RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 CHD3Q12873 2000 aaKnown RBP1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 A0A1B0GWA3 101 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 H0YGG7 62 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 H3BQ15 152 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 H3BSH0 61 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 SSSCA1O60232 199 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 IGKV1-17P01599 117 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 Q5BKY6 102 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 C15orf53Q8NAA6 179 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 LCN9Q8WX39 176 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 IFI27L1Q96BM0 104 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 VAMP8Q9BV40 100 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 ATG5Q9H1Y0 275 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 MRPL35Q9NZE8 188 aaKnown RBP1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 KLK9Q9UKQ9 250 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 C22orf24Q9Y442 160 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 RYR2Q92736 4967 aa1.88□□□□□ -2.11
CLNS1A-208ENST00000527265 DOCK11Q5JSL3 2073 aa1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 TNRC6AQ8NDV7 1962 aaKnown RBP1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 IGKV3-7A0A075B6H7 116 aa1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 TRBV10-1A0A0K0K1A3 114 aa1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 TRBV6-5A0A0K0K1A5 114 aa1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 NUPR2A6NF83 97 aa1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 HCG22E2RYF7 251 aa1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 J3QRE1 110 aa1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 ATP5EP56381 51 aaPredicted RBP1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 TSLPQ969D9 159 aa1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 ODF3Q96PU9 254 aa1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 LINC00474Q9P2X8 69 aa1.87□□□□□ -2.11
CLNS1A-208ENST00000527265 INTS1Q8N201 2190 aaKnown RBP1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 USF3Q68DE3 2245 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 TRAV12-3A0A0B4J271 114 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 TRBV10-3A0A0K0K1G6 114 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 C10orf142B7Z368 130 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 PIN1P1O15428 100 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 PPYP01298 95 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 IGHV3-30P01768 117 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 CCKP06307 115 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 IGLC1P0CG04 106 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 IGHV3-30-5P0DP03 117 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 RPS27P42677 84 aaKnown RBP1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 SMIM11AP58511 58 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 SPRNQ5BIV9 151 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 NDUFA11Q86Y39 141 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 DMAC1Q96GE9 116 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 AMELYQ99218 206 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 PRO1933Q9H354 126 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 CADP27708 2225 aa1.86□□□□□ -2.11
CLNS1A-208ENST00000527265 ZANQ9Y493 2812 aa1.85□□□□□ -2.11
CLNS1A-208ENST00000527265 HERC2O95714 4834 aa1.85□□□□□ -2.11
CLNS1A-208ENST00000527265 TRAV13-2A0A0B4J235 113 aa1.85□□□□□ -2.11
CLNS1A-208ENST00000527265 JMJD7-PLA2G4BH0Y9G9 81 aa1.85□□□□□ -2.11
CLNS1A-208ENST00000527265 IGLV3-1P01715 115 aa1.85□□□□□ -2.11
CLNS1A-208ENST00000527265 DEFB133Q30KQ1 61 aa1.85□□□□□ -2.11
CLNS1A-208ENST00000527265 LINC01590Q5TEZ4 76 aa1.85□□□□□ -2.11
CLNS1A-208ENST00000527265 WFDC10AQ9H1F0 79 aa1.85□□□□□ -2.11
CLNS1A-208ENST00000527265 CMC2Q9NRP2 79 aa1.85□□□□□ -2.11
CLNS1A-208ENST00000527265 PLCE1Q9P212 2302 aa1.85□□□□□ -2.11
CLNS1A-208ENST00000527265 ZGRF1Q86YA3 2104 aa1.84□□□□□ -2.11
CLNS1A-208ENST00000527265 ARFGEF3Q5TH69 2177 aa1.84□□□□□ -2.11
CLNS1A-208ENST00000527265 SPTY2D1-AS1A0A0U1RR47 76 aa1.84□□□□□ -2.11
CLNS1A-208ENST00000527265 PDE6GP18545 87 aa1.84□□□□□ -2.11
CLNS1A-208ENST00000527265 CCL8P80075 99 aa1.84□□□□□ -2.11
CLNS1A-208ENST00000527265 Q0VG73 95 aa1.84□□□□□ -2.11
CLNS1A-208ENST00000527265 MPV17LQ2QL34 196 aa1.84□□□□□ -2.11
CLNS1A-208ENST00000527265 PYY3Q5JQD4 70 aa1.84□□□□□ -2.11
CLNS1A-208ENST00000527265 SVEP1Q4LDE5 3571 aa1.84□□□□□ -2.12
CLNS1A-208ENST00000527265 TENM2Q9NT68 2774 aa1.83□□□□□ -2.12
CLNS1A-208ENST00000527265 hADV29S1A0JD25 119 aa1.83□□□□□ -2.12
CLNS1A-208ENST00000527265 SIX6O95475 246 aa1.83□□□□□ -2.12
CLNS1A-208ENST00000527265 DNAL4O96015 105 aa1.83□□□□□ -2.12
CLNS1A-208ENST00000527265 CFDP00746 253 aaPredicted RBP1.83□□□□□ -2.12
CLNS1A-208ENST00000527265 HMGN3Q15651 99 aa1.83□□□□□ -2.12
CLNS1A-208ENST00000527265 SMIM4Q8WVI0 70 aa1.83□□□□□ -2.12
CLNS1A-208ENST00000527265 NPVFQ9HCQ7 196 aa1.83□□□□□ -2.12
CLNS1A-208ENST00000527265 ROS1P08922 2347 aa1.83□□□□□ -2.12
CLNS1A-208ENST00000527265 KIAA1109Q2LD37 5005 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 PKDREJQ9NTG1 2253 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 TRAV23DV6A0A075B6W5 121 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 TRAV1-2A0A0B4J238 106 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 INE1O15225 51 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 IFI6P09912 130 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 TOMM5Q8N4H5 51 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 ZNF563Q8TA94 476 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 CYP4F30PQ9H0H9 118 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 TMEM14CQ9P0S9 112 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 U3KQA8 63 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 PRKDCP78527 4128 aaKnown RBP1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 TNCP24821 2201 aa1.82□□□□□ -2.12
CLNS1A-208ENST00000527265 HIVEP2P31629 2446 aa1.81□□□□□ -2.12
CLNS1A-208ENST00000527265 CR1P17927 2039 aa1.81□□□□□ -2.12
CLNS1A-208ENST00000527265 ABCA4P78363 2273 aa1.81□□□□□ -2.12
CLNS1A-208ENST00000527265 FXYD6-FXYD2A0A087WZ82 144 aa1.81□□□□□ -2.12
CLNS1A-208ENST00000527265 NAP1L6A6NFF2 107 aa1.81□□□□□ -2.12
CLNS1A-208ENST00000527265 M0R2N4 97 aa1.81□□□□□ -2.12
CLNS1A-208ENST00000527265 PDCD5O14737 125 aa1.81□□□□□ -2.12
CLNS1A-208ENST00000527265 UBE2D1P51668 147 aa1.81□□□□□ -2.12
CLNS1A-208ENST00000527265 BRD3OSQ6XYD6 125 aa1.81□□□□□ -2.12
CLNS1A-208ENST00000527265 ZNF818PQ6ZRF7 136 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms