RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 KRTAP13-2Q52LG2 175 aa6.14□□□□□ -1.43
PRPF40B-204ENST00000527253 FAM19A2Q8N3H0 131 aa6.14□□□□□ -1.43
PRPF40B-204ENST00000527253 M0R378 163 aa6.13□□□□□ -1.43
PRPF40B-204ENST00000527253 UBE2AP49459 152 aa6.13□□□□□ -1.43
PRPF40B-204ENST00000527253 LINC00310P59036 64 aa6.13□□□□□ -1.43
PRPF40B-204ENST00000527253 PRLHP81277 87 aa6.13□□□□□ -1.43
PRPF40B-204ENST00000527253 A0A0U1RRA0 63 aa6.12□□□□□ -1.43
PRPF40B-204ENST00000527253 TSPAN13O95857 204 aa6.12□□□□□ -1.43
PRPF40B-204ENST00000527253 TRGC2P03986 189 aa6.12□□□□□ -1.43
PRPF40B-204ENST00000527253 CRYGAP11844 174 aa6.12□□□□□ -1.43
PRPF40B-204ENST00000527253 TMEM126AQ9H061 195 aa6.12□□□□□ -1.43
PRPF40B-204ENST00000527253 LINC00158P58513 81 aa6.11□□□□□ -1.43
PRPF40B-204ENST00000527253 RPL24P83731 157 aaKnown RBP6.11□□□□□ -1.43
PRPF40B-204ENST00000527253 PRR4Q16378 134 aa6.11□□□□□ -1.43
PRPF40B-204ENST00000527253 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
PRPF40B-204ENST00000527253 SMIM13P0DJ93 91 aa6.1□□□□□ -1.43
PRPF40B-204ENST00000527253 SFTA2Q6UW10 78 aa6.1□□□□□ -1.43
PRPF40B-204ENST00000527253 FAM19A1Q7Z5A9 133 aa6.1□□□□□ -1.43
PRPF40B-204ENST00000527253 SLC7A5P1Q8MH63 180 aa6.1□□□□□ -1.43
PRPF40B-204ENST00000527253 HSBP1O75506 76 aa6.09□□□□□ -1.43
PRPF40B-204ENST00000527253 SERF1AO75920 110 aa6.09□□□□□ -1.43
PRPF40B-204ENST00000527253 LCE2BO14633 110 aa6.08□□□□□ -1.44
PRPF40B-204ENST00000527253 TSPEAR-AS2P59090 65 aa6.08□□□□□ -1.44
PRPF40B-204ENST00000527253 FAM229BQ4G0N7 80 aa6.08□□□□□ -1.44
PRPF40B-204ENST00000527253 PLEKHB2Q96CS7 222 aa6.08□□□□□ -1.44
PRPF40B-204ENST00000527253 COLCA2A8K830 154 aa6.07□□□□□ -1.44
PRPF40B-204ENST00000527253 H0Y8G0 127 aa6.07□□□□□ -1.44
PRPF40B-204ENST00000527253 MIR7-3HGQ8N6C7 128 aa6.07□□□□□ -1.44
PRPF40B-204ENST00000527253 NDUFA12Q9UI09 145 aa6.07□□□□□ -1.44
PRPF40B-204ENST00000527253 LEPROTL1O95214 131 aa6.06□□□□□ -1.44
PRPF40B-204ENST00000527253 MEIG1Q5JSS6 88 aa6.06□□□□□ -1.44
PRPF40B-204ENST00000527253 NCR3O14931 201 aa6.05□□□□□ -1.44
PRPF40B-204ENST00000527253 HERV-K104P63124 156 aa6.05□□□□□ -1.44
PRPF40B-204ENST00000527253 BOD1L2Q8IYS8 172 aa6.05□□□□□ -1.44
PRPF40B-204ENST00000527253 C3orf22Q8N5N4 141 aa6.05□□□□□ -1.44
PRPF40B-204ENST00000527253 PMCHL2Q9BQD1 86 aa6.05□□□□□ -1.44
PRPF40B-204ENST00000527253 MYMXA0A1B0GTQ4 84 aa6.04□□□□□ -1.44
PRPF40B-204ENST00000527253 KRTAP4-16G5E9R7 235 aaPredicted RBP6.04□□□□□ -1.44
PRPF40B-204ENST00000527253 LEPROTO15243 131 aa6.04□□□□□ -1.44
PRPF40B-204ENST00000527253 FABP4P15090 132 aa6.04□□□□□ -1.44
PRPF40B-204ENST00000527253 SPRR1AP35321 89 aa6.04□□□□□ -1.44
PRPF40B-204ENST00000527253 LINC00304Q8N9R0 145 aa6.04□□□□□ -1.44
PRPF40B-204ENST00000527253 RETNLBQ9BQ08 111 aa6.04□□□□□ -1.44
PRPF40B-204ENST00000527253 HIGD2AQ9BW72 106 aa6.04□□□□□ -1.44
PRPF40B-204ENST00000527253 IGKV2D-26A0A0A0MRZ7 120 aa6.03□□□□□ -1.44
PRPF40B-204ENST00000527253 ATP6V1G1O75348 118 aa6.03□□□□□ -1.44
PRPF40B-204ENST00000527253 SMCPP49901 116 aaPredicted RBP6.03□□□□□ -1.44
PRPF40B-204ENST00000527253 DAND5Q8N907 189 aa6.03□□□□□ -1.44
PRPF40B-204ENST00000527253 SPRR4Q96PI1 79 aa6.03□□□□□ -1.44
PRPF40B-204ENST00000527253 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
PRPF40B-204ENST00000527253 LOC107984156A0A0G2JMH3 177 aa6.02□□□□□ -1.45
PRPF40B-204ENST00000527253 TRBV10-3A0A0K0K1G6 114 aa6.02□□□□□ -1.45
PRPF40B-204ENST00000527253 PRYO14603 147 aa6.02□□□□□ -1.45
PRPF40B-204ENST00000527253 ARL17AQ8IVW1 177 aa6.02□□□□□ -1.45
PRPF40B-204ENST00000527253 J3QQQ9 107 aa6.01□□□□□ -1.45
PRPF40B-204ENST00000527253 DPM2O94777 84 aa6.01□□□□□ -1.45
PRPF40B-204ENST00000527253 PLNP26678 52 aa6.01□□□□□ -1.45
PRPF40B-204ENST00000527253 LINC00337Q8N6G1 96 aa6.01□□□□□ -1.45
PRPF40B-204ENST00000527253 SMCR5Q8TEV8 140 aa6.01□□□□□ -1.45
PRPF40B-204ENST00000527253 HSPB8Q9UJY1 196 aa6.01□□□□□ -1.45
PRPF40B-204ENST00000527253 MUC2Q02817 5179 aa6.01□□□□□ -1.45
PRPF40B-204ENST00000527253 LINC00587B1AMM8 73 aa6□□□□□ -1.45
PRPF40B-204ENST00000527253 EIF4EBP3O60516 100 aaPredicted RBP6□□□□□ -1.45
PRPF40B-204ENST00000527253 IGKCP01834 107 aa6□□□□□ -1.45
PRPF40B-204ENST00000527253 MAP1LC3CQ9BXW4 147 aa6□□□□□ -1.45
PRPF40B-204ENST00000527253 SOSTDC1Q6X4U4 206 aa5.99□□□□□ -1.45
PRPF40B-204ENST00000527253 B5MCH6 92 aa5.98□□□□□ -1.45
PRPF40B-204ENST00000527253 ERC2-IT1O76042 136 aa5.98□□□□□ -1.45
PRPF40B-204ENST00000527253 ADAMTSL4-AS1Q5T5F5 129 aa5.98□□□□□ -1.45
PRPF40B-204ENST00000527253 PPDPFQ9H3Y8 114 aa5.98□□□□□ -1.45
PRPF40B-204ENST00000527253 TRBV10-2A0A0K0K1G8 114 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 ETDCA0A1B0GVM5 59 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST1H2BKO60814 126 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST1H2BJP06899 126 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 LGALS3P17931 250 aaKnown RBP5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST1H2BOP23527 126 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 DDTP30046 118 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST1H2BBP33778 126 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 NMUP48645 174 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST1H2BDP58876 126 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HERVK_113P61574 105 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST1H2BCP62807 126 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST2H2BEQ16778 126 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST1H2BHQ93079 126 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST1H2BNQ99877 126 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 HIST1H2BMQ99879 126 aa5.97□□□□□ -1.45
PRPF40B-204ENST00000527253 IGLV7-46A0A075B6I9 117 aa5.96□□□□□ -1.46
PRPF40B-204ENST00000527253 A0A0J9YXY3 114 aa5.96□□□□□ -1.46
PRPF40B-204ENST00000527253 E9PLD3 99 aa5.96□□□□□ -1.46
PRPF40B-204ENST00000527253 CTAG1AP78358 180 aa5.96□□□□□ -1.46
PRPF40B-204ENST00000527253 LINC00483Q53H64 154 aa5.96□□□□□ -1.46
PRPF40B-204ENST00000527253 Q9BRP9 147 aa5.96□□□□□ -1.46
PRPF40B-204ENST00000527253 ZNF706Q9Y5V0 76 aaPredicted RBP5.96□□□□□ -1.46
PRPF40B-204ENST00000527253 SYS1-DBNDD2H3BUS1 97 aa5.95□□□□□ -1.46
PRPF40B-204ENST00000527253 IGLV6-57P01721 117 aa5.95□□□□□ -1.46
PRPF40B-204ENST00000527253 NPC2P61916 151 aa5.95□□□□□ -1.46
PRPF40B-204ENST00000527253 Q8NBF4 154 aa5.95□□□□□ -1.46
PRPF40B-204ENST00000527253 SPANXB1Q9NS25 103 aaPredicted RBP5.95□□□□□ -1.46
PRPF40B-204ENST00000527253 NDUFC2O95298 119 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms