RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 RNASE3P12724 160 aaKnown RBP1.75□□□□□ -2.13
PTPRK-220ENST00000531466 SPINK7P58062 85 aa1.75□□□□□ -2.13
PTPRK-220ENST00000531466 RPL38P63173 70 aaKnown RBP1.75□□□□□ -2.13
PTPRK-220ENST00000531466 ZNF625Q96I27 306 aaPredicted RBP1.75□□□□□ -2.13
PTPRK-220ENST00000531466 SPAG17Q6Q759 2223 aa1.75□□□□□ -2.13
PTPRK-220ENST00000531466 SPTBP11277 2137 aa1.75□□□□□ -2.13
PTPRK-220ENST00000531466 GPR179Q6PRD1 2367 aa1.74□□□□□ -2.13
PTPRK-220ENST00000531466 C4BP0C0L5 1744 aa1.74□□□□□ -2.13
PTPRK-220ENST00000531466 ZNF831Q5JPB2 1677 aa1.74□□□□□ -2.13
PTPRK-220ENST00000531466 ETDCA0A1B0GVM5 59 aa1.74□□□□□ -2.13
PTPRK-220ENST00000531466 MRPL33O75394 65 aaKnown RBP1.74□□□□□ -2.13
PTPRK-220ENST00000531466 COA5Q86WW8 74 aa1.74□□□□□ -2.13
PTPRK-220ENST00000531466 KCNQ1DNQ9H478 68 aa1.74□□□□□ -2.13
PTPRK-220ENST00000531466 R4GN34 69 aa1.74□□□□□ -2.13
PTPRK-220ENST00000531466 PRRC2BQ5JSZ5 2229 aaKnown RBP1.74□□□□□ -2.13
PTPRK-220ENST00000531466 TNRC6BQ9UPQ9 1833 aaKnown RBP1.73□□□□□ -2.13
PTPRK-220ENST00000531466 A0A087WTM6 91 aa1.73□□□□□ -2.13
PTPRK-220ENST00000531466 TRGV1A0A0A0MS02 117 aa1.73□□□□□ -2.13
PTPRK-220ENST00000531466 NBDYA0A0U1RRE5 68 aa1.73□□□□□ -2.13
PTPRK-220ENST00000531466 HAMPP81172 84 aa1.73□□□□□ -2.13
PTPRK-220ENST00000531466 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
PTPRK-220ENST00000531466 C10orf55Q5SWW7 151 aa1.73□□□□□ -2.13
PTPRK-220ENST00000531466 SDK2Q58EX2 2172 aa1.73□□□□□ -2.13
PTPRK-220ENST00000531466 PCDH15Q96QU1 1955 aa1.72□□□□□ -2.13
PTPRK-220ENST00000531466 TRGV2A0A075B6R0 118 aa1.72□□□□□ -2.13
PTPRK-220ENST00000531466 A0A1B0GU69 56 aa1.72□□□□□ -2.13
PTPRK-220ENST00000531466 NCR3O14931 201 aa1.72□□□□□ -2.13
PTPRK-220ENST00000531466 COX7BP24311 80 aa1.72□□□□□ -2.13
PTPRK-220ENST00000531466 PRR9Q5T870 116 aa1.72□□□□□ -2.13
PTPRK-220ENST00000531466 CCL26Q9Y258 94 aa1.72□□□□□ -2.13
PTPRK-220ENST00000531466 CACNA1GO43497 2377 aa1.72□□□□□ -2.13
PTPRK-220ENST00000531466 ZGRF1Q86YA3 2104 aa1.72□□□□□ -2.13
PTPRK-220ENST00000531466 NCOA6Q14686 2063 aaPredicted RBP1.71□□□□□ -2.13
PTPRK-220ENST00000531466 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.71□□□□□ -2.14
PTPRK-220ENST00000531466 IGKV2-29A2NJV5 120 aaPredicted RBP1.71□□□□□ -2.14
PTPRK-220ENST00000531466 DEFB134Q4QY38 66 aa1.71□□□□□ -2.14
PTPRK-220ENST00000531466 C5orf56Q8N8D9 126 aa1.71□□□□□ -2.14
PTPRK-220ENST00000531466 CR1P17927 2039 aa1.71□□□□□ -2.14
PTPRK-220ENST00000531466 COL4A5P29400 1685 aa1.71□□□□□ -2.14
PTPRK-220ENST00000531466 A0A0G2JQZ4 141 aa1.7□□□□□ -2.14
PTPRK-220ENST00000531466 ACYP2P14621 99 aa1.7□□□□□ -2.14
PTPRK-220ENST00000531466 SMIM2Q9BVW6 85 aa1.7□□□□□ -2.14
PTPRK-220ENST00000531466 CHD8Q9HCK8 2581 aa1.7□□□□□ -2.14
PTPRK-220ENST00000531466 MED12Q93074 2177 aa1.69□□□□□ -2.14
PTPRK-220ENST00000531466 HRES1P13985 223 aa1.69□□□□□ -2.14
PTPRK-220ENST00000531466 KMT2BQ9UMN6 2715 aaPredicted RBP1.69□□□□□ -2.14
PTPRK-220ENST00000531466 DNAJC13O75165 2243 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 TRANK1O15050 2925 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 ZFHX3Q15911 3703 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 DEFB131BA0A096LNP1 70 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 LINC00959A0A1B0GUT2 108 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 INE1O15225 51 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 TET1Q8NFU7 2136 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 Q96NJ1 140 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 CNFNQ9BYD5 112 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 LINC00472Q9H8W2 130 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 CACNA1DQ01668 2161 aa1.68□□□□□ -2.14
PTPRK-220ENST00000531466 SEC16AO15027 2179 aa1.67□□□□□ -2.14
PTPRK-220ENST00000531466 IGLV6-57P01721 117 aa1.67□□□□□ -2.14
PTPRK-220ENST00000531466 IAPPP10997 89 aa1.67□□□□□ -2.14
PTPRK-220ENST00000531466 TFF3Q07654 80 aa1.67□□□□□ -2.14
PTPRK-220ENST00000531466 TPRXLQ17RH7 258 aa1.67□□□□□ -2.14
PTPRK-220ENST00000531466 PLXNB2O15031 1838 aa1.67□□□□□ -2.14
PTPRK-220ENST00000531466 ARHGAP32A7KAX9 2087 aa1.67□□□□□ -2.14
PTPRK-220ENST00000531466 MDC1Q14676 2089 aaKnown RBP1.67□□□□□ -2.14
PTPRK-220ENST00000531466 ARFGEF3Q5TH69 2177 aa1.66□□□□□ -2.14
PTPRK-220ENST00000531466 A0A0C4DFX4 3053 aa1.66□□□□□ -2.14
PTPRK-220ENST00000531466 MUC6Q6W4X9 2439 aa1.66□□□□□ -2.14
PTPRK-220ENST00000531466 CPSF4LA6NMK7 179 aaKnown RBP1.66□□□□□ -2.14
PTPRK-220ENST00000531466 M0R2N4 97 aa1.66□□□□□ -2.14
PTPRK-220ENST00000531466 Q6ZQY7 126 aa1.66□□□□□ -2.14
PTPRK-220ENST00000531466 SPACA4Q8TDM5 124 aa1.66□□□□□ -2.14
PTPRK-220ENST00000531466 PRR14LQ5THK1 2151 aa1.66□□□□□ -2.14
PTPRK-220ENST00000531466 SSC5DA1L4H1 1573 aa1.65□□□□□ -2.15
PTPRK-220ENST00000531466 H3BRN7 92 aa1.65□□□□□ -2.15
PTPRK-220ENST00000531466 NDUFA1O15239 70 aa1.65□□□□□ -2.15
PTPRK-220ENST00000531466 LY6G6CO95867 125 aa1.65□□□□□ -2.15
PTPRK-220ENST00000531466 FXYD4P59646 89 aa1.65□□□□□ -2.15
PTPRK-220ENST00000531466 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.65□□□□□ -2.15
PTPRK-220ENST00000531466 LINC00304Q8N9R0 145 aa1.65□□□□□ -2.15
PTPRK-220ENST00000531466 ARHGAP5-AS1Q96IT6 56 aa1.65□□□□□ -2.15
PTPRK-220ENST00000531466 CCL19Q99731 98 aa1.65□□□□□ -2.15
PTPRK-220ENST00000531466 SHANK1Q9Y566 2161 aa1.65□□□□□ -2.15
PTPRK-220ENST00000531466 TNRC6CQ9HCJ0 1690 aaKnown RBP1.64□□□□□ -2.15
PTPRK-220ENST00000531466 SPTY2D1-AS1A0A0U1RR47 76 aa1.64□□□□□ -2.15
PTPRK-220ENST00000531466 SMIM11BQ8TCY0 68 aa1.64□□□□□ -2.15
PTPRK-220ENST00000531466 LINC00308Q8TCZ7 52 aa1.64□□□□□ -2.15
PTPRK-220ENST00000531466 ESPL1Q14674 2120 aa1.64□□□□□ -2.15
PTPRK-220ENST00000531466 ABCA4P78363 2273 aa1.63□□□□□ -2.15
PTPRK-220ENST00000531466 ANGP03950 147 aaKnown RBP1.63□□□□□ -2.15
PTPRK-220ENST00000531466 LINC00158P58513 81 aa1.63□□□□□ -2.15
PTPRK-220ENST00000531466 DOCK10Q96BY6 2186 aa1.63□□□□□ -2.15
PTPRK-220ENST00000531466 COL4A2P08572 1712 aa1.63□□□□□ -2.15
PTPRK-220ENST00000531466 PDE4DIPQ5VU43 2346 aa1.62□□□□□ -2.15
PTPRK-220ENST00000531466 C10orf99Q6UWK7 81 aa1.62□□□□□ -2.15
PTPRK-220ENST00000531466 RPS27LQ71UM5 84 aaKnown RBP1.62□□□□□ -2.15
PTPRK-220ENST00000531466 SSBP3-AS1Q7Z2R9 100 aa1.62□□□□□ -2.15
PTPRK-220ENST00000531466 Q8IZM0 81 aa1.62□□□□□ -2.15
PTPRK-220ENST00000531466 SDK1Q7Z5N4 2213 aa1.61□□□□□ -2.15
PTPRK-220ENST00000531466 KRTAP13-4Q3LI77 160 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms