RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 A0A096LNJ9 63 aa13.56□□□□□ -0.24
USP47-205ENST00000525257 S100PP25815 95 aa13.56□□□□□ -0.24
USP47-205ENST00000525257 FABP9Q0Z7S8 132 aa13.56□□□□□ -0.24
USP47-205ENST00000525257 KRTAP13-3Q3SY46 172 aa13.56□□□□□ -0.24
USP47-205ENST00000525257 Q8NBF4 154 aa13.56□□□□□ -0.24
USP47-205ENST00000525257 ZNF706Q9Y5V0 76 aaPredicted RBP13.55□□□□□ -0.24
USP47-205ENST00000525257 LINC00158P58513 81 aa13.54□□□□□ -0.24
USP47-205ENST00000525257 C11orf86A6NJI1 115 aa13.53□□□□□ -0.24
USP47-205ENST00000525257 ASB16-AS1Q495Z4 193 aa13.53□□□□□ -0.24
USP47-205ENST00000525257 TMEM170BQ5T4T1 132 aa13.53□□□□□ -0.24
USP47-205ENST00000525257 SFTA2Q6UW10 78 aa13.53□□□□□ -0.24
USP47-205ENST00000525257 A0A0U1RRA0 63 aa13.52□□□□□ -0.25
USP47-205ENST00000525257 LINC01547P58512 204 aaPredicted RBP13.51□□□□□ -0.25
USP47-205ENST00000525257 COX19Q49B96 90 aa13.51□□□□□ -0.25
USP47-205ENST00000525257 TMEM218A2RU14 115 aa13.5□□□□□ -0.25
USP47-205ENST00000525257 PMCHL1Q16048 86 aa13.5□□□□□ -0.25
USP47-205ENST00000525257 HBDP02042 147 aa13.49□□□□□ -0.25
USP47-205ENST00000525257 CLLU1Q5K131 121 aa13.49□□□□□ -0.25
USP47-205ENST00000525257 BAGE3Q86Y29 109 aa13.49□□□□□ -0.25
USP47-205ENST00000525257 URB1-AS1Q96HZ7 61 aa13.49□□□□□ -0.25
USP47-205ENST00000525257 KRTAP4-1Q9BYQ7 146 aa13.49□□□□□ -0.25
USP47-205ENST00000525257 PRYO14603 147 aa13.48□□□□□ -0.25
USP47-205ENST00000525257 SMCR5Q8TEV8 140 aa13.47□□□□□ -0.25
USP47-205ENST00000525257 SPINK1P00995 79 aa13.46□□□□□ -0.25
USP47-205ENST00000525257 UQCC3Q6UW78 93 aa13.46□□□□□ -0.25
USP47-205ENST00000525257 NCR3O14931 201 aa13.45□□□□□ -0.26
USP47-205ENST00000525257 LINC00614P0C842 121 aa13.45□□□□□ -0.26
USP47-205ENST00000525257 C18orf32Q8TCD1 76 aa13.45□□□□□ -0.26
USP47-205ENST00000525257 SEC61BP60468 96 aaKnown RBP13.44□□□□□ -0.26
USP47-205ENST00000525257 BOD1L2Q8IYS8 172 aa13.44□□□□□ -0.26
USP47-205ENST00000525257 SEC11CQ9BY50 192 aa13.44□□□□□ -0.26
USP47-205ENST00000525257 ETDCA0A1B0GVM5 59 aa13.42□□□□□ -0.26
USP47-205ENST00000525257 SMIM13P0DJ93 91 aa13.42□□□□□ -0.26
USP47-205ENST00000525257 SPRR1AP35321 89 aa13.42□□□□□ -0.26
USP47-205ENST00000525257 ATP6V1G1O75348 118 aa13.41□□□□□ -0.26
USP47-205ENST00000525257 KCNQ1DNQ9H478 68 aa13.41□□□□□ -0.26
USP47-205ENST00000525257 CHTOPQ9Y3Y2 248 aaKnown RBP13.41□□□□□ -0.26
USP47-205ENST00000525257 KRTAP4-16G5E9R7 235 aaPredicted RBP13.4□□□□□ -0.26
USP47-205ENST00000525257 LINC00483Q53H64 154 aa13.4□□□□□ -0.26
USP47-205ENST00000525257 LCE2DQ5TA82 110 aaPredicted RBP13.4□□□□□ -0.26
USP47-205ENST00000525257 TMEM223A0PJW6 202 aa13.39□□□□□ -0.27
USP47-205ENST00000525257 GAGE2AQ6NT46 116 aa13.39□□□□□ -0.27
USP47-205ENST00000525257 NDUFA12Q9UI09 145 aa13.39□□□□□ -0.27
USP47-205ENST00000525257 MOBPQ13875 183 aa13.38□□□□□ -0.27
USP47-205ENST00000525257 MEIG1Q5JSS6 88 aa13.38□□□□□ -0.27
USP47-205ENST00000525257 MIR7-3HGQ8N6C7 128 aa13.38□□□□□ -0.27
USP47-205ENST00000525257 IGLV9-49A0A0B4J1Y8 123 aa13.37□□□□□ -0.27
USP47-205ENST00000525257 TRBV10-3A0A0K0K1G6 114 aa13.37□□□□□ -0.27
USP47-205ENST00000525257 TRAPPC1Q9Y5R8 145 aa13.37□□□□□ -0.27
USP47-205ENST00000525257 Q8N377 158 aa13.36□□□□□ -0.27
USP47-205ENST00000525257 RPS10P5Q9NQ39 176 aa13.36□□□□□ -0.27
USP47-205ENST00000525257 FAM19A2Q8N3H0 131 aa13.34□□□□□ -0.27
USP47-205ENST00000525257 ERC2-IT1O76042 136 aa13.32□□□□□ -0.28
USP47-205ENST00000525257 RPS29P62273 56 aaKnown RBP13.32□□□□□ -0.28
USP47-205ENST00000525257 RHEBQ15382 184 aa13.32□□□□□ -0.28
USP47-205ENST00000525257 B5MCH6 92 aa13.31□□□□□ -0.28
USP47-205ENST00000525257 FSIP2Q5CZC0 6907 aa13.31□□□□□ -0.28
USP47-205ENST00000525257 HERV-K104P63124 156 aa13.3□□□□□ -0.28
USP47-205ENST00000525257 S100A12P80511 92 aa13.3□□□□□ -0.28
USP47-205ENST00000525257 SSBP3-AS1Q7Z2R9 100 aa13.3□□□□□ -0.28
USP47-205ENST00000525257 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
USP47-205ENST00000525257 SLC25A20O43772 301 aa13.29□□□□□ -0.28
USP47-205ENST00000525257 XP32Q5T750 250 aa13.28□□□□□ -0.28
USP47-205ENST00000525257 CRCT1Q9UGL9 99 aa13.28□□□□□ -0.28
USP47-205ENST00000525257 IFI27L1Q96BM0 104 aa13.27□□□□□ -0.29
USP47-205ENST00000525257 C10orf91Q5T1B1 145 aa13.26□□□□□ -0.29
USP47-205ENST00000525257 COMMD7Q86VX2 200 aa13.26□□□□□ -0.29
USP47-205ENST00000525257 Q9BRP9 147 aa13.26□□□□□ -0.29
USP47-205ENST00000525257 LINC00587B1AMM8 73 aa13.25□□□□□ -0.29
USP47-205ENST00000525257 IFITM2Q01629 132 aa13.25□□□□□ -0.29
USP47-205ENST00000525257 DDTP30046 118 aa13.24□□□□□ -0.29
USP47-205ENST00000525257 MAP1LC3CQ9BXW4 147 aa13.24□□□□□ -0.29
USP47-205ENST00000525257 MYMXA0A1B0GTQ4 84 aa13.23□□□□□ -0.29
USP47-205ENST00000525257 LCE2CQ5TA81 110 aa13.22□□□□□ -0.29
USP47-205ENST00000525257 Q6ZRX8 168 aa13.22□□□□□ -0.29
USP47-205ENST00000525257 C9orf153Q5TBE3 101 aa13.21□□□□□ -0.29
USP47-205ENST00000525257 TRBV10-2A0A0K0K1G8 114 aa13.19□□□□□ -0.3
USP47-205ENST00000525257 CHCHD1Q96BP2 118 aaKnown RBP13.19□□□□□ -0.3
USP47-205ENST00000525257 TSPEAR-AS2P59090 65 aa13.18□□□□□ -0.3
USP47-205ENST00000525257 LOC107984156A0A0G2JMH3 177 aa13.16□□□□□ -0.3
USP47-205ENST00000525257 ARL17AQ8IVW1 177 aa13.16□□□□□ -0.3
USP47-205ENST00000525257 H0Y8G0 127 aa13.15□□□□□ -0.3
USP47-205ENST00000525257 SPANXB1Q9NS25 103 aaPredicted RBP13.15□□□□□ -0.3
USP47-205ENST00000525257 KRTAP19-2Q3LHN2 52 aa13.13□□□□□ -0.31
USP47-205ENST00000525257 S100A7L2Q5SY68 101 aa13.13□□□□□ -0.31
USP47-205ENST00000525257 IGLV6-57P01721 117 aa13.12□□□□□ -0.31
USP47-205ENST00000525257 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
USP47-205ENST00000525257 TRAV23DV6A0A075B6W5 121 aa13.11□□□□□ -0.31
USP47-205ENST00000525257 LEPROTO15243 131 aa13.11□□□□□ -0.31
USP47-205ENST00000525257 JOSD1Q15040 202 aaPredicted RBP13.11□□□□□ -0.31
USP47-205ENST00000525257 ST20-AS1Q8NBB2 130 aa13.11□□□□□ -0.31
USP47-205ENST00000525257 MT1HP80294 61 aa13.1□□□□□ -0.31
USP47-205ENST00000525257 HSBP1O75506 76 aa13.09□□□□□ -0.31
USP47-205ENST00000525257 PCOTHQ58A44 107 aa13.09□□□□□ -0.31
USP47-205ENST00000525257 APOC3P02656 99 aa13.08□□□□□ -0.32
USP47-205ENST00000525257 J3QQQ9 107 aa13.07□□□□□ -0.32
USP47-205ENST00000525257 NDUFC2O95298 119 aa13.07□□□□□ -0.32
USP47-205ENST00000525257 IGLV8-61A0A075B6I0 122 aa13.06□□□□□ -0.32
USP47-205ENST00000525257 ZNF73O43830 326 aaPredicted RBP13.06□□□□□ -0.32
USP47-205ENST00000525257 C9orf92A6NGG3 77 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms