RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 C11orf86A6NJI1 115 aa6.7□□□□□ -1.34
SRPRA-203ENST00000528744 LINC00614P0C842 121 aa6.7□□□□□ -1.34
SRPRA-203ENST00000528744 SMCO4Q9NRQ5 59 aa6.7□□□□□ -1.34
SRPRA-203ENST00000528744 KRTAP9-6A0A140TA67 174 aa6.69□□□□□ -1.34
SRPRA-203ENST00000528744 LINC01549A6NIU2 74 aa6.69□□□□□ -1.34
SRPRA-203ENST00000528744 H3BRM9 83 aa6.69□□□□□ -1.34
SRPRA-203ENST00000528744 M0R378 163 aa6.69□□□□□ -1.34
SRPRA-203ENST00000528744 ATP5LO75964 103 aa6.69□□□□□ -1.34
SRPRA-203ENST00000528744 UBE2AP49459 152 aa6.69□□□□□ -1.34
SRPRA-203ENST00000528744 NKAPP1Q8N9T2 125 aa6.69□□□□□ -1.34
SRPRA-203ENST00000528744 ERG28Q9UKR5 140 aa6.69□□□□□ -1.34
SRPRA-203ENST00000528744 COX19Q49B96 90 aa6.68□□□□□ -1.34
SRPRA-203ENST00000528744 TMEM126AQ9H061 195 aa6.68□□□□□ -1.34
SRPRA-203ENST00000528744 TRAPPC1Q9Y5R8 145 aa6.68□□□□□ -1.34
SRPRA-203ENST00000528744 FAM19A1Q7Z5A9 133 aa6.67□□□□□ -1.34
SRPRA-203ENST00000528744 BAGE3Q86Y29 109 aa6.67□□□□□ -1.34
SRPRA-203ENST00000528744 C3orf22Q8N5N4 141 aa6.67□□□□□ -1.34
SRPRA-203ENST00000528744 PLEKHB2Q96CS7 222 aa6.67□□□□□ -1.34
SRPRA-203ENST00000528744 HBDP02042 147 aa6.66□□□□□ -1.34
SRPRA-203ENST00000528744 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
SRPRA-203ENST00000528744 RHEBQ15382 184 aa6.65□□□□□ -1.34
SRPRA-203ENST00000528744 FAM229BQ4G0N7 80 aa6.65□□□□□ -1.34
SRPRA-203ENST00000528744 TMEM170BQ5T4T1 132 aa6.64□□□□□ -1.35
SRPRA-203ENST00000528744 LINC00304Q8N9R0 145 aa6.64□□□□□ -1.35
SRPRA-203ENST00000528744 YPEL4Q96NS1 127 aa6.64□□□□□ -1.35
SRPRA-203ENST00000528744 KRTAP4-12Q9BQ66 201 aa6.64□□□□□ -1.35
SRPRA-203ENST00000528744 TMEM223A0PJW6 202 aa6.63□□□□□ -1.35
SRPRA-203ENST00000528744 H3BS24 57 aa6.63□□□□□ -1.35
SRPRA-203ENST00000528744 COX17Q14061 63 aa6.63□□□□□ -1.35
SRPRA-203ENST00000528744 CHTOPQ9Y3Y2 248 aaKnown RBP6.63□□□□□ -1.35
SRPRA-203ENST00000528744 LINC00158P58513 81 aa6.62□□□□□ -1.35
SRPRA-203ENST00000528744 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
SRPRA-203ENST00000528744 CBLN2Q8IUK8 224 aa6.62□□□□□ -1.35
SRPRA-203ENST00000528744 IGKV2D-26A0A0A0MRZ7 120 aa6.61□□□□□ -1.35
SRPRA-203ENST00000528744 APOC3P02656 99 aa6.61□□□□□ -1.35
SRPRA-203ENST00000528744 SMIM13P0DJ93 91 aa6.61□□□□□ -1.35
SRPRA-203ENST00000528744 IGLV7-46A0A075B6I9 117 aa6.6□□□□□ -1.35
SRPRA-203ENST00000528744 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
SRPRA-203ENST00000528744 SPRR4Q96PI1 79 aa6.6□□□□□ -1.35
SRPRA-203ENST00000528744 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
SRPRA-203ENST00000528744 TMA7Q9Y2S6 64 aaKnown RBP6.6□□□□□ -1.35
SRPRA-203ENST00000528744 KRTAP4-16G5E9R7 235 aaPredicted RBP6.58□□□□□ -1.36
SRPRA-203ENST00000528744 FAM19A2Q8N3H0 131 aa6.58□□□□□ -1.36
SRPRA-203ENST00000528744 IFI27L1Q96BM0 104 aa6.58□□□□□ -1.36
SRPRA-203ENST00000528744 TRAV12-1A0A0B4J245 112 aa6.57□□□□□ -1.36
SRPRA-203ENST00000528744 SPRR1AP35321 89 aa6.57□□□□□ -1.36
SRPRA-203ENST00000528744 TPRXLQ17RH7 258 aa6.57□□□□□ -1.36
SRPRA-203ENST00000528744 MIR7-3HGQ8N6C7 128 aa6.57□□□□□ -1.36
SRPRA-203ENST00000528744 DAND5Q8N907 189 aa6.57□□□□□ -1.36
SRPRA-203ENST00000528744 SMCR5Q8TEV8 140 aa6.57□□□□□ -1.36
SRPRA-203ENST00000528744 NCR3O14931 201 aa6.56□□□□□ -1.36
SRPRA-203ENST00000528744 LINC00310P59036 64 aa6.56□□□□□ -1.36
SRPRA-203ENST00000528744 TSPEAR-AS2P59090 65 aa6.56□□□□□ -1.36
SRPRA-203ENST00000528744 BOD1L2Q8IYS8 172 aa6.56□□□□□ -1.36
SRPRA-203ENST00000528744 PPDPFQ9H3Y8 114 aa6.56□□□□□ -1.36
SRPRA-203ENST00000528744 ERC2-IT1O76042 136 aa6.55□□□□□ -1.36
SRPRA-203ENST00000528744 CHCHD1Q96BP2 118 aaKnown RBP6.55□□□□□ -1.36
SRPRA-203ENST00000528744 CDIP1Q9H305 208 aa6.55□□□□□ -1.36
SRPRA-203ENST00000528744 KCNQ1DNQ9H478 68 aa6.55□□□□□ -1.36
SRPRA-203ENST00000528744 TRBV10-3A0A0K0K1G6 114 aa6.54□□□□□ -1.36
SRPRA-203ENST00000528744 SNAPINO95295 136 aa6.54□□□□□ -1.36
SRPRA-203ENST00000528744 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
SRPRA-203ENST00000528744 SVBPQ8N300 66 aa6.54□□□□□ -1.36
SRPRA-203ENST00000528744 MEIG1Q5JSS6 88 aa6.53□□□□□ -1.36
SRPRA-203ENST00000528744 LINC00337Q8N6G1 96 aa6.53□□□□□ -1.36
SRPRA-203ENST00000528744 KRTAP4-1Q9BYQ7 146 aa6.53□□□□□ -1.36
SRPRA-203ENST00000528744 NDUFA12Q9UI09 145 aa6.53□□□□□ -1.36
SRPRA-203ENST00000528744 PRYO14603 147 aa6.52□□□□□ -1.37
SRPRA-203ENST00000528744 CTAG1AP78358 180 aa6.52□□□□□ -1.37
SRPRA-203ENST00000528744 Q8NBF4 154 aa6.52□□□□□ -1.37
SRPRA-203ENST00000528744 B5MCH6 92 aa6.51□□□□□ -1.37
SRPRA-203ENST00000528744 TRGC2P03986 189 aa6.51□□□□□ -1.37
SRPRA-203ENST00000528744 SPAG11AQ6PDA7 123 aa6.51□□□□□ -1.37
SRPRA-203ENST00000528744 LOC107984156A0A0G2JMH3 177 aa6.5□□□□□ -1.37
SRPRA-203ENST00000528744 A0A0U1RQV1 116 aa6.5□□□□□ -1.37
SRPRA-203ENST00000528744 H0Y8G0 127 aa6.5□□□□□ -1.37
SRPRA-203ENST00000528744 HERV-K104P63124 156 aa6.5□□□□□ -1.37
SRPRA-203ENST00000528744 KRTAP13-3Q3SY46 172 aa6.5□□□□□ -1.37
SRPRA-203ENST00000528744 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
SRPRA-203ENST00000528744 ARL17AQ8IVW1 177 aa6.5□□□□□ -1.37
SRPRA-203ENST00000528744 PMCHL2Q9BQD1 86 aa6.5□□□□□ -1.37
SRPRA-203ENST00000528744 Q9BRP9 147 aa6.5□□□□□ -1.37
SRPRA-203ENST00000528744 ATP6V1G1O75348 118 aa6.49□□□□□ -1.37
SRPRA-203ENST00000528744 HSBP1O75506 76 aa6.49□□□□□ -1.37
SRPRA-203ENST00000528744 GAGE2AQ6NT46 116 aa6.49□□□□□ -1.37
SRPRA-203ENST00000528744 MYMXA0A1B0GTQ4 84 aa6.48□□□□□ -1.37
SRPRA-203ENST00000528744 ETDCA0A1B0GVM5 59 aa6.48□□□□□ -1.37
SRPRA-203ENST00000528744 LEPROTO15243 131 aa6.48□□□□□ -1.37
SRPRA-203ENST00000528744 SERF1AO75920 110 aa6.48□□□□□ -1.37
SRPRA-203ENST00000528744 NDUFA5Q16718 116 aa6.48□□□□□ -1.37
SRPRA-203ENST00000528744 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
SRPRA-203ENST00000528744 SOSTDC1Q6X4U4 206 aa6.48□□□□□ -1.37
SRPRA-203ENST00000528744 ADAMTSL4-AS1Q5T5F5 129 aa6.47□□□□□ -1.37
SRPRA-203ENST00000528744 J3QQQ9 107 aa6.46□□□□□ -1.38
SRPRA-203ENST00000528744 LEPROTL1O95214 131 aa6.46□□□□□ -1.38
SRPRA-203ENST00000528744 FABP4P15090 132 aa6.46□□□□□ -1.38
SRPRA-203ENST00000528744 FP248Q71RG6 208 aaPredicted RBP6.46□□□□□ -1.38
SRPRA-203ENST00000528744 ZNF706Q9Y5V0 76 aaPredicted RBP6.46□□□□□ -1.38
SRPRA-203ENST00000528744 IGLV9-49A0A0B4J1Y8 123 aa6.45□□□□□ -1.38
SRPRA-203ENST00000528744 DDTP30046 118 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms