RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 C10orf25Q5T742 122 aa12.42□□□□□ -0.42
SMPD1-203ENST00000527275 HYDINQ4G0P3 5121 aa12.41□□□□□ -0.42
SMPD1-203ENST00000527275 IGKV2-28A0A075B6P5 120 aa12.41□□□□□ -0.42
SMPD1-203ENST00000527275 TRAV13-2A0A0B4J235 113 aa12.41□□□□□ -0.42
SMPD1-203ENST00000527275 IGKV2D-28P01615 120 aa12.41□□□□□ -0.42
SMPD1-203ENST00000527275 NTN5Q8WTR8 489 aaPredicted RBP12.4□□□□□ -0.42
SMPD1-203ENST00000527275 LINC00337Q8N6G1 96 aa12.39□□□□□ -0.43
SMPD1-203ENST00000527275 SACSQ9NZJ4 4579 aa12.38□□□□□ -0.43
SMPD1-203ENST00000527275 ATXN8Q156A1 80 aa12.38□□□□□ -0.43
SMPD1-203ENST00000527275 ZNF561-AS1K7EIQ3 104 aa12.37□□□□□ -0.43
SMPD1-203ENST00000527275 DNAH2Q9P225 4427 aa12.37□□□□□ -0.43
SMPD1-203ENST00000527275 PSCAO43653 123 aa12.36□□□□□ -0.43
SMPD1-203ENST00000527275 HIGD2BQ4VC39 106 aa12.36□□□□□ -0.43
SMPD1-203ENST00000527275 GVQW2A0A096LPI5 108 aaPredicted RBP12.36□□□□□ -0.43
SMPD1-203ENST00000527275 SMCPP49901 116 aaPredicted RBP12.36□□□□□ -0.43
SMPD1-203ENST00000527275 Q6ZRN7 208 aaPredicted RBP12.36□□□□□ -0.43
SMPD1-203ENST00000527275 LCE6AA0A183 80 aa12.35□□□□□ -0.43
SMPD1-203ENST00000527275 ETDBQ3ZM63 59 aa12.35□□□□□ -0.43
SMPD1-203ENST00000527275 C15orf56Q8N910 161 aa12.35□□□□□ -0.43
SMPD1-203ENST00000527275 CLEC2BQ92478 149 aa12.34□□□□□ -0.43
SMPD1-203ENST00000527275 C6orf48Q9UBA6 75 aa12.34□□□□□ -0.43
SMPD1-203ENST00000527275 LECT2O14960 151 aa12.33□□□□□ -0.44
SMPD1-203ENST00000527275 KMT2CQ8NEZ4 4911 aaKnown RBP12.33□□□□□ -0.44
SMPD1-203ENST00000527275 DNAH6Q9C0G6 4158 aa12.33□□□□□ -0.44
SMPD1-203ENST00000527275 C1orf134Q5TEV5 83 aa12.33□□□□□ -0.44
SMPD1-203ENST00000527275 CAMK2N2Q96S95 79 aa12.33□□□□□ -0.44
SMPD1-203ENST00000527275 C9JAW5 83 aa12.32□□□□□ -0.44
SMPD1-203ENST00000527275 LINC01620Q4KN68 170 aa12.32□□□□□ -0.44
SMPD1-203ENST00000527275 USP17L23D6RBM5 183 aa12.32□□□□□ -0.44
SMPD1-203ENST00000527275 NDUFC2O95298 119 aa12.32□□□□□ -0.44
SMPD1-203ENST00000527275 RPL28P46779 137 aaKnown RBP12.32□□□□□ -0.44
SMPD1-203ENST00000527275 OR13C6PQ8NH95 151 aa12.31□□□□□ -0.44
SMPD1-203ENST00000527275 C2orf48Q96LS8 159 aa12.31□□□□□ -0.44
SMPD1-203ENST00000527275 LST1O00453 97 aa12.3□□□□□ -0.44
SMPD1-203ENST00000527275 SLC25A20O43772 301 aa12.3□□□□□ -0.44
SMPD1-203ENST00000527275 PRR3P79522 188 aaKnown RBP12.3□□□□□ -0.44
SMPD1-203ENST00000527275 SMIM11BQ8TCY0 68 aa12.29□□□□□ -0.44
SMPD1-203ENST00000527275 Q6ZRU5 148 aa12.28□□□□□ -0.44
SMPD1-203ENST00000527275 LRCOL1A6NCL2 159 aa12.27□□□□□ -0.45
SMPD1-203ENST00000527275 J3QR89 54 aa12.26□□□□□ -0.45
SMPD1-203ENST00000527275 TRBV10-2A0A0K0K1G8 114 aa12.26□□□□□ -0.45
SMPD1-203ENST00000527275 F8WDY8 70 aa12.26□□□□□ -0.45
SMPD1-203ENST00000527275 Q8NDZ9 215 aa12.26□□□□□ -0.45
SMPD1-203ENST00000527275 M0QXV9 152 aa12.25□□□□□ -0.45
SMPD1-203ENST00000527275 ANKRD29Q8N6D5 301 aa12.25□□□□□ -0.45
SMPD1-203ENST00000527275 SYCNQ0VAF6 134 aa12.23□□□□□ -0.45
SMPD1-203ENST00000527275 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
SMPD1-203ENST00000527275 TMEM126AQ9H061 195 aa12.23□□□□□ -0.45
SMPD1-203ENST00000527275 NCR3O14931 201 aa12.22□□□□□ -0.45
SMPD1-203ENST00000527275 RTL8CO15255 209 aa12.22□□□□□ -0.45
SMPD1-203ENST00000527275 XAGE1AQ9HD64 81 aa12.22□□□□□ -0.45
SMPD1-203ENST00000527275 SLPIP03973 132 aa12.22□□□□□ -0.45
SMPD1-203ENST00000527275 LINC01600Q96MT4 127 aa12.22□□□□□ -0.45
SMPD1-203ENST00000527275 FAM218AQ96MZ4 157 aa12.22□□□□□ -0.45
SMPD1-203ENST00000527275 DNAH17Q9UFH2 4485 aa12.22□□□□□ -0.45
SMPD1-203ENST00000527275 A0A087WTM6 91 aa12.2□□□□□ -0.46
SMPD1-203ENST00000527275 NDUFC2-KCTD14E9PQ53 114 aa12.2□□□□□ -0.46
SMPD1-203ENST00000527275 H0YGX0 51 aa12.2□□□□□ -0.46
SMPD1-203ENST00000527275 TRACP01848 142 aa12.2□□□□□ -0.46
SMPD1-203ENST00000527275 H3BT86 120 aa12.19□□□□□ -0.46
SMPD1-203ENST00000527275 TNP2Q05952 138 aa12.19□□□□□ -0.46
SMPD1-203ENST00000527275 C14orf177Q52M58 125 aa12.19□□□□□ -0.46
SMPD1-203ENST00000527275 S100A7L2Q5SY68 101 aa12.19□□□□□ -0.46
SMPD1-203ENST00000527275 CARD19Q96LW7 228 aa12.19□□□□□ -0.46
SMPD1-203ENST00000527275 SIGMAR1Q99720 223 aa12.19□□□□□ -0.46
SMPD1-203ENST00000527275 FRAS1Q86XX4 4008 aa12.19□□□□□ -0.46
SMPD1-203ENST00000527275 RYR2Q92736 4967 aa12.18□□□□□ -0.46
SMPD1-203ENST00000527275 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.18□□□□□ -0.46
SMPD1-203ENST00000527275 PPDPFLQ8WWR9 84 aa12.18□□□□□ -0.46
SMPD1-203ENST00000527275 Q8N814 137 aa12.17□□□□□ -0.46
SMPD1-203ENST00000527275 RPL18AQ02543 176 aaKnown RBP12.16□□□□□ -0.46
SMPD1-203ENST00000527275 GAGE2EQ4V326 116 aa12.16□□□□□ -0.46
SMPD1-203ENST00000527275 GAGE2DQ9UEU5 116 aa12.16□□□□□ -0.46
SMPD1-203ENST00000527275 Q6ZRP5 223 aa12.16□□□□□ -0.46
SMPD1-203ENST00000527275 A0A087WYN8 130 aa12.15□□□□□ -0.47
SMPD1-203ENST00000527275 FAT2Q9NYQ8 4349 aa12.15□□□□□ -0.47
SMPD1-203ENST00000527275 IGLV6-57P01721 117 aa12.13□□□□□ -0.47
SMPD1-203ENST00000527275 CNBPP62633 177 aaKnown RBP12.13□□□□□ -0.47
SMPD1-203ENST00000527275 VPREB1P12018 145 aa12.12□□□□□ -0.47
SMPD1-203ENST00000527275 BAALC-AS2P0C853 105 aa12.11□□□□□ -0.47
SMPD1-203ENST00000527275 DNAL4O96015 105 aa12.11□□□□□ -0.47
SMPD1-203ENST00000527275 TLX1NBP0CAT3 122 aa12.11□□□□□ -0.47
SMPD1-203ENST00000527275 FUSP35637 526 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMPD1-203ENST00000527275 TEX49A0A1B0GTD5 131 aa12.1□□□□□ -0.47
SMPD1-203ENST00000527275 C6orf99Q4VX62 202 aa12.1□□□□□ -0.47
SMPD1-203ENST00000527275 CDIP1Q9H305 208 aa12.09□□□□□ -0.47
SMPD1-203ENST00000527275 TRBV10-3A0A0K0K1G6 114 aa12.09□□□□□ -0.47
SMPD1-203ENST00000527275 C9orf129Q5T035 196 aaKnown RBP12.09□□□□□ -0.47
SMPD1-203ENST00000527275 RYR3Q15413 4870 aa12.07□□□□□ -0.48
SMPD1-203ENST00000527275 M0R378 163 aa12.07□□□□□ -0.48
SMPD1-203ENST00000527275 SCGB1A1P11684 91 aa12.07□□□□□ -0.48
SMPD1-203ENST00000527275 A0A1B0GX51 115 aa12.05□□□□□ -0.48
SMPD1-203ENST00000527275 C9orf163Q8N9P6 203 aa12.05□□□□□ -0.48
SMPD1-203ENST00000527275 TRAV23DV6A0A075B6W5 121 aa12.05□□□□□ -0.48
SMPD1-203ENST00000527275 DNAH11Q96DT5 4516 aa12.04□□□□□ -0.48
SMPD1-203ENST00000527275 KRTAP10-2P60368 255 aa12.03□□□□□ -0.48
SMPD1-203ENST00000527275 LINC00336Q6ZUF6 198 aa12.03□□□□□ -0.48
SMPD1-203ENST00000527275 C22orf24Q9Y442 160 aa12.03□□□□□ -0.48
SMPD1-203ENST00000527275 HECTD4Q9Y4D8 3996 aa12.02□□□□□ -0.48
SMPD1-203ENST00000527275 IGLV5-52A0A0A0MRZ9 124 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms