RNA–Protein interactions for RNA: ENST00000531429.1

SCUBE2-211, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5

Gene SCUBE2, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-211ENST00000531429 RMI2Q96E14 147 aa4.57□□□□□ -1.68
SCUBE2-211ENST00000531429 AMELXQ99217 191 aa4.57□□□□□ -1.68
SCUBE2-211ENST00000531429 CHCHD7Q9BUK0 85 aa4.57□□□□□ -1.68
SCUBE2-211ENST00000531429 SRRM2Q9UQ35 2752 aaKnown RBP4.56□□□□□ -1.68
SCUBE2-211ENST00000531429 MYMXA0A1B0GTQ4 84 aa4.56□□□□□ -1.68
SCUBE2-211ENST00000531429 A6NDN8 102 aa4.56□□□□□ -1.68
SCUBE2-211ENST00000531429 MPV17L2Q567V2 206 aa4.56□□□□□ -1.68
SCUBE2-211ENST00000531429 BVES-AS1Q5T3Y7 98 aa4.56□□□□□ -1.68
SCUBE2-211ENST00000531429 Q6ZSA8 131 aa4.56□□□□□ -1.68
SCUBE2-211ENST00000531429 C2orf91Q6ZV80 131 aa4.56□□□□□ -1.68
SCUBE2-211ENST00000531429 PCP2Q8IVA1 136 aa4.56□□□□□ -1.68
SCUBE2-211ENST00000531429 UBE2D4Q9Y2X8 147 aa4.56□□□□□ -1.68
SCUBE2-211ENST00000531429 IGLV4-69A0A075B6H9 119 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 TRBV25-1A0A075B6N4 114 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 IGKV2D-26A0A0A0MRZ7 120 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 A0A1B0GV90 55 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 TINCRA0A1B0GVN0 87 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 TMEM262E9PQX1 116 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 UBE2L6O14933 153 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 TSPAN13O95857 204 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 ZNF25P17030 456 aaPredicted RBP4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 TMEM170BQ5T4T1 132 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 DEFB104AQ8WTQ1 72 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 ORAOV1Q8WV07 137 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 PLEKHB2Q96CS7 222 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 TMEM101Q96IK0 257 aa4.55□□□□□ -1.68
SCUBE2-211ENST00000531429 LEPROTO15243 131 aa4.54□□□□□ -1.68
SCUBE2-211ENST00000531429 CRPP02741 224 aa4.54□□□□□ -1.68
SCUBE2-211ENST00000531429 CHCHD10Q8WYQ3 142 aaPredicted RBP4.54□□□□□ -1.68
SCUBE2-211ENST00000531429 TMEM243Q9BU79 118 aa4.54□□□□□ -1.68
SCUBE2-211ENST00000531429 CHAC1Q9BUX1 264 aa4.54□□□□□ -1.68
SCUBE2-211ENST00000531429 DNAH8Q96JB1 4490 aa4.54□□□□□ -1.68
SCUBE2-211ENST00000531429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 TMEM223A0PJW6 202 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 IGKV2-29A2NJV5 120 aaPredicted RBP4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 ZNF815PA8K554 130 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 H3BRM9 83 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 LGALS3P17931 250 aaKnown RBP4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 HERVK_113P63121 156 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 C14orf177Q52M58 125 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 AMMECR1LQ6DCA0 310 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 CLPSL2Q6UWE3 100 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 FAM19A3Q7Z5A8 133 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 CEND1Q8N111 149 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 OR5A1Q8NGJ0 315 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 CIRBP-AS1Q8TBR5 109 aa4.53□□□□□ -1.68
SCUBE2-211ENST00000531429 TRBV6-8A0A0A6YYG3 113 aa4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 IGHV1-58A0A0C4DH39 117 aa4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 A0A0J9YXV3 536 aa4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 J3QQQ9 107 aa4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 ANGP03950 147 aaKnown RBP4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 SMIM13P0DJ93 91 aa4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 ZNF22P17026 224 aaPredicted RBP4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 UBE2D1P51668 147 aa4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 SCGB1D4Q6XE38 83 aa4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 LINC00469Q8N7U9 141 aa4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 HIST1H4GQ99525 98 aa4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 CDC42SE2Q9NRR3 84 aa4.52□□□□□ -1.69
SCUBE2-211ENST00000531429 KRTAP16-1A8MUX0 517 aa4.51□□□□□ -1.69
SCUBE2-211ENST00000531429 RPL37AP61513 92 aaKnown RBP4.51□□□□□ -1.69
SCUBE2-211ENST00000531429 PRR4Q16378 134 aa4.51□□□□□ -1.69
SCUBE2-211ENST00000531429 NTM-AS1Q6ZSK4 140 aa4.51□□□□□ -1.69
SCUBE2-211ENST00000531429 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
SCUBE2-211ENST00000531429 FAM104AQ969W3 186 aa4.51□□□□□ -1.69
SCUBE2-211ENST00000531429 SPANXB1Q9NS25 103 aaPredicted RBP4.51□□□□□ -1.69
SCUBE2-211ENST00000531429 TAX1BP3O14907 124 aa4.5□□□□□ -1.69
SCUBE2-211ENST00000531429 CCL25O15444 150 aa4.5□□□□□ -1.69
SCUBE2-211ENST00000531429 ENHOQ6UWT2 76 aa4.5□□□□□ -1.69
SCUBE2-211ENST00000531429 Q6ZUT4 128 aa4.5□□□□□ -1.69
SCUBE2-211ENST00000531429 Q6ZVH6 145 aa4.5□□□□□ -1.69
SCUBE2-211ENST00000531429 TP73-AS1Q9UF72 201 aa4.5□□□□□ -1.69
SCUBE2-211ENST00000531429 IGLV8-61A0A075B6I0 122 aa4.49□□□□□ -1.69
SCUBE2-211ENST00000531429 TMEM238C9JI98 176 aa4.49□□□□□ -1.69
SCUBE2-211ENST00000531429 KRTAP10-4P60372 401 aaPredicted RBP4.49□□□□□ -1.69
SCUBE2-211ENST00000531429 TTTY13Q9BZ97 58 aa4.49□□□□□ -1.69
SCUBE2-211ENST00000531429 IGLV10-54A0A075B6I4 117 aa4.48□□□□□ -1.69
SCUBE2-211ENST00000531429 RBX1P62877 108 aa4.48□□□□□ -1.69
SCUBE2-211ENST00000531429 CIRBPQ14011 172 aaKnown RBP4.48□□□□□ -1.69
SCUBE2-211ENST00000531429 VAMP3Q15836 100 aa4.48□□□□□ -1.69
SCUBE2-211ENST00000531429 MIAQ16674 131 aa4.48□□□□□ -1.69
SCUBE2-211ENST00000531429 SFTA2Q6UW10 78 aa4.48□□□□□ -1.69
SCUBE2-211ENST00000531429 GTF2H5Q6ZYL4 71 aa4.48□□□□□ -1.69
SCUBE2-211ENST00000531429 LINC00269Q8N2A0 174 aa4.48□□□□□ -1.69
SCUBE2-211ENST00000531429 COPS9Q8WXC6 57 aa4.48□□□□□ -1.69
SCUBE2-211ENST00000531429 LRP1Q07954 4544 aaKnown RBP4.47□□□□□ -1.69
SCUBE2-211ENST00000531429 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
SCUBE2-211ENST00000531429 TIMM17BO60830 172 aa4.47□□□□□ -1.69
SCUBE2-211ENST00000531429 OXTP01178 125 aa4.47□□□□□ -1.69
SCUBE2-211ENST00000531429 FXYD2P54710 66 aa4.47□□□□□ -1.69
SCUBE2-211ENST00000531429 Q1RN00 199 aa4.47□□□□□ -1.69
SCUBE2-211ENST00000531429 RNASE13Q5GAN3 156 aaKnown RBP4.47□□□□□ -1.69
SCUBE2-211ENST00000531429 NHP2Q9NX24 153 aaKnown RBP4.47□□□□□ -1.69
SCUBE2-211ENST00000531429 CDKN2A-AS1Q9UH64 79 aa4.47□□□□□ -1.69
SCUBE2-211ENST00000531429 NDUFA12Q9UI09 145 aa4.47□□□□□ -1.69
SCUBE2-211ENST00000531429 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.46□□□□□ -1.7
SCUBE2-211ENST00000531429 A0A0J9YXY3 114 aa4.46□□□□□ -1.7
SCUBE2-211ENST00000531429 PANO1I0J062 215 aa4.46□□□□□ -1.7
SCUBE2-211ENST00000531429 NDUFA1O15239 70 aa4.46□□□□□ -1.7
SCUBE2-211ENST00000531429 FABP2P12104 132 aa4.46□□□□□ -1.7
SCUBE2-211ENST00000531429 IFITM1P13164 125 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms