RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 NSD1Q96L73 2696 aaPredicted RBP12.61□□□□□ -0.39
LTBP3-210ENST00000528516 CCKP06307 115 aa12.6□□□□□ -0.39
LTBP3-210ENST00000528516 TRBV6-4A0A1B0GX49 114 aa12.6□□□□□ -0.39
LTBP3-210ENST00000528516 CSMD2Q7Z408 3487 aa12.59□□□□□ -0.39
LTBP3-210ENST00000528516 A0A0U1RQV1 116 aa12.59□□□□□ -0.39
LTBP3-210ENST00000528516 LY6G6DO95868 133 aa12.59□□□□□ -0.39
LTBP3-210ENST00000528516 JMJD7-PLA2G4BH0Y9G9 81 aa12.58□□□□□ -0.4
LTBP3-210ENST00000528516 UBE2BP63146 152 aa12.58□□□□□ -0.4
LTBP3-210ENST00000528516 A0A096LNI7 61 aa12.57□□□□□ -0.4
LTBP3-210ENST00000528516 NTM-AS1Q6ZSK4 140 aa12.57□□□□□ -0.4
LTBP3-210ENST00000528516 BRK1Q8WUW1 75 aa12.57□□□□□ -0.4
LTBP3-210ENST00000528516 IGKV2-24A0A0C4DH68 120 aa12.57□□□□□ -0.4
LTBP3-210ENST00000528516 UNQ6190/PRO20217Q6UXQ8 127 aa12.57□□□□□ -0.4
LTBP3-210ENST00000528516 RETNQ9HD89 108 aa12.56□□□□□ -0.4
LTBP3-210ENST00000528516 LINC00336Q6ZUF6 198 aa12.56□□□□□ -0.4
LTBP3-210ENST00000528516 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
LTBP3-210ENST00000528516 ATP5EP2Q5VTU8 51 aa12.54□□□□□ -0.4
LTBP3-210ENST00000528516 PRO0628Q9UI54 55 aa12.54□□□□□ -0.4
LTBP3-210ENST00000528516 SERP1Q9Y6X1 66 aa12.54□□□□□ -0.4
LTBP3-210ENST00000528516 Q6ZQY7 126 aa12.54□□□□□ -0.4
LTBP3-210ENST00000528516 NDUFC2-KCTD14E9PQ53 114 aa12.53□□□□□ -0.4
LTBP3-210ENST00000528516 F8WEM9 126 aa12.53□□□□□ -0.4
LTBP3-210ENST00000528516 C6orf223Q8N319 242 aa12.53□□□□□ -0.4
LTBP3-210ENST00000528516 Q8N3U1 123 aa12.53□□□□□ -0.4
LTBP3-210ENST00000528516 C11orf72Q8NBR9 251 aa12.53□□□□□ -0.4
LTBP3-210ENST00000528516 TMEM256-PLSCR3K7ERE1 68 aa12.52□□□□□ -0.4
LTBP3-210ENST00000528516 RMI2Q96E14 147 aa12.52□□□□□ -0.41
LTBP3-210ENST00000528516 HIVEP1P15822 2718 aa12.51□□□□□ -0.41
LTBP3-210ENST00000528516 DIRC1Q969H9 104 aa12.51□□□□□ -0.41
LTBP3-210ENST00000528516 ETDCA0A1B0GVM5 59 aa12.5□□□□□ -0.41
LTBP3-210ENST00000528516 VPS13CQ709C8 3753 aa12.5□□□□□ -0.41
LTBP3-210ENST00000528516 MPLKIPQ8TAP9 179 aa12.49□□□□□ -0.41
LTBP3-210ENST00000528516 IGLV1-51P01701 117 aa12.49□□□□□ -0.41
LTBP3-210ENST00000528516 CYSRT1A8MQ03 144 aa12.47□□□□□ -0.41
LTBP3-210ENST00000528516 TRAV7A0A075B6U4 112 aa12.46□□□□□ -0.41
LTBP3-210ENST00000528516 C3orf84H3BNL1 204 aa12.46□□□□□ -0.41
LTBP3-210ENST00000528516 SMIM26A0A096LP01 95 aa12.46□□□□□ -0.41
LTBP3-210ENST00000528516 NREPQ16612 68 aa12.46□□□□□ -0.42
LTBP3-210ENST00000528516 Q8N814 137 aa12.45□□□□□ -0.42
LTBP3-210ENST00000528516 DEFB131BA0A096LNP1 70 aa12.45□□□□□ -0.42
LTBP3-210ENST00000528516 CD164L2Q6UWJ8 174 aa12.44□□□□□ -0.42
LTBP3-210ENST00000528516 BAHCC1Q9P281 2608 aa12.44□□□□□ -0.42
LTBP3-210ENST00000528516 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.44□□□□□ -0.42
LTBP3-210ENST00000528516 IGHV4-30-4P0DP06 118 aa12.44□□□□□ -0.42
LTBP3-210ENST00000528516 RPL37AP8A6NKH3 93 aa12.43□□□□□ -0.42
LTBP3-210ENST00000528516 KPRPQ5T749 579 aaPredicted RBP12.43□□□□□ -0.42
LTBP3-210ENST00000528516 C11orf45Q8TAV5 145 aa12.43□□□□□ -0.42
LTBP3-210ENST00000528516 OBSCN-AS1Q96MR7 158 aa12.43□□□□□ -0.42
LTBP3-210ENST00000528516 HIGD2AQ9BW72 106 aa12.43□□□□□ -0.42
LTBP3-210ENST00000528516 APCP25054 2843 aa12.43□□□□□ -0.42
LTBP3-210ENST00000528516 COX7BP24311 80 aa12.43□□□□□ -0.42
LTBP3-210ENST00000528516 H7BZZ5 65 aa12.42□□□□□ -0.42
LTBP3-210ENST00000528516 TRAV10A0A0B4J240 114 aa12.42□□□□□ -0.42
LTBP3-210ENST00000528516 LYRM9A8MSI8 78 aa12.41□□□□□ -0.42
LTBP3-210ENST00000528516 NANOS2P60321 138 aaKnown RBP12.41□□□□□ -0.42
LTBP3-210ENST00000528516 LINC00474Q9P2X8 69 aa12.41□□□□□ -0.42
LTBP3-210ENST00000528516 A0A087WZ39 114 aa12.41□□□□□ -0.42
LTBP3-210ENST00000528516 TRBV7-6A0A0J9YX20 115 aa12.38□□□□□ -0.43
LTBP3-210ENST00000528516 LINC01547P58512 204 aaPredicted RBP12.38□□□□□ -0.43
LTBP3-210ENST00000528516 C1orf195Q5TG92 126 aa12.36□□□□□ -0.43
LTBP3-210ENST00000528516 FUSP35637 526 aaKnown RBP eCLIP12.36□□□□□ -0.43
LTBP3-210ENST00000528516 Q6ZTC4 211 aa12.36□□□□□ -0.43
LTBP3-210ENST00000528516 IGHV3OR16-9A0A0B4J2B5 98 aa12.35□□□□□ -0.43
LTBP3-210ENST00000528516 CELA1Q9UNI1 258 aa12.35□□□□□ -0.43
LTBP3-210ENST00000528516 Q6ZVQ6 151 aa12.35□□□□□ -0.43
LTBP3-210ENST00000528516 V9GYY9 64 aa12.35□□□□□ -0.43
LTBP3-210ENST00000528516 TRBV10-3A0A0K0K1G6 114 aa12.35□□□□□ -0.43
LTBP3-210ENST00000528516 NIPBLQ6KC79 2804 aaeCLIP12.34□□□□□ -0.43
LTBP3-210ENST00000528516 FAM19A3Q7Z5A8 133 aa12.34□□□□□ -0.43
LTBP3-210ENST00000528516 MIFP14174 115 aa12.33□□□□□ -0.44
LTBP3-210ENST00000528516 WFDC10BQ8IUB3 73 aa12.33□□□□□ -0.44
LTBP3-210ENST00000528516 Q8IZM0 81 aa12.32□□□□□ -0.44
LTBP3-210ENST00000528516 ZFHX3Q15911 3703 aa12.32□□□□□ -0.44
LTBP3-210ENST00000528516 MXRA5Q9NR99 2828 aa12.32□□□□□ -0.44
LTBP3-210ENST00000528516 PRR4Q16378 134 aa12.32□□□□□ -0.44
LTBP3-210ENST00000528516 A0A0J9YWU9 116 aa12.31□□□□□ -0.44
LTBP3-210ENST00000528516 TENM4Q6N022 2769 aa12.31□□□□□ -0.44
LTBP3-210ENST00000528516 TM2D3Q9BRN9 247 aa12.31□□□□□ -0.44
LTBP3-210ENST00000528516 SYCNQ0VAF6 134 aa12.31□□□□□ -0.44
LTBP3-210ENST00000528516 A0A096LNT2 108 aa12.3□□□□□ -0.44
LTBP3-210ENST00000528516 M0R2N4 97 aa12.3□□□□□ -0.44
LTBP3-210ENST00000528516 C10orf25Q5T742 122 aa12.3□□□□□ -0.44
LTBP3-210ENST00000528516 LYPD5Q6UWN5 251 aa12.3□□□□□ -0.44
LTBP3-210ENST00000528516 LELP1Q5T871 98 aa12.29□□□□□ -0.44
LTBP3-210ENST00000528516 BPY2O14599 106 aa12.29□□□□□ -0.44
LTBP3-210ENST00000528516 FP248Q71RG6 208 aaPredicted RBP12.29□□□□□ -0.44
LTBP3-210ENST00000528516 KLKP1Q107X0 134 aa12.28□□□□□ -0.44
LTBP3-210ENST00000528516 Q6ZQT0 140 aa12.28□□□□□ -0.44
LTBP3-210ENST00000528516 NDUFC1O43677 76 aa12.27□□□□□ -0.45
LTBP3-210ENST00000528516 ZNF73O43830 326 aaPredicted RBP12.27□□□□□ -0.45
LTBP3-210ENST00000528516 NDUFS5O43920 106 aa12.26□□□□□ -0.45
LTBP3-210ENST00000528516 Q8N9L7 120 aa12.25□□□□□ -0.45
LTBP3-210ENST00000528516 LINC00575Q6W349 94 aa12.24□□□□□ -0.45
LTBP3-210ENST00000528516 TMEM254Q8TBM7 123 aa12.24□□□□□ -0.45
LTBP3-210ENST00000528516 LRCOL1A6NCL2 159 aa12.24□□□□□ -0.45
LTBP3-210ENST00000528516 SEC61GP60059 68 aa12.23□□□□□ -0.45
LTBP3-210ENST00000528516 CDK2AP2O75956 126 aa12.23□□□□□ -0.45
LTBP3-210ENST00000528516 CR1P17927 2039 aa12.22□□□□□ -0.45
LTBP3-210ENST00000528516 ATP5EP56381 51 aaPredicted RBP12.2□□□□□ -0.46
LTBP3-210ENST00000528516 UBE2AP49459 152 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms