RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 C18orf32Q8TCD1 76 aa9.31□□□□□ -0.92
CPSF1-205ENST00000531042 ATP5LO75964 103 aa9.3□□□□□ -0.92
CPSF1-205ENST00000531042 TSPAN13O95857 204 aa9.3□□□□□ -0.92
CPSF1-205ENST00000531042 IGLC3P0DOY3 106 aa9.3□□□□□ -0.92
CPSF1-205ENST00000531042 CRYGAP11844 174 aa9.3□□□□□ -0.92
CPSF1-205ENST00000531042 PYY3Q5JQD4 70 aa9.3□□□□□ -0.92
CPSF1-205ENST00000531042 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
CPSF1-205ENST00000531042 A0A096LNJ9 63 aa9.29□□□□□ -0.92
CPSF1-205ENST00000531042 IGLV5-39A0A0G2JS06 123 aa9.29□□□□□ -0.92
CPSF1-205ENST00000531042 JOSD1Q15040 202 aaPredicted RBP9.29□□□□□ -0.92
CPSF1-205ENST00000531042 TYMSOSQ8TAI1 123 aa9.29□□□□□ -0.92
CPSF1-205ENST00000531042 PFN2P35080 140 aa9.28□□□□□ -0.92
CPSF1-205ENST00000531042 UBE2AP49459 152 aa9.28□□□□□ -0.92
CPSF1-205ENST00000531042 ZNF22P17026 224 aaPredicted RBP9.27□□□□□ -0.93
CPSF1-205ENST00000531042 S100A12P80511 92 aa9.27□□□□□ -0.93
CPSF1-205ENST00000531042 URB1-AS1Q96HZ7 61 aa9.27□□□□□ -0.93
CPSF1-205ENST00000531042 ANAPC11Q9NYG5 84 aa9.27□□□□□ -0.93
CPSF1-205ENST00000531042 IGKV2-28A0A075B6P5 120 aa9.26□□□□□ -0.93
CPSF1-205ENST00000531042 IGKV2D-28P01615 120 aa9.26□□□□□ -0.93
CPSF1-205ENST00000531042 LINC00614P0C842 121 aa9.26□□□□□ -0.93
CPSF1-205ENST00000531042 CHCHD1Q96BP2 118 aaKnown RBP9.26□□□□□ -0.93
CPSF1-205ENST00000531042 KRTAP13-2Q52LG2 175 aa9.25□□□□□ -0.93
CPSF1-205ENST00000531042 ERG28Q9UKR5 140 aa9.25□□□□□ -0.93
CPSF1-205ENST00000531042 MUC2Q02817 5179 aa9.25□□□□□ -0.93
CPSF1-205ENST00000531042 HSBP1O75506 76 aa9.24□□□□□ -0.93
CPSF1-205ENST00000531042 HBDP02042 147 aa9.24□□□□□ -0.93
CPSF1-205ENST00000531042 VPREB1P12018 145 aa9.24□□□□□ -0.93
CPSF1-205ENST00000531042 COX17Q14061 63 aa9.24□□□□□ -0.93
CPSF1-205ENST00000531042 SND1-IT1Q9HBX3 110 aa9.24□□□□□ -0.93
CPSF1-205ENST00000531042 PMCHL1Q16048 86 aa9.23□□□□□ -0.93
CPSF1-205ENST00000531042 FAM229BQ4G0N7 80 aa9.23□□□□□ -0.93
CPSF1-205ENST00000531042 ZNF625Q96I27 306 aaPredicted RBP9.22□□□□□ -0.93
CPSF1-205ENST00000531042 TMEM126AQ9H061 195 aa9.22□□□□□ -0.93
CPSF1-205ENST00000531042 C11orf86A6NJI1 115 aa9.21□□□□□ -0.94
CPSF1-205ENST00000531042 PRLHP81277 87 aa9.21□□□□□ -0.94
CPSF1-205ENST00000531042 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
CPSF1-205ENST00000531042 TMEM238C9JI98 176 aa9.2□□□□□ -0.94
CPSF1-205ENST00000531042 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
CPSF1-205ENST00000531042 FAM19A1Q7Z5A9 133 aa9.2□□□□□ -0.94
CPSF1-205ENST00000531042 Q8NDZ9 215 aa9.2□□□□□ -0.94
CPSF1-205ENST00000531042 M0R378 163 aa9.19□□□□□ -0.94
CPSF1-205ENST00000531042 SFTA2Q6UW10 78 aa9.19□□□□□ -0.94
CPSF1-205ENST00000531042 LINC00304Q8N9R0 145 aa9.18□□□□□ -0.94
CPSF1-205ENST00000531042 IGKV2D-26A0A0A0MRZ7 120 aa9.17□□□□□ -0.94
CPSF1-205ENST00000531042 SCGB1D1O95968 90 aa9.17□□□□□ -0.94
CPSF1-205ENST00000531042 FAM19A2Q8N3H0 131 aa9.17□□□□□ -0.94
CPSF1-205ENST00000531042 PCP4L1A6NKN8 68 aa9.16□□□□□ -0.94
CPSF1-205ENST00000531042 CHTOPQ9Y3Y2 248 aaKnown RBP9.16□□□□□ -0.94
CPSF1-205ENST00000531042 C3orf79P0CE67 100 aa9.15□□□□□ -0.94
CPSF1-205ENST00000531042 KRTDAPP60985 99 aa9.15□□□□□ -0.94
CPSF1-205ENST00000531042 PLEKHB2Q96CS7 222 aa9.15□□□□□ -0.94
CPSF1-205ENST00000531042 RETNLBQ9BQ08 111 aa9.15□□□□□ -0.94
CPSF1-205ENST00000531042 HSPB8Q9UJY1 196 aa9.15□□□□□ -0.94
CPSF1-205ENST00000531042 TMEM223A0PJW6 202 aa9.14□□□□□ -0.95
CPSF1-205ENST00000531042 TSTD3H0UI37 97 aa9.14□□□□□ -0.95
CPSF1-205ENST00000531042 LEPROTL1O95214 131 aa9.14□□□□□ -0.95
CPSF1-205ENST00000531042 LINC00158P58513 81 aa9.14□□□□□ -0.95
CPSF1-205ENST00000531042 TRAV12-1A0A0B4J245 112 aa9.12□□□□□ -0.95
CPSF1-205ENST00000531042 A0A0U1RRA0 63 aa9.12□□□□□ -0.95
CPSF1-205ENST00000531042 C20orf202A1L168 122 aa9.12□□□□□ -0.95
CPSF1-205ENST00000531042 CTAG1AP78358 180 aa9.12□□□□□ -0.95
CPSF1-205ENST00000531042 A0A0U1RQV1 116 aa9.11□□□□□ -0.95
CPSF1-205ENST00000531042 C3orf22Q8N5N4 141 aa9.11□□□□□ -0.95
CPSF1-205ENST00000531042 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
CPSF1-205ENST00000531042 PET117Q6UWS5 81 aa9.1□□□□□ -0.95
CPSF1-205ENST00000531042 IFI27L1Q96BM0 104 aa9.1□□□□□ -0.95
CPSF1-205ENST00000531042 VAMP8Q9BV40 100 aa9.1□□□□□ -0.95
CPSF1-205ENST00000531042 MAP1LC3CQ9BXW4 147 aa9.1□□□□□ -0.95
CPSF1-205ENST00000531042 SYS1-DBNDD2H3BUS1 97 aa9.09□□□□□ -0.95
CPSF1-205ENST00000531042 SMIM13P0DJ93 91 aa9.08□□□□□ -0.96
CPSF1-205ENST00000531042 TPRXLQ17RH7 258 aa9.08□□□□□ -0.96
CPSF1-205ENST00000531042 SPRR4Q96PI1 79 aa9.08□□□□□ -0.96
CPSF1-205ENST00000531042 IGLV7-46A0A075B6I9 117 aa9.07□□□□□ -0.96
CPSF1-205ENST00000531042 LINC00587B1AMM8 73 aa9.06□□□□□ -0.96
CPSF1-205ENST00000531042 PRYO14603 147 aa9.06□□□□□ -0.96
CPSF1-205ENST00000531042 DDTP30046 118 aa9.06□□□□□ -0.96
CPSF1-205ENST00000531042 MEIG1Q5JSS6 88 aa9.06□□□□□ -0.96
CPSF1-205ENST00000531042 BOD1L2Q8IYS8 172 aa9.06□□□□□ -0.96
CPSF1-205ENST00000531042 CDIP1Q9H305 208 aa9.06□□□□□ -0.96
CPSF1-205ENST00000531042 PRO1933Q9H354 126 aa9.06□□□□□ -0.96
CPSF1-205ENST00000531042 NCR3O14931 201 aa9.05□□□□□ -0.96
CPSF1-205ENST00000531042 HERV-K104P63124 156 aa9.05□□□□□ -0.96
CPSF1-205ENST00000531042 LINC01545Q5VT33 79 aa9.05□□□□□ -0.96
CPSF1-205ENST00000531042 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
CPSF1-205ENST00000531042 MIR7-3HGQ8N6C7 128 aa9.05□□□□□ -0.96
CPSF1-205ENST00000531042 ZNF706Q9Y5V0 76 aaPredicted RBP9.05□□□□□ -0.96
CPSF1-205ENST00000531042 SPRR1AP35321 89 aa9.04□□□□□ -0.96
CPSF1-205ENST00000531042 LINC00337Q8N6G1 96 aa9.04□□□□□ -0.96
CPSF1-205ENST00000531042 KCNQ1DNQ9H478 68 aa9.04□□□□□ -0.96
CPSF1-205ENST00000531042 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
CPSF1-205ENST00000531042 NDUFA12Q9UI09 145 aa9.03□□□□□ -0.96
CPSF1-205ENST00000531042 PAM16Q9Y3D7 125 aa9.03□□□□□ -0.96
CPSF1-205ENST00000531042 FAT4Q6V0I7 4981 aa9.02□□□□□ -0.96
CPSF1-205ENST00000531042 KRTAP4-16G5E9R7 235 aaPredicted RBP9.02□□□□□ -0.97
CPSF1-205ENST00000531042 SPATA45Q537H7 98 aa9.02□□□□□ -0.97
CPSF1-205ENST00000531042 PPDPFQ9H3Y8 114 aa9.02□□□□□ -0.97
CPSF1-205ENST00000531042 MYMXA0A1B0GTQ4 84 aa9.01□□□□□ -0.97
CPSF1-205ENST00000531042 SMCR5Q8TEV8 140 aa9.01□□□□□ -0.97
CPSF1-205ENST00000531042 MIEN1Q9BRT3 115 aa9.01□□□□□ -0.97
CPSF1-205ENST00000531042 TRBV10-3A0A0K0K1G6 114 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms