RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 COX17Q14061 63 aa2.25□□□□□ -2.05
USP47-204ENST00000525078 SPINK13Q1W4C9 94 aa2.25□□□□□ -2.05
USP47-204ENST00000525078 CFAP126Q5VTH2 177 aa2.25□□□□□ -2.05
USP47-204ENST00000525078 PRR15LQ9BU68 103 aa2.25□□□□□ -2.05
USP47-204ENST00000525078 SMIM27A0A1W2PRY6 76 aa2.24□□□□□ -2.05
USP47-204ENST00000525078 C10orf142B7Z368 130 aa2.24□□□□□ -2.05
USP47-204ENST00000525078 MGPP08493 103 aa2.24□□□□□ -2.05
USP47-204ENST00000525078 BVES-AS1Q5T3Y7 98 aa2.24□□□□□ -2.05
USP47-204ENST00000525078 C6orf201Q7Z4U5 140 aa2.24□□□□□ -2.05
USP47-204ENST00000525078 PSENENQ9NZ42 101 aa2.24□□□□□ -2.05
USP47-204ENST00000525078 F8WEM9 126 aa2.23□□□□□ -2.05
USP47-204ENST00000525078 LY6G6CO95867 125 aa2.23□□□□□ -2.05
USP47-204ENST00000525078 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.23□□□□□ -2.05
USP47-204ENST00000525078 C18orf32Q8TCD1 76 aa2.23□□□□□ -2.05
USP47-204ENST00000525078 PLAC4Q8WY50 150 aa2.23□□□□□ -2.05
USP47-204ENST00000525078 TMEM167BQ9NRX6 74 aa2.23□□□□□ -2.05
USP47-204ENST00000525078 EP400Q96L91 3159 aa2.22□□□□□ -2.05
USP47-204ENST00000525078 H3BSH0 61 aa2.22□□□□□ -2.05
USP47-204ENST00000525078 STATHP02808 62 aa2.22□□□□□ -2.05
USP47-204ENST00000525078 COX8AP10176 69 aa2.22□□□□□ -2.05
USP47-204ENST00000525078 WFDC2Q14508 124 aa2.22□□□□□ -2.05
USP47-204ENST00000525078 MED13LQ71F56 2210 aa2.22□□□□□ -2.05
USP47-204ENST00000525078 GCHFRP30047 84 aa2.21□□□□□ -2.06
USP47-204ENST00000525078 SMIM11BQ8TCY0 68 aa2.21□□□□□ -2.06
USP47-204ENST00000525078 CACNA1CQ13936 2221 aa2.21□□□□□ -2.06
USP47-204ENST00000525078 NCOA6Q14686 2063 aaPredicted RBP2.21□□□□□ -2.06
USP47-204ENST00000525078 MYO7BQ6PIF6 2116 aa2.2□□□□□ -2.06
USP47-204ENST00000525078 TRBV6-1A0A0K0K1D8 114 aa2.2□□□□□ -2.06
USP47-204ENST00000525078 ARMS2P0C7Q2 107 aa2.2□□□□□ -2.06
USP47-204ENST00000525078 ARL14EPLP0DKL9 152 aa2.2□□□□□ -2.06
USP47-204ENST00000525078 LYNX1P0DP58 116 aa2.2□□□□□ -2.06
USP47-204ENST00000525078 PIGYQ3MUY2 71 aa2.2□□□□□ -2.06
USP47-204ENST00000525078 KRTAP13-1Q8IUC0 172 aa2.2□□□□□ -2.06
USP47-204ENST00000525078 TECTAO75443 2155 aa2.19□□□□□ -2.06
USP47-204ENST00000525078 A0A096LNT2 108 aa2.19□□□□□ -2.06
USP47-204ENST00000525078 LEPROTL1O95214 131 aa2.19□□□□□ -2.06
USP47-204ENST00000525078 ACYP1P07311 99 aa2.19□□□□□ -2.06
USP47-204ENST00000525078 IAPPP10997 89 aa2.19□□□□□ -2.06
USP47-204ENST00000525078 TFF3Q07654 80 aa2.19□□□□□ -2.06
USP47-204ENST00000525078 LINC00643Q86TS7 51 aa2.19□□□□□ -2.06
USP47-204ENST00000525078 FDCSPQ8NFU4 85 aa2.19□□□□□ -2.06
USP47-204ENST00000525078 FAM103A1Q9BTL3 118 aaKnown RBP2.19□□□□□ -2.06
USP47-204ENST00000525078 ABCA1O95477 2261 aa2.19□□□□□ -2.06
USP47-204ENST00000525078 SPTY2D1-AS1A0A0U1RR47 76 aa2.18□□□□□ -2.06
USP47-204ENST00000525078 LINC01546A6NGU7 62 aa2.18□□□□□ -2.06
USP47-204ENST00000525078 Q6ZRX8 168 aa2.18□□□□□ -2.06
USP47-204ENST00000525078 LINC01600Q96MT4 127 aa2.18□□□□□ -2.06
USP47-204ENST00000525078 A0A087WVE0 104 aa2.17□□□□□ -2.06
USP47-204ENST00000525078 GVQW2A0A096LPI5 108 aaPredicted RBP2.17□□□□□ -2.06
USP47-204ENST00000525078 H3BUT2 72 aa2.17□□□□□ -2.06
USP47-204ENST00000525078 SMIM13P0DJ93 91 aa2.17□□□□□ -2.06
USP47-204ENST00000525078 DEFB110Q30KQ9 67 aa2.17□□□□□ -2.06
USP47-204ENST00000525078 D6R8Y8 96 aa2.16□□□□□ -2.06
USP47-204ENST00000525078 RPL37P61927 97 aaKnown RBP2.16□□□□□ -2.06
USP47-204ENST00000525078 MUSTN1Q8IVN3 82 aa2.16□□□□□ -2.06
USP47-204ENST00000525078 PCNTO95613 3336 aa2.16□□□□□ -2.06
USP47-204ENST00000525078 A0A1B0GUT8 65 aa2.15□□□□□ -2.07
USP47-204ENST00000525078 LINC01549A6NIU2 74 aa2.15□□□□□ -2.07
USP47-204ENST00000525078 PRCDQ00LT1 54 aa2.15□□□□□ -2.07
USP47-204ENST00000525078 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
USP47-204ENST00000525078 GOLGA4Q13439 2230 aaKnown RBP2.14□□□□□ -2.07
USP47-204ENST00000525078 IQCF6A8MYZ5 107 aa2.14□□□□□ -2.07
USP47-204ENST00000525078 K7EMI3 77 aa2.14□□□□□ -2.07
USP47-204ENST00000525078 PRB1P04280 392 aa2.14□□□□□ -2.07
USP47-204ENST00000525078 PLNP26678 52 aa2.14□□□□□ -2.07
USP47-204ENST00000525078 CNFNQ9BYD5 112 aa2.14□□□□□ -2.07
USP47-204ENST00000525078 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
USP47-204ENST00000525078 SPRR4Q96PI1 79 aa2.13□□□□□ -2.07
USP47-204ENST00000525078 F5P12259 2224 aa2.13□□□□□ -2.07
USP47-204ENST00000525078 USF3Q68DE3 2245 aa2.13□□□□□ -2.07
USP47-204ENST00000525078 MYMXA0A1B0GTQ4 84 aa2.12□□□□□ -2.07
USP47-204ENST00000525078 FCER1GP30273 86 aa2.12□□□□□ -2.07
USP47-204ENST00000525078 KRTAP12-3P60328 96 aa2.12□□□□□ -2.07
USP47-204ENST00000525078 PLGLAQ15195 96 aa2.12□□□□□ -2.07
USP47-204ENST00000525078 C10orf113Q5VZT2 155 aa2.12□□□□□ -2.07
USP47-204ENST00000525078 Q6ZSA8 131 aa2.12□□□□□ -2.07
USP47-204ENST00000525078 TMEM263Q8WUH6 116 aaKnown RBP2.12□□□□□ -2.07
USP47-204ENST00000525078 LINC00472Q9H8W2 130 aa2.12□□□□□ -2.07
USP47-204ENST00000525078 PROK2Q9HC23 129 aa2.12□□□□□ -2.07
USP47-204ENST00000525078 LINC00846Q9NV44 126 aa2.12□□□□□ -2.07
USP47-204ENST00000525078 FLG2Q5D862 2391 aaPredicted RBP2.12□□□□□ -2.07
USP47-204ENST00000525078 SPINK4O60575 86 aa2.11□□□□□ -2.07
USP47-204ENST00000525078 MRPL33O75394 65 aaKnown RBP2.11□□□□□ -2.07
USP47-204ENST00000525078 ANGP03950 147 aaKnown RBP2.11□□□□□ -2.07
USP47-204ENST00000525078 HAMPP81172 84 aa2.11□□□□□ -2.07
USP47-204ENST00000525078 Q6JHZ5 121 aa2.11□□□□□ -2.07
USP47-204ENST00000525078 TMEM167AQ8TBQ9 72 aa2.11□□□□□ -2.07
USP47-204ENST00000525078 HILPDAQ9Y5L2 63 aa2.11□□□□□ -2.07
USP47-204ENST00000525078 IFI27P40305 119 aaPredicted RBP2.1□□□□□ -2.07
USP47-204ENST00000525078 DEFB121Q5J5C9 76 aa2.1□□□□□ -2.07
USP47-204ENST00000525078 MYO7AQ13402 2215 aa2.1□□□□□ -2.07
USP47-204ENST00000525078 G3V318 75 aa2.09□□□□□ -2.07
USP47-204ENST00000525078 SPINK9Q5DT21 86 aa2.09□□□□□ -2.07
USP47-204ENST00000525078 DNAH12Q6ZR08 3092 aa2.09□□□□□ -2.07
USP47-204ENST00000525078 SRCAPQ6ZRS2 3230 aa2.09□□□□□ -2.08
USP47-204ENST00000525078 A0A0C4DFX4 3053 aa2.08□□□□□ -2.08
USP47-204ENST00000525078 COX6B1P14854 86 aa2.08□□□□□ -2.08
USP47-204ENST00000525078 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
USP47-204ENST00000525078 RPL39P5Q59GN2 51 aa2.08□□□□□ -2.08
USP47-204ENST00000525078 CENPFP49454 3210 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms