89□□□□□ -2.71
RNPC3-207ENST00000532117 ARHGAP5Q13017 1502 aa-1.9□□□□□ -2.71
RNPC3-207ENST00000532117 NALCNQ8IZF0 1738 aa-1.9□□□□□ -2.71
RNPC3-207ENST00000532117 CRYM-AS1A6NIL9 109 aa-1.9□□□□□ -2.71
RNPC3-207ENST00000532117 H3BQ15 152 aa-1.9□□□□□ -2.71
RNPC3-207ENST00000532117 CGREF1Q99674 301 aa-1.9□□□□□ -2.71
RNPC3-207ENST00000532117 VAMP8Q9BV40 100 aa-1.9□□□□□ -2.71
RNPC3-207ENST00000532117 IER3IP1Q9Y5U9 82 aa-1.9□□□□□ -2.71
RNPC3-207ENST00000532117 RIF1Q5UIP0 2472 aaKnown RBP-1.9□□□□□ -2.71
RNPC3-207ENST00000532117 GNGT1P63211 74 aa-1.91□□□□□ -2.72
RNPC3-207ENST00000532117 DSPP15924 2871 aaKnown RBP-1.91□□□□□ -2.72
RNPC3-207ENST00000532117 TRBV7-7A0A0K0K1E9 115 aa-1.92□□□□□ -2.72
RNPC3-207ENST00000532117 TMEM262E9PQX1 116 aa-1.92□□□□□ -2.72
RNPC3-207ENST00000532117 SPHKAPQ2M3C7 1700 aa-1.92□□□□□ -2.72
RNPC3-207ENST00000532117 RYR2Q92736 4967 aa-1.93□□□□□ -2.72
RNPC3-207ENST00000532117 KRTDAPP60985 99 aa-1.93□□□□□ -2.72
RNPC3-207ENST00000532117 C5P01031 1676 aa-1.93□□□□□ -2.72
RNPC3-207ENST00000532117 SAMD9Q5K651 1589 aa-1.93□□□□□ -2.72
RNPC3-207ENST00000532117 NRKQ7Z2Y5 1582 aa-1.93□□□□□ -2.72
RNPC3-207ENST00000532117 CC2D2AQ9P2K1 1620 aa-1.95□□□□□ -2.72
RNPC3-207ENST00000532117 SNAPC5O75971 98 aa-1.95□□□□□ -2.72
RNPC3-207ENST00000532117 SVBPQ8N300 66 aa-1.95□□□□□ -2.72
RNPC3-207ENST00000532117 TSC22D3Q99576 134 aa-1.95□□□□□ -2.72
RNPC3-207ENST00000532117 ANKRD50Q9ULJ7 1429 aa-1.95□□□□□ -2.72
RNPC3-207ENST00000532117 ACACBO00763 2458 aa-1.95□□□□□ -2.72
RNPC3-207ENST00000532117 USP9XQ93008 2570 aaPredicted RBP-1.96□□□□□ -2.72
RNPC3-207ENST00000532117 ROCK2O75116 1388 aaKnown RBP-1.96□□□□□ -2.72
RNPC3-207ENST00000532117 QSER1Q2KHR3 1735 aa-1.96□□□□□ -2.72
RNPC3-207ENST00000532117 TRBV25-1A0A075B6N4 114 aa-1.96□□□□□ -2.72
RNPC3-207ENST00000532117 C4AP0C0L4 1744 aa-1.97□□□□□ -2.72
RNPC3-207ENST00000532117 C4BP0C0L5 1744 aa-1.97□□□□□ -2.72
RNPC3-207ENST00000532117 ABCA3Q99758 1704 aa-1.97□□□□□ -2.72
RNPC3-207ENST00000532117 ASIPP42127 132 aa-1.97□□□□□ -2.72
RNPC3-207ENST00000532117 MT1HP80294 61 aa-1.97□□□□□ -2.72
RNPC3-207ENST00000532117 NMSQ5H8A3 153 aa-1.97□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms