RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 UBE2AP49459 152 aa7.81□□□□□ -1.16
SF3B2-212ENST00000531589 RPL24P83731 157 aaKnown RBP7.81□□□□□ -1.16
SF3B2-212ENST00000531589 H0Y8G0 127 aa7.8□□□□□ -1.16
SF3B2-212ENST00000531589 PRR4Q16378 134 aa7.8□□□□□ -1.16
SF3B2-212ENST00000531589 ERG28Q9UKR5 140 aa7.8□□□□□ -1.16
SF3B2-212ENST00000531589 FABP4P15090 132 aa7.79□□□□□ -1.16
SF3B2-212ENST00000531589 TMEM170BQ5T4T1 132 aa7.79□□□□□ -1.16
SF3B2-212ENST00000531589 TYMSOSQ8TAI1 123 aa7.79□□□□□ -1.16
SF3B2-212ENST00000531589 SND1-IT1Q9HBX3 110 aa7.79□□□□□ -1.16
SF3B2-212ENST00000531589 IGKV2-28A0A075B6P5 120 aa7.78□□□□□ -1.16
SF3B2-212ENST00000531589 IGKV2D-28P01615 120 aa7.78□□□□□ -1.16
SF3B2-212ENST00000531589 IFI27L1Q96BM0 104 aa7.78□□□□□ -1.16
SF3B2-212ENST00000531589 C11orf86A6NJI1 115 aa7.77□□□□□ -1.17
SF3B2-212ENST00000531589 ZNF625Q96I27 306 aaPredicted RBP7.77□□□□□ -1.17
SF3B2-212ENST00000531589 CHTOPQ9Y3Y2 248 aaKnown RBP7.77□□□□□ -1.17
SF3B2-212ENST00000531589 A0A087X002 238 aa7.76□□□□□ -1.17
SF3B2-212ENST00000531589 VPREB1P12018 145 aa7.76□□□□□ -1.17
SF3B2-212ENST00000531589 FAM229BQ4G0N7 80 aa7.76□□□□□ -1.17
SF3B2-212ENST00000531589 KRTAP13-1Q8IUC0 172 aa7.76□□□□□ -1.17
SF3B2-212ENST00000531589 LEPROTL1O95214 131 aa7.75□□□□□ -1.17
SF3B2-212ENST00000531589 TSPAN13O95857 204 aa7.75□□□□□ -1.17
SF3B2-212ENST00000531589 TMEM126AQ9H061 195 aa7.75□□□□□ -1.17
SF3B2-212ENST00000531589 TRAV12-1A0A0B4J245 112 aa7.74□□□□□ -1.17
SF3B2-212ENST00000531589 LINC00158P58513 81 aa7.74□□□□□ -1.17
SF3B2-212ENST00000531589 FAM19A1Q7Z5A9 133 aa7.74□□□□□ -1.17
SF3B2-212ENST00000531589 PMCHL2Q9BQD1 86 aa7.74□□□□□ -1.17
SF3B2-212ENST00000531589 LPAP08519 4548 aa7.73□□□□□ -1.17
SF3B2-212ENST00000531589 PRLHP81277 87 aa7.73□□□□□ -1.17
SF3B2-212ENST00000531589 IGKV2D-26A0A0A0MRZ7 120 aa7.72□□□□□ -1.17
SF3B2-212ENST00000531589 ANAPC11Q9NYG5 84 aa7.72□□□□□ -1.17
SF3B2-212ENST00000531589 TMEM223A0PJW6 202 aa7.71□□□□□ -1.18
SF3B2-212ENST00000531589 LINC00587B1AMM8 73 aa7.71□□□□□ -1.18
SF3B2-212ENST00000531589 TMEM238C9JI98 176 aa7.71□□□□□ -1.18
SF3B2-212ENST00000531589 M0R378 163 aa7.7□□□□□ -1.18
SF3B2-212ENST00000531589 HSPB8Q9UJY1 196 aa7.7□□□□□ -1.18
SF3B2-212ENST00000531589 HERV-K104P63124 156 aa7.69□□□□□ -1.18
SF3B2-212ENST00000531589 CTAG1AP78358 180 aa7.69□□□□□ -1.18
SF3B2-212ENST00000531589 KRTAP13-2Q52LG2 175 aa7.69□□□□□ -1.18
SF3B2-212ENST00000531589 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
SF3B2-212ENST00000531589 LINC00304Q8N9R0 145 aa7.69□□□□□ -1.18
SF3B2-212ENST00000531589 A0A0U1RRA0 63 aa7.68□□□□□ -1.18
SF3B2-212ENST00000531589 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
SF3B2-212ENST00000531589 PLEKHB2Q96CS7 222 aa7.67□□□□□ -1.18
SF3B2-212ENST00000531589 HIGD2AQ9BW72 106 aa7.67□□□□□ -1.18
SF3B2-212ENST00000531589 MAP1LC3CQ9BXW4 147 aa7.67□□□□□ -1.18
SF3B2-212ENST00000531589 SMIM13P0DJ93 91 aa7.66□□□□□ -1.18
SF3B2-212ENST00000531589 S100A12P80511 92 aa7.66□□□□□ -1.18
SF3B2-212ENST00000531589 BOD1L2Q8IYS8 172 aa7.66□□□□□ -1.18
SF3B2-212ENST00000531589 Q8NDZ9 215 aa7.66□□□□□ -1.18
SF3B2-212ENST00000531589 MYMXA0A1B0GTQ4 84 aa7.65□□□□□ -1.18
SF3B2-212ENST00000531589 SYS1-DBNDD2H3BUS1 97 aa7.65□□□□□ -1.18
SF3B2-212ENST00000531589 PRYO14603 147 aa7.65□□□□□ -1.18
SF3B2-212ENST00000531589 KRTDAPP60985 99 aa7.65□□□□□ -1.18
SF3B2-212ENST00000531589 MIR7-3HGQ8N6C7 128 aa7.65□□□□□ -1.18
SF3B2-212ENST00000531589 NDUFA12Q9UI09 145 aa7.65□□□□□ -1.18
SF3B2-212ENST00000531589 ZNF706Q9Y5V0 76 aaPredicted RBP7.65□□□□□ -1.18
SF3B2-212ENST00000531589 DPM2O94777 84 aa7.64□□□□□ -1.19
SF3B2-212ENST00000531589 C3orf79P0CE67 100 aa7.64□□□□□ -1.19
SF3B2-212ENST00000531589 A0A0U1RQV1 116 aa7.63□□□□□ -1.19
SF3B2-212ENST00000531589 IGKCP01834 107 aa7.63□□□□□ -1.19
SF3B2-212ENST00000531589 TSPEAR-AS2P59090 65 aa7.63□□□□□ -1.19
SF3B2-212ENST00000531589 SPAG11AQ6PDA7 123 aa7.63□□□□□ -1.19
SF3B2-212ENST00000531589 HIST3H2BBQ8N257 126 aa7.63□□□□□ -1.19
SF3B2-212ENST00000531589 PLNP26678 52 aa7.62□□□□□ -1.19
SF3B2-212ENST00000531589 LINC00337Q8N6G1 96 aa7.62□□□□□ -1.19
SF3B2-212ENST00000531589 SPRR4Q96PI1 79 aa7.62□□□□□ -1.19
SF3B2-212ENST00000531589 KCNQ1DNQ9H478 68 aa7.62□□□□□ -1.19
SF3B2-212ENST00000531589 ETDCA0A1B0GVM5 59 aa7.61□□□□□ -1.19
SF3B2-212ENST00000531589 NCR3O14931 201 aa7.61□□□□□ -1.19
SF3B2-212ENST00000531589 SNRPEP62304 92 aaKnown RBP7.61□□□□□ -1.19
SF3B2-212ENST00000531589 RETNLBQ9BQ08 111 aa7.61□□□□□ -1.19
SF3B2-212ENST00000531589 LEPROTO15243 131 aa7.6□□□□□ -1.19
SF3B2-212ENST00000531589 S100A6P06703 90 aa7.6□□□□□ -1.19
SF3B2-212ENST00000531589 SPRR1AP35321 89 aa7.6□□□□□ -1.19
SF3B2-212ENST00000531589 HERVK_113P61574 105 aa7.6□□□□□ -1.19
SF3B2-212ENST00000531589 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
SF3B2-212ENST00000531589 ATOH7Q8N100 152 aa7.6□□□□□ -1.19
SF3B2-212ENST00000531589 HIST1H2BLQ99880 126 aa7.6□□□□□ -1.19
SF3B2-212ENST00000531589 S100A2P29034 98 aa7.59□□□□□ -1.19
SF3B2-212ENST00000531589 LINC01545Q5VT33 79 aa7.59□□□□□ -1.19
SF3B2-212ENST00000531589 PET117Q6UWS5 81 aa7.59□□□□□ -1.19
SF3B2-212ENST00000531589 C3orf22Q8N5N4 141 aa7.59□□□□□ -1.19
SF3B2-212ENST00000531589 MIEN1Q9BRT3 115 aa7.59□□□□□ -1.19
SF3B2-212ENST00000531589 CDIP1Q9H305 208 aa7.59□□□□□ -1.19
SF3B2-212ENST00000531589 IGLV7-46A0A075B6I9 117 aa7.58□□□□□ -1.2
SF3B2-212ENST00000531589 LOC107984156A0A0G2JMH3 177 aa7.58□□□□□ -1.2
SF3B2-212ENST00000531589 TRBV10-3A0A0K0K1G6 114 aa7.58□□□□□ -1.2
SF3B2-212ENST00000531589 J3QQQ9 107 aa7.58□□□□□ -1.2
SF3B2-212ENST00000531589 NMUP48645 174 aa7.58□□□□□ -1.2
SF3B2-212ENST00000531589 TPRXLQ17RH7 258 aa7.58□□□□□ -1.2
SF3B2-212ENST00000531589 ARL17AQ8IVW1 177 aa7.58□□□□□ -1.2
SF3B2-212ENST00000531589 TRBV10-2A0A0K0K1G8 114 aa7.57□□□□□ -1.2
SF3B2-212ENST00000531589 SMCR5Q8TEV8 140 aa7.57□□□□□ -1.2
SF3B2-212ENST00000531589 TMA7Q9Y2S6 64 aaKnown RBP7.57□□□□□ -1.2
SF3B2-212ENST00000531589 KRTAP4-16G5E9R7 235 aaPredicted RBP7.56□□□□□ -1.2
SF3B2-212ENST00000531589 LGALS3P17931 250 aaKnown RBP7.56□□□□□ -1.2
SF3B2-212ENST00000531589 MUC2Q02817 5179 aa7.55□□□□□ -1.2
SF3B2-212ENST00000531589 DDTP30046 118 aa7.55□□□□□ -1.2
SF3B2-212ENST00000531589 DAND5Q8N907 189 aa7.55□□□□□ -1.2
SF3B2-212ENST00000531589 TTTY13Q9BZ97 58 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms