RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TNP2Q05952 138 aa9.4□□□□□ -0.91
TTC39A-216ENST00000530004 CARD19Q96LW7 228 aa9.4□□□□□ -0.91
TTC39A-216ENST00000530004 FABP2P12104 132 aa9.39□□□□□ -0.91
TTC39A-216ENST00000530004 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
TTC39A-216ENST00000530004 Q1RN00 199 aa9.39□□□□□ -0.91
TTC39A-216ENST00000530004 IGKV2-28A0A075B6P5 120 aa9.38□□□□□ -0.91
TTC39A-216ENST00000530004 A0A087WTM6 91 aa9.38□□□□□ -0.91
TTC39A-216ENST00000530004 IGKV2D-28P01615 120 aa9.38□□□□□ -0.91
TTC39A-216ENST00000530004 LINC00336Q6ZUF6 198 aa9.38□□□□□ -0.91
TTC39A-216ENST00000530004 NDUFC2-KCTD14E9PQ53 114 aa9.37□□□□□ -0.91
TTC39A-216ENST00000530004 RYR3Q15413 4870 aa9.37□□□□□ -0.91
TTC39A-216ENST00000530004 DNAH2Q9P225 4427 aa9.37□□□□□ -0.91
TTC39A-216ENST00000530004 TRAV13-2A0A0B4J235 113 aa9.36□□□□□ -0.91
TTC39A-216ENST00000530004 LINC00337Q8N6G1 96 aa9.36□□□□□ -0.91
TTC39A-216ENST00000530004 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
TTC39A-216ENST00000530004 SPCS1Q9Y6A9 102 aa9.36□□□□□ -0.91
TTC39A-216ENST00000530004 NDUFC2O95298 119 aa9.35□□□□□ -0.91
TTC39A-216ENST00000530004 PSMB2P49721 201 aa9.35□□□□□ -0.91
TTC39A-216ENST00000530004 RNF151Q2KHN1 245 aa9.35□□□□□ -0.91
TTC39A-216ENST00000530004 GAGE10A6NGK3 116 aa9.35□□□□□ -0.91
TTC39A-216ENST00000530004 K7EP34 96 aa9.34□□□□□ -0.91
TTC39A-216ENST00000530004 PRR3P79522 188 aaKnown RBP9.34□□□□□ -0.91
TTC39A-216ENST00000530004 UBE2V1Q13404 147 aa9.34□□□□□ -0.91
TTC39A-216ENST00000530004 GAGE2EQ4V326 116 aa9.34□□□□□ -0.91
TTC39A-216ENST00000530004 C14orf177Q52M58 125 aa9.34□□□□□ -0.91
TTC39A-216ENST00000530004 Q6ZRP5 223 aa9.34□□□□□ -0.91
TTC39A-216ENST00000530004 Q8NDZ9 215 aa9.34□□□□□ -0.91
TTC39A-216ENST00000530004 GAGE2DQ9UEU5 116 aa9.34□□□□□ -0.91
TTC39A-216ENST00000530004 GTF2H5Q6ZYL4 71 aa9.33□□□□□ -0.92
TTC39A-216ENST00000530004 Q8N814 137 aa9.33□□□□□ -0.92
TTC39A-216ENST00000530004 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
TTC39A-216ENST00000530004 RPL18AQ02543 176 aaKnown RBP9.32□□□□□ -0.92
TTC39A-216ENST00000530004 LYRM7Q5U5X0 104 aa9.32□□□□□ -0.92
TTC39A-216ENST00000530004 NCR3O14931 201 aa9.32□□□□□ -0.92
TTC39A-216ENST00000530004 TRIAP1O43715 76 aa9.32□□□□□ -0.92
TTC39A-216ENST00000530004 SCGB1C2P0DMR2 95 aa9.32□□□□□ -0.92
TTC39A-216ENST00000530004 OR13C6PQ8NH95 151 aa9.32□□□□□ -0.92
TTC39A-216ENST00000530004 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.31□□□□□ -0.92
TTC39A-216ENST00000530004 CNBPP62633 177 aaKnown RBP9.31□□□□□ -0.92
TTC39A-216ENST00000530004 DNAH17Q9UFH2 4485 aa9.3□□□□□ -0.92
TTC39A-216ENST00000530004 A0A1B0GVY2 172 aa9.28□□□□□ -0.92
TTC39A-216ENST00000530004 COX6CP09669 75 aa9.28□□□□□ -0.92
TTC39A-216ENST00000530004 C9orf129Q5T035 196 aaKnown RBP9.28□□□□□ -0.92
TTC39A-216ENST00000530004 FRAS1Q86XX4 4008 aa9.28□□□□□ -0.92
TTC39A-216ENST00000530004 LOC107984640A0A0U1RRK4 108 aa9.27□□□□□ -0.92
TTC39A-216ENST00000530004 TCL1BO95988 128 aa9.27□□□□□ -0.92
TTC39A-216ENST00000530004 SMIM11BQ8TCY0 68 aa9.27□□□□□ -0.92
TTC39A-216ENST00000530004 H3BMG7 143 aa9.27□□□□□ -0.93
TTC39A-216ENST00000530004 VPREB1P12018 145 aa9.27□□□□□ -0.93
TTC39A-216ENST00000530004 KRTAP10-2P60368 255 aa9.27□□□□□ -0.93
TTC39A-216ENST00000530004 GAGE2BQ13066 116 aa9.27□□□□□ -0.93
TTC39A-216ENST00000530004 FAT2Q9NYQ8 4349 aa9.26□□□□□ -0.93
TTC39A-216ENST00000530004 TRBV20-1A0A075B6N2 111 aa9.26□□□□□ -0.93
TTC39A-216ENST00000530004 TRBV10-2A0A0K0K1G8 114 aa9.26□□□□□ -0.93
TTC39A-216ENST00000530004 RPL28P46779 137 aaKnown RBP9.26□□□□□ -0.93
TTC39A-216ENST00000530004 S100A7L2Q5SY68 101 aa9.26□□□□□ -0.93
TTC39A-216ENST00000530004 TMEM126AQ9H061 195 aa9.26□□□□□ -0.93
TTC39A-216ENST00000530004 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
TTC39A-216ENST00000530004 IGLV5-52A0A0A0MRZ9 124 aa9.23□□□□□ -0.93
TTC39A-216ENST00000530004 SERTAD4-AS1Q5TG53 156 aa9.23□□□□□ -0.93
TTC39A-216ENST00000530004 CLEC2BQ92478 149 aa9.23□□□□□ -0.93
TTC39A-216ENST00000530004 IGLV6-57P01721 117 aa9.22□□□□□ -0.93
TTC39A-216ENST00000530004 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
TTC39A-216ENST00000530004 M0R378 163 aa9.22□□□□□ -0.93
TTC39A-216ENST00000530004 C9orf163Q8N9P6 203 aa9.22□□□□□ -0.93
TTC39A-216ENST00000530004 PLA2G2DQ9UNK4 145 aa9.22□□□□□ -0.93
TTC39A-216ENST00000530004 A0A096LNI7 61 aa9.21□□□□□ -0.94
TTC39A-216ENST00000530004 TRBV10-3A0A0K0K1G6 114 aa9.21□□□□□ -0.94
TTC39A-216ENST00000530004 FAM168BA1KXE4 195 aa9.21□□□□□ -0.94
TTC39A-216ENST00000530004 C16orf90A8MZG2 172 aa9.21□□□□□ -0.94
TTC39A-216ENST00000530004 MTURNQ8N3F0 131 aa9.2□□□□□ -0.94
TTC39A-216ENST00000530004 NKAPP1Q8N9T2 125 aa9.2□□□□□ -0.94
TTC39A-216ENST00000530004 IGKV2-24A0A0C4DH68 120 aa9.19□□□□□ -0.94
TTC39A-216ENST00000530004 LST1O00453 97 aa9.19□□□□□ -0.94
TTC39A-216ENST00000530004 LINC01620Q4KN68 170 aa9.19□□□□□ -0.94
TTC39A-216ENST00000530004 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
TTC39A-216ENST00000530004 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
TTC39A-216ENST00000530004 C6orf99Q4VX62 202 aa9.17□□□□□ -0.94
TTC39A-216ENST00000530004 FAM19A5Q7Z5A7 132 aaPredicted RBP9.17□□□□□ -0.94
TTC39A-216ENST00000530004 KRTAP7-1Q8IUC3 87 aa9.17□□□□□ -0.94
TTC39A-216ENST00000530004 PKIGQ9Y2B9 76 aa9.17□□□□□ -0.94
TTC39A-216ENST00000530004 F8W1H4 67 aa9.17□□□□□ -0.94
TTC39A-216ENST00000530004 H0YGX0 51 aa9.17□□□□□ -0.94
TTC39A-216ENST00000530004 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
TTC39A-216ENST00000530004 FAM218AQ96MZ4 157 aa9.17□□□□□ -0.94
TTC39A-216ENST00000530004 PRO0461Q9UI25 63 aa9.17□□□□□ -0.94
TTC39A-216ENST00000530004 C9JAW5 83 aa9.16□□□□□ -0.94
TTC39A-216ENST00000530004 SDIM1Q6ZPB5 146 aa9.16□□□□□ -0.94
TTC39A-216ENST00000530004 C22orf24Q9Y442 160 aa9.16□□□□□ -0.94
TTC39A-216ENST00000530004 DNAH11Q96DT5 4516 aa9.15□□□□□ -0.94
TTC39A-216ENST00000530004 CHTF8P0CG12 524 aa9.15□□□□□ -0.94
TTC39A-216ENST00000530004 PKD1P98161 4303 aa9.15□□□□□ -0.95
TTC39A-216ENST00000530004 A0A087WYN8 130 aa9.14□□□□□ -0.95
TTC39A-216ENST00000530004 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
TTC39A-216ENST00000530004 ZNF73O43830 326 aaPredicted RBP9.13□□□□□ -0.95
TTC39A-216ENST00000530004 TRACP01848 142 aa9.13□□□□□ -0.95
TTC39A-216ENST00000530004 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
TTC39A-216ENST00000530004 KRTAP10-1P60331 282 aa9.13□□□□□ -0.95
TTC39A-216ENST00000530004 MRPL55Q7Z7F7 128 aaKnown RBP9.13□□□□□ -0.95
TTC39A-216ENST00000530004 DIRC1Q969H9 104 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms