RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
SNRNP35-205ENST00000529201 CST9LQ9H4G1 147 aa8.23□□□□□ -1.09
SNRNP35-205ENST00000529201 PMVKQ15126 192 aa8.22□□□□□ -1.09
SNRNP35-205ENST00000529201 KRTAP7-1Q8IUC3 87 aa8.22□□□□□ -1.09
SNRNP35-205ENST00000529201 HIST1H2BLQ99880 126 aa8.22□□□□□ -1.09
SNRNP35-205ENST00000529201 KRTAP4-7Q9BYR0 210 aa8.22□□□□□ -1.09
SNRNP35-205ENST00000529201 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
SNRNP35-205ENST00000529201 H0Y9J4 135 aa8.21□□□□□ -1.1
SNRNP35-205ENST00000529201 LBHQ53QV2 105 aaPredicted RBP8.21□□□□□ -1.1
SNRNP35-205ENST00000529201 A0A096LNJ9 63 aa8.2□□□□□ -1.1
SNRNP35-205ENST00000529201 H3BRM9 83 aa8.2□□□□□ -1.1
SNRNP35-205ENST00000529201 KRTDAPP60985 99 aa8.2□□□□□ -1.1
SNRNP35-205ENST00000529201 PET117Q6UWS5 81 aa8.2□□□□□ -1.1
SNRNP35-205ENST00000529201 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
SNRNP35-205ENST00000529201 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
SNRNP35-205ENST00000529201 TP73-AS1Q9UF72 201 aa8.19□□□□□ -1.1
SNRNP35-205ENST00000529201 TNXBP22105 4242 aa8.18□□□□□ -1.1
SNRNP35-205ENST00000529201 TRAV12-1A0A0B4J245 112 aa8.18□□□□□ -1.1
SNRNP35-205ENST00000529201 H0Y8G0 127 aa8.18□□□□□ -1.1
SNRNP35-205ENST00000529201 SYS1-DBNDD2H3BUS1 97 aa8.18□□□□□ -1.1
SNRNP35-205ENST00000529201 C22orf24Q9Y442 160 aa8.18□□□□□ -1.1
SNRNP35-205ENST00000529201 XAGE1AQ9HD64 81 aa8.17□□□□□ -1.1
SNRNP35-205ENST00000529201 IGLV1-50A0A075B6I6 118 aa8.16□□□□□ -1.1
SNRNP35-205ENST00000529201 SCGB1D1O95968 90 aa8.16□□□□□ -1.1
SNRNP35-205ENST00000529201 C3orf79P0CE67 100 aa8.16□□□□□ -1.1
SNRNP35-205ENST00000529201 IGLC3P0DOY3 106 aa8.16□□□□□ -1.1
SNRNP35-205ENST00000529201 CHTOPQ9Y3Y2 248 aaKnown RBP8.16□□□□□ -1.1
SNRNP35-205ENST00000529201 PLNP26678 52 aa8.15□□□□□ -1.1
SNRNP35-205ENST00000529201 MRPL55Q7Z7F7 128 aaKnown RBP8.15□□□□□ -1.1
SNRNP35-205ENST00000529201 UBR4Q5T4S7 5183 aa8.15□□□□□ -1.11
SNRNP35-205ENST00000529201 ZNF861PO60384 105 aa8.14□□□□□ -1.11
SNRNP35-205ENST00000529201 SPINK8P0C7L1 97 aa8.14□□□□□ -1.11
SNRNP35-205ENST00000529201 DPM2O94777 84 aa8.13□□□□□ -1.11
SNRNP35-205ENST00000529201 RPL13AP40429 203 aaKnown RBP8.13□□□□□ -1.11
SNRNP35-205ENST00000529201 SFTA2Q6UW10 78 aa8.13□□□□□ -1.11
SNRNP35-205ENST00000529201 PRR26Q8N8Z3 221 aa8.13□□□□□ -1.11
SNRNP35-205ENST00000529201 IGLV5-37A0A075B6J1 123 aa8.12□□□□□ -1.11
SNRNP35-205ENST00000529201 IGLV5-39A0A0G2JS06 123 aa8.12□□□□□ -1.11
SNRNP35-205ENST00000529201 HSBP1L1C9JCN9 74 aa8.12□□□□□ -1.11
SNRNP35-205ENST00000529201 KRTAP1-4P0C5Y4 121 aa8.12□□□□□ -1.11
SNRNP35-205ENST00000529201 LINC01545Q5VT33 79 aa8.12□□□□□ -1.11
SNRNP35-205ENST00000529201 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
SNRNP35-205ENST00000529201 IGKCP01834 107 aa8.11□□□□□ -1.11
SNRNP35-205ENST00000529201 ZNF22P17026 224 aaPredicted RBP8.11□□□□□ -1.11
SNRNP35-205ENST00000529201 HERVK_113P61574 105 aa8.11□□□□□ -1.11
SNRNP35-205ENST00000529201 COX17Q14061 63 aa8.11□□□□□ -1.11
SNRNP35-205ENST00000529201 BCE1O60756 84 aa8.1□□□□□ -1.11
SNRNP35-205ENST00000529201 RPL28P46779 137 aaKnown RBP8.1□□□□□ -1.11
SNRNP35-205ENST00000529201 JOSD1Q15040 202 aaPredicted RBP8.1□□□□□ -1.11
SNRNP35-205ENST00000529201 S100A12P80511 92 aa8.09□□□□□ -1.11
SNRNP35-205ENST00000529201 TMEM170BQ5T4T1 132 aa8.09□□□□□ -1.11
SNRNP35-205ENST00000529201 NKAPP1Q8N9T2 125 aa8.09□□□□□ -1.11
SNRNP35-205ENST00000529201 LINC00167Q96N53 147 aa8.09□□□□□ -1.11
SNRNP35-205ENST00000529201 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
SNRNP35-205ENST00000529201 SMIM6P0DI80 62 aa8.07□□□□□ -1.12
SNRNP35-205ENST00000529201 ERG28Q9UKR5 140 aa8.07□□□□□ -1.12
SNRNP35-205ENST00000529201 PFN2P35080 140 aa8.06□□□□□ -1.12
SNRNP35-205ENST00000529201 RPL24P83731 157 aaKnown RBP8.06□□□□□ -1.12
SNRNP35-205ENST00000529201 PMCHL2Q9BQD1 86 aa8.06□□□□□ -1.12
SNRNP35-205ENST00000529201 C11orf86A6NJI1 115 aa8.05□□□□□ -1.12
SNRNP35-205ENST00000529201 RPL37AP8A6NKH3 93 aa8.05□□□□□ -1.12
SNRNP35-205ENST00000529201 VAMP8Q9BV40 100 aa8.05□□□□□ -1.12
SNRNP35-205ENST00000529201 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
SNRNP35-205ENST00000529201 GAGE10A6NGK3 116 aa8.03□□□□□ -1.12
SNRNP35-205ENST00000529201 PYY3Q5JQD4 70 aa8.03□□□□□ -1.12
SNRNP35-205ENST00000529201 ZNF625Q96I27 306 aaPredicted RBP8.03□□□□□ -1.12
SNRNP35-205ENST00000529201 VPREB1P12018 145 aa8.02□□□□□ -1.13
SNRNP35-205ENST00000529201 ATOH7Q8N100 152 aa8.02□□□□□ -1.13
SNRNP35-205ENST00000529201 PLEKHB2Q96CS7 222 aa8.02□□□□□ -1.13
SNRNP35-205ENST00000529201 KRTAP4-9Q9BYQ8 210 aa8.02□□□□□ -1.13
SNRNP35-205ENST00000529201 LRP2P98164 4655 aa8.01□□□□□ -1.13
SNRNP35-205ENST00000529201 TMEM223A0PJW6 202 aa8.01□□□□□ -1.13
SNRNP35-205ENST00000529201 CRYGAP11844 174 aa8.01□□□□□ -1.13
SNRNP35-205ENST00000529201 UBE2AP49459 152 aa8.01□□□□□ -1.13
SNRNP35-205ENST00000529201 KRTAP13-1Q8IUC0 172 aa8.01□□□□□ -1.13
SNRNP35-205ENST00000529201 IGKV2-28A0A075B6P5 120 aa8□□□□□ -1.13
SNRNP35-205ENST00000529201 IGKV2D-28P01615 120 aa8□□□□□ -1.13
SNRNP35-205ENST00000529201 LGALS3P17931 250 aaKnown RBP8□□□□□ -1.13
SNRNP35-205ENST00000529201 LINC00587B1AMM8 73 aa7.99□□□□□ -1.13
SNRNP35-205ENST00000529201 E9PLD3 99 aa7.99□□□□□ -1.13
SNRNP35-205ENST00000529201 LEPROTO15243 131 aa7.98□□□□□ -1.13
SNRNP35-205ENST00000529201 NMUP48645 174 aa7.98□□□□□ -1.13
SNRNP35-205ENST00000529201 LINC00158P58513 81 aa7.98□□□□□ -1.13
SNRNP35-205ENST00000529201 HERV-K104P63124 156 aa7.98□□□□□ -1.13
SNRNP35-205ENST00000529201 FAM229BQ4G0N7 80 aa7.98□□□□□ -1.13
SNRNP35-205ENST00000529201 SPATA45Q537H7 98 aa7.98□□□□□ -1.13
SNRNP35-205ENST00000529201 TMEM126AQ9H061 195 aa7.98□□□□□ -1.13
SNRNP35-205ENST00000529201 PAM16Q9Y3D7 125 aa7.98□□□□□ -1.13
SNRNP35-205ENST00000529201 TYMSOSQ8TAI1 123 aa7.97□□□□□ -1.13
SNRNP35-205ENST00000529201 C12orf57Q99622 126 aa7.97□□□□□ -1.13
SNRNP35-205ENST00000529201 A0A087X002 238 aa7.96□□□□□ -1.14
SNRNP35-205ENST00000529201 J3QQQ9 107 aa7.96□□□□□ -1.14
SNRNP35-205ENST00000529201 FAM19A1Q7Z5A9 133 aa7.96□□□□□ -1.14
SNRNP35-205ENST00000529201 MYMXA0A1B0GTQ4 84 aa7.95□□□□□ -1.14
SNRNP35-205ENST00000529201 TSTD3H0UI37 97 aa7.94□□□□□ -1.14
SNRNP35-205ENST00000529201 M0R378 163 aa7.94□□□□□ -1.14
SNRNP35-205ENST00000529201 CTAG1AP78358 180 aa7.94□□□□□ -1.14
SNRNP35-205ENST00000529201 RNF213Q63HN8 5207 aa7.93□□□□□ -1.14
SNRNP35-205ENST00000529201 TMEM238C9JI98 176 aa7.93□□□□□ -1.14
SNRNP35-205ENST00000529201 PRLHP81277 87 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms