RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 Q9UF83 564 aa5.76□□□□□ -1.49
CTNND1-227ENST00000530748 CHTF8P0CG12 524 aa5.76□□□□□ -1.49
CTNND1-227ENST00000530748 LINC00313P59037 77 aa5.76□□□□□ -1.49
CTNND1-227ENST00000530748 A0A1B0GU69 56 aa5.76□□□□□ -1.49
CTNND1-227ENST00000530748 ACACBO00763 2458 aa5.76□□□□□ -1.49
CTNND1-227ENST00000530748 WNK1Q9H4A3 2382 aa5.75□□□□□ -1.49
CTNND1-227ENST00000530748 PCSK5Q92824 1860 aa5.75□□□□□ -1.49
CTNND1-227ENST00000530748 ATP11AUNQ6ZP68 121 aa5.75□□□□□ -1.49
CTNND1-227ENST00000530748 TYMSOSQ8TAI1 123 aa5.75□□□□□ -1.49
CTNND1-227ENST00000530748 ST20-AS1Q8NBB2 130 aa5.74□□□□□ -1.49
CTNND1-227ENST00000530748 PRO0461Q9UI25 63 aa5.73□□□□□ -1.49
CTNND1-227ENST00000530748 PTPN13Q12923 2485 aa5.73□□□□□ -1.49
CTNND1-227ENST00000530748 DNAH10OSP0CZ25 163 aa5.73□□□□□ -1.49
CTNND1-227ENST00000530748 IGLV6-57P01721 117 aa5.72□□□□□ -1.49
CTNND1-227ENST00000530748 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
CTNND1-227ENST00000530748 RPL37AP61513 92 aaKnown RBP5.71□□□□□ -1.49
CTNND1-227ENST00000530748 LITAFQ99732 161 aa5.71□□□□□ -1.49
CTNND1-227ENST00000530748 CUL9Q8IWT3 2517 aa5.71□□□□□ -1.49
CTNND1-227ENST00000530748 CCDC168Q8NDH2 2452 aa5.71□□□□□ -1.5
CTNND1-227ENST00000530748 SPG11Q96JI7 2443 aa5.7□□□□□ -1.5
CTNND1-227ENST00000530748 C8orf87E5RJ46 101 aa5.7□□□□□ -1.5
CTNND1-227ENST00000530748 TRAV22A0A0B4J277 110 aa5.7□□□□□ -1.5
CTNND1-227ENST00000530748 TRBV7-4A0A0J9YYF1 115 aa5.7□□□□□ -1.5
CTNND1-227ENST00000530748 FAM168BA1KXE4 195 aa5.7□□□□□ -1.5
CTNND1-227ENST00000530748 SORL1Q92673 2214 aa5.69□□□□□ -1.5
CTNND1-227ENST00000530748 Q96NJ1 140 aa5.69□□□□□ -1.5
CTNND1-227ENST00000530748 DOPEY1Q5JWR5 2465 aa5.69□□□□□ -1.5
CTNND1-227ENST00000530748 IGLV1-50A0A075B6I6 118 aa5.69□□□□□ -1.5
CTNND1-227ENST00000530748 CSNK1G2-AS1Q8NCQ2 148 aa5.69□□□□□ -1.5
CTNND1-227ENST00000530748 ARHGAP32A7KAX9 2087 aa5.68□□□□□ -1.5
CTNND1-227ENST00000530748 A8MWP4 228 aa5.68□□□□□ -1.5
CTNND1-227ENST00000530748 KRTAP10-11P60412 298 aa5.68□□□□□ -1.5
CTNND1-227ENST00000530748 BDP1A6H8Y1 2624 aa5.68□□□□□ -1.5
CTNND1-227ENST00000530748 SPAG11AQ6PDA7 123 aa5.67□□□□□ -1.5
CTNND1-227ENST00000530748 LOC101927531A0A1B0GV80 90 aa5.67□□□□□ -1.5
CTNND1-227ENST00000530748 AGRNO00468 2067 aa5.66□□□□□ -1.5
CTNND1-227ENST00000530748 CACNA1AO00555 2505 aa5.66□□□□□ -1.5
CTNND1-227ENST00000530748 KCNQ1DNQ9H478 68 aa5.66□□□□□ -1.5
CTNND1-227ENST00000530748 TM2D3Q9BRN9 247 aa5.65□□□□□ -1.5
CTNND1-227ENST00000530748 C19orf73Q9NVV2 129 aa5.65□□□□□ -1.5
CTNND1-227ENST00000530748 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.51
CTNND1-227ENST00000530748 PRRC2AP48634 2157 aaKnown RBP5.65□□□□□ -1.51
CTNND1-227ENST00000530748 ANKHD1Q8IWZ3 2542 aaKnown RBP5.65□□□□□ -1.51
CTNND1-227ENST00000530748 TTC28Q96AY4 2481 aa5.65□□□□□ -1.51
CTNND1-227ENST00000530748 SRCAPQ6ZRS2 3230 aa5.64□□□□□ -1.51
CTNND1-227ENST00000530748 MRPL34Q9BQ48 92 aaKnown RBP5.64□□□□□ -1.51
CTNND1-227ENST00000530748 HIVEP3Q5T1R4 2406 aa5.64□□□□□ -1.51
CTNND1-227ENST00000530748 CSPG4Q6UVK1 2322 aa5.64□□□□□ -1.51
CTNND1-227ENST00000530748 ERC2-IT1O76042 136 aa5.63□□□□□ -1.51
CTNND1-227ENST00000530748 KRTAP10-3P60369 221 aa5.63□□□□□ -1.51
CTNND1-227ENST00000530748 K7EQZ3 153 aa5.63□□□□□ -1.51
CTNND1-227ENST00000530748 C15orf56Q8N910 161 aa5.63□□□□□ -1.51
CTNND1-227ENST00000530748 C4orf26Q17RF5 130 aa5.63□□□□□ -1.51
CTNND1-227ENST00000530748 K7EIL1 84 aa5.62□□□□□ -1.51
CTNND1-227ENST00000530748 LINC00336Q6ZUF6 198 aa5.62□□□□□ -1.51
CTNND1-227ENST00000530748 PLA2G2DQ9UNK4 145 aa5.62□□□□□ -1.51
CTNND1-227ENST00000530748 A0A096LNT2 108 aa5.61□□□□□ -1.51
CTNND1-227ENST00000530748 PLXNB1O43157 2135 aa5.61□□□□□ -1.51
CTNND1-227ENST00000530748 IGFL1Q6UW32 110 aa5.61□□□□□ -1.51
CTNND1-227ENST00000530748 PRR34Q9NV39 138 aa5.61□□□□□ -1.51
CTNND1-227ENST00000530748 LINC00528Q8N1L1 170 aa5.6□□□□□ -1.51
CTNND1-227ENST00000530748 TLX1NBP0CAT3 122 aa5.6□□□□□ -1.51
CTNND1-227ENST00000530748 C9orf129Q5T035 196 aaKnown RBP5.6□□□□□ -1.51
CTNND1-227ENST00000530748 LINC00612Q8N6U2 182 aa5.59□□□□□ -1.51
CTNND1-227ENST00000530748 DSCR10P59022 87 aa5.59□□□□□ -1.51
CTNND1-227ENST00000530748 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
CTNND1-227ENST00000530748 COA5Q86WW8 74 aa5.59□□□□□ -1.52
CTNND1-227ENST00000530748 RBM12B-AS1Q9P1G2 102 aa5.59□□□□□ -1.52
CTNND1-227ENST00000530748 NAV2Q8IVL1 2488 aa5.59□□□□□ -1.52
CTNND1-227ENST00000530748 LINC00304Q8N9R0 145 aa5.58□□□□□ -1.52
CTNND1-227ENST00000530748 C8orf17Q9NRJ1 99 aa5.58□□□□□ -1.52
CTNND1-227ENST00000530748 MYO18BQ8IUG5 2567 aa5.57□□□□□ -1.52
CTNND1-227ENST00000530748 ZNF861PO60384 105 aa5.57□□□□□ -1.52
CTNND1-227ENST00000530748 GIG44P09565 113 aaPredicted RBP5.57□□□□□ -1.52
CTNND1-227ENST00000530748 NAV3Q8IVL0 2385 aa5.57□□□□□ -1.52
CTNND1-227ENST00000530748 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
CTNND1-227ENST00000530748 A0A087WTM6 91 aa5.56□□□□□ -1.52
CTNND1-227ENST00000530748 ABCA2Q9BZC7 2435 aa5.56□□□□□ -1.52
CTNND1-227ENST00000530748 IGLV8-61A0A075B6I0 122 aa5.56□□□□□ -1.52
CTNND1-227ENST00000530748 PRR15Q8IV56 129 aa5.55□□□□□ -1.52
CTNND1-227ENST00000530748 SSBP3-AS1Q7Z2R9 100 aa5.55□□□□□ -1.52
CTNND1-227ENST00000530748 Q8N377 158 aa5.55□□□□□ -1.52
CTNND1-227ENST00000530748 M0R2T5 61 aa5.54□□□□□ -1.52
CTNND1-227ENST00000530748 CYP4F30PQ9H0H9 118 aa5.53□□□□□ -1.52
CTNND1-227ENST00000530748 C9orf92A6NGG3 77 aa5.53□□□□□ -1.52
CTNND1-227ENST00000530748 APLNQ9ULZ1 77 aa5.53□□□□□ -1.52
CTNND1-227ENST00000530748 OBSCN-AS1Q96MR7 158 aa5.53□□□□□ -1.52
CTNND1-227ENST00000530748 IGLV7-43P04211 117 aa5.52□□□□□ -1.53
CTNND1-227ENST00000530748 IGLV5-37A0A075B6J1 123 aa5.52□□□□□ -1.53
CTNND1-227ENST00000530748 CNBPP62633 177 aaKnown RBP5.51□□□□□ -1.53
CTNND1-227ENST00000530748 EIF4EBP3O60516 100 aaPredicted RBP5.51□□□□□ -1.53
CTNND1-227ENST00000530748 C9orf163Q8N9P6 203 aa5.51□□□□□ -1.53
CTNND1-227ENST00000530748 LINC01600Q96MT4 127 aa5.51□□□□□ -1.53
CTNND1-227ENST00000530748 KRTAP1-3Q8IUG1 177 aa5.5□□□□□ -1.53
CTNND1-227ENST00000530748 A0A1W2PNN7 141 aa5.5□□□□□ -1.53
CTNND1-227ENST00000530748 UQCR11O14957 56 aa5.49□□□□□ -1.53
CTNND1-227ENST00000530748 ZNF575Q86XF7 245 aa5.49□□□□□ -1.53
CTNND1-227ENST00000530748 PIEZO1Q92508 2521 aa5.49□□□□□ -1.53
CTNND1-227ENST00000530748 SPRR4Q96PI1 79 aa5.49□□□□□ -1.53
CTNND1-227ENST00000530748 A8MUN3 132 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms