RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 SCXQ7RTU7 201 aa9.95□□□□□ -0.82
CAPN1-214ENST00000528165 TM2D3Q9BRN9 247 aa9.95□□□□□ -0.82
CAPN1-214ENST00000528165 MYO18BQ8IUG5 2567 aa9.95□□□□□ -0.82
CAPN1-214ENST00000528165 AKAP9Q99996 3911 aa9.95□□□□□ -0.82
CAPN1-214ENST00000528165 PTPN13Q12923 2485 aa9.94□□□□□ -0.82
CAPN1-214ENST00000528165 CENPEQ02224 2701 aa9.94□□□□□ -0.82
CAPN1-214ENST00000528165 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
CAPN1-214ENST00000528165 NAV2Q8IVL1 2488 aa9.94□□□□□ -0.82
CAPN1-214ENST00000528165 FN1P02751 2386 aaKnown RBP9.94□□□□□ -0.82
CAPN1-214ENST00000528165 SETD2Q9BYW2 2564 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-214ENST00000528165 SONP18583 2426 aaKnown RBP9.93□□□□□ -0.82
CAPN1-214ENST00000528165 FAM208BQ5VWN6 2430 aa9.93□□□□□ -0.82
CAPN1-214ENST00000528165 DIRC1Q969H9 104 aa9.93□□□□□ -0.82
CAPN1-214ENST00000528165 FP248Q71RG6 208 aaPredicted RBP9.92□□□□□ -0.82
CAPN1-214ENST00000528165 NIPBLQ6KC79 2804 aaeCLIP9.92□□□□□ -0.82
CAPN1-214ENST00000528165 TRBV7-4A0A0J9YYF1 115 aa9.92□□□□□ -0.82
CAPN1-214ENST00000528165 MIFP14174 115 aa9.92□□□□□ -0.82
CAPN1-214ENST00000528165 CYSRT1A8MQ03 144 aa9.91□□□□□ -0.82
CAPN1-214ENST00000528165 DEFB113Q30KQ7 82 aa9.91□□□□□ -0.82
CAPN1-214ENST00000528165 TRBV7-6A0A0J9YX20 115 aa9.91□□□□□ -0.82
CAPN1-214ENST00000528165 ATP5EP56381 51 aaPredicted RBP9.91□□□□□ -0.82
CAPN1-214ENST00000528165 NREPQ16612 68 aa9.91□□□□□ -0.82
CAPN1-214ENST00000528165 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.91□□□□□ -0.82
CAPN1-214ENST00000528165 A0A0J9YWU9 116 aa9.9□□□□□ -0.82
CAPN1-214ENST00000528165 IGHV4-30-4P0DP06 118 aa9.9□□□□□ -0.82
CAPN1-214ENST00000528165 C16orf95Q9H693 158 aa9.9□□□□□ -0.82
CAPN1-214ENST00000528165 KRTAP10-9P60411 292 aa9.9□□□□□ -0.82
CAPN1-214ENST00000528165 ESM1Q9NQ30 184 aa9.9□□□□□ -0.82
CAPN1-214ENST00000528165 PIEZO1Q92508 2521 aa9.89□□□□□ -0.83
CAPN1-214ENST00000528165 BPY2O14599 106 aa9.88□□□□□ -0.83
CAPN1-214ENST00000528165 COX7BP24311 80 aa9.88□□□□□ -0.83
CAPN1-214ENST00000528165 ZNF73O43830 326 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-214ENST00000528165 NF1P21359 2839 aa9.88□□□□□ -0.83
CAPN1-214ENST00000528165 ABCA12Q86UK0 2595 aa9.88□□□□□ -0.83
CAPN1-214ENST00000528165 TMEM254Q8TBM7 123 aa9.88□□□□□ -0.83
CAPN1-214ENST00000528165 X6R8D5 127 aa9.88□□□□□ -0.83
CAPN1-214ENST00000528165 XAGE1AQ9HD64 81 aa9.87□□□□□ -0.83
CAPN1-214ENST00000528165 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
CAPN1-214ENST00000528165 CACNA1AO00555 2505 aa9.87□□□□□ -0.83
CAPN1-214ENST00000528165 WFDC11Q8NEX6 87 aa9.86□□□□□ -0.83
CAPN1-214ENST00000528165 C1orf43Q9BWL3 253 aa9.86□□□□□ -0.83
CAPN1-214ENST00000528165 ZFYVE26Q68DK2 2539 aa9.86□□□□□ -0.83
CAPN1-214ENST00000528165 ELOF1P60002 83 aaKnown RBP9.84□□□□□ -0.83
CAPN1-214ENST00000528165 LYRM9A8MSI8 78 aa9.84□□□□□ -0.83
CAPN1-214ENST00000528165 ERC2-IT1O76042 136 aa9.84□□□□□ -0.83
CAPN1-214ENST00000528165 GVQW2A0A096LPI5 108 aaPredicted RBP9.83□□□□□ -0.84
CAPN1-214ENST00000528165 DEFB4AO15263 64 aa9.83□□□□□ -0.84
CAPN1-214ENST00000528165 C6orf48Q9UBA6 75 aa9.83□□□□□ -0.84
CAPN1-214ENST00000528165 IGSF10Q6WRI0 2623 aa9.82□□□□□ -0.84
CAPN1-214ENST00000528165 Q8N9L7 120 aa9.82□□□□□ -0.84
CAPN1-214ENST00000528165 KLK12Q9UKR0 248 aa9.82□□□□□ -0.84
CAPN1-214ENST00000528165 GCN1Q92616 2671 aaKnown RBP9.82□□□□□ -0.84
CAPN1-214ENST00000528165 NBEAL2Q6ZNJ1 2754 aa9.8□□□□□ -0.84
CAPN1-214ENST00000528165 DAD1P61803 113 aa9.8□□□□□ -0.84
CAPN1-214ENST00000528165 APCP25054 2843 aa9.79□□□□□ -0.84
CAPN1-214ENST00000528165 PRYO14603 147 aa9.79□□□□□ -0.84
CAPN1-214ENST00000528165 IGKV4-1P06312 121 aa9.79□□□□□ -0.84
CAPN1-214ENST00000528165 KRTAP1-3Q8IUG1 177 aa9.79□□□□□ -0.84
CAPN1-214ENST00000528165 BRK1Q8WUW1 75 aa9.78□□□□□ -0.84
CAPN1-214ENST00000528165 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
CAPN1-214ENST00000528165 CCDC168Q8NDH2 2452 aa9.78□□□□□ -0.84
CAPN1-214ENST00000528165 LELP1Q5T871 98 aa9.78□□□□□ -0.84
CAPN1-214ENST00000528165 PRR34Q9NV39 138 aa9.78□□□□□ -0.84
CAPN1-214ENST00000528165 OCR1Q9BZK8 76 aa9.77□□□□□ -0.85
CAPN1-214ENST00000528165 A0A0U1RQV1 116 aa9.77□□□□□ -0.85
CAPN1-214ENST00000528165 VPREB1P12018 145 aa9.76□□□□□ -0.85
CAPN1-214ENST00000528165 DEFB135Q30KP9 77 aa9.76□□□□□ -0.85
CAPN1-214ENST00000528165 MPLKIPQ8TAP9 179 aa9.76□□□□□ -0.85
CAPN1-214ENST00000528165 FUSP35637 526 aaKnown RBP eCLIP9.76□□□□□ -0.85
CAPN1-214ENST00000528165 FAM229BQ4G0N7 80 aa9.76□□□□□ -0.85
CAPN1-214ENST00000528165 ITPR3Q14573 2671 aa9.76□□□□□ -0.85
CAPN1-214ENST00000528165 M0R378 163 aa9.75□□□□□ -0.85
CAPN1-214ENST00000528165 HTN3P15516 51 aa9.75□□□□□ -0.85
CAPN1-214ENST00000528165 LINC00528Q8N1L1 170 aa9.75□□□□□ -0.85
CAPN1-214ENST00000528165 HIGD2BQ4VC39 106 aa9.75□□□□□ -0.85
CAPN1-214ENST00000528165 ZNF469Q96JG9 3925 aaPredicted RBP9.75□□□□□ -0.85
CAPN1-214ENST00000528165 PRB1P04280 392 aa9.74□□□□□ -0.85
CAPN1-214ENST00000528165 CAMK2N2Q96S95 79 aa9.74□□□□□ -0.85
CAPN1-214ENST00000528165 C3orf84H3BNL1 204 aa9.73□□□□□ -0.85
CAPN1-214ENST00000528165 ESRGQ1W209 222 aa9.73□□□□□ -0.85
CAPN1-214ENST00000528165 ZNF462Q96JM2 2506 aa9.72□□□□□ -0.85
CAPN1-214ENST00000528165 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
CAPN1-214ENST00000528165 CELA1Q9UNI1 258 aa9.72□□□□□ -0.85
CAPN1-214ENST00000528165 EGFEM1PQ0D2K5 195 aa9.7□□□□□ -0.86
CAPN1-214ENST00000528165 Q6ZTC4 211 aa9.7□□□□□ -0.86
CAPN1-214ENST00000528165 FLNAP21333 2647 aaKnown RBP9.7□□□□□ -0.86
CAPN1-214ENST00000528165 MTORP42345 2549 aa9.68□□□□□ -0.86
CAPN1-214ENST00000528165 DEFB105AQ8NG35 78 aa9.68□□□□□ -0.86
CAPN1-214ENST00000528165 SPART-AS1P0CW21 52 aa9.67□□□□□ -0.86
CAPN1-214ENST00000528165 APOC4P55056 127 aa9.67□□□□□ -0.86
CAPN1-214ENST00000528165 Q6ZRU5 148 aa9.67□□□□□ -0.86
CAPN1-214ENST00000528165 FAM30AQ9NZY2 134 aa9.66□□□□□ -0.86
CAPN1-214ENST00000528165 SMIM29Q86T20 159 aa9.65□□□□□ -0.86
CAPN1-214ENST00000528165 Q8NAQ8 132 aa9.65□□□□□ -0.86
CAPN1-214ENST00000528165 KPRPQ5T749 579 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-214ENST00000528165 C1orf195Q5TG92 126 aa9.64□□□□□ -0.87
CAPN1-214ENST00000528165 Q8N377 158 aa9.63□□□□□ -0.87
CAPN1-214ENST00000528165 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
CAPN1-214ENST00000528165 KRTAP10-3P60369 221 aa9.62□□□□□ -0.87
CAPN1-214ENST00000528165 ACANP16112 2415 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms