RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 MGPP08493 103 aa3.19□□□□□ -1.9
NEDD8-203ENST00000524927 NCS1P62166 190 aa3.19□□□□□ -1.9
NEDD8-203ENST00000524927 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
NEDD8-203ENST00000524927 SCP2D1Q9UJQ7 156 aa3.19□□□□□ -1.9
NEDD8-203ENST00000524927 FXYD6-FXYD2A0A087WZ82 144 aa3.18□□□□□ -1.9
NEDD8-203ENST00000524927 HPGDSO60760 199 aa3.18□□□□□ -1.9
NEDD8-203ENST00000524927 S100A11P31949 105 aa3.18□□□□□ -1.9
NEDD8-203ENST00000524927 ATP11AUNQ6ZP68 121 aa3.18□□□□□ -1.9
NEDD8-203ENST00000524927 Q86TA4 180 aa3.18□□□□□ -1.9
NEDD8-203ENST00000524927 MRPL52Q86TS9 123 aaKnown RBP3.18□□□□□ -1.9
NEDD8-203ENST00000524927 HIGD2AQ9BW72 106 aa3.18□□□□□ -1.9
NEDD8-203ENST00000524927 KCNIP2Q9NS61 270 aa3.18□□□□□ -1.9
NEDD8-203ENST00000524927 FAM236DA0A1B0GTK5 79 aa3.17□□□□□ -1.9
NEDD8-203ENST00000524927 CXCL1P09341 107 aa3.17□□□□□ -1.9
NEDD8-203ENST00000524927 AKAIN1P0CW23 69 aa3.17□□□□□ -1.9
NEDD8-203ENST00000524927 FAM236CP0DP71 79 aa3.17□□□□□ -1.9
NEDD8-203ENST00000524927 LIMD2Q9BT23 127 aa3.17□□□□□ -1.9
NEDD8-203ENST00000524927 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
NEDD8-203ENST00000524927 TMEM126AQ9H061 195 aa3.17□□□□□ -1.9
NEDD8-203ENST00000524927 SND1-IT1Q9HBX3 110 aa3.17□□□□□ -1.9
NEDD8-203ENST00000524927 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
NEDD8-203ENST00000524927 TRAV13-1A0A0B4J241 112 aa3.16□□□□□ -1.9
NEDD8-203ENST00000524927 MUC21A0A140T8X8 626 aa3.16□□□□□ -1.9
NEDD8-203ENST00000524927 A8MWP4 228 aa3.16□□□□□ -1.9
NEDD8-203ENST00000524927 SFT2D2O95562 160 aa3.16□□□□□ -1.9
NEDD8-203ENST00000524927 FOXA3P55318 350 aaPredicted RBP3.16□□□□□ -1.9
NEDD8-203ENST00000524927 FAM19A3Q7Z5A8 133 aa3.16□□□□□ -1.9
NEDD8-203ENST00000524927 TMEM242Q9NWH2 141 aa3.16□□□□□ -1.9
NEDD8-203ENST00000524927 C9JQL5 133 aa3.15□□□□□ -1.91
NEDD8-203ENST00000524927 HBG1P69891 147 aa3.15□□□□□ -1.91
NEDD8-203ENST00000524927 HBG2P69892 147 aa3.15□□□□□ -1.91
NEDD8-203ENST00000524927 SEC22CQ9BRL7 303 aa3.15□□□□□ -1.91
NEDD8-203ENST00000524927 BATF3Q9NR55 127 aa3.15□□□□□ -1.91
NEDD8-203ENST00000524927 EPDR1Q9UM22 224 aa3.15□□□□□ -1.91
NEDD8-203ENST00000524927 A0A1B0GW15 77 aa3.14□□□□□ -1.91
NEDD8-203ENST00000524927 RGS5O15539 181 aa3.14□□□□□ -1.91
NEDD8-203ENST00000524927 CXorf1O96002 111 aa3.14□□□□□ -1.91
NEDD8-203ENST00000524927 SULT1A1P50225 295 aa3.14□□□□□ -1.91
NEDD8-203ENST00000524927 C2orf82Q6UX34 121 aa3.14□□□□□ -1.91
NEDD8-203ENST00000524927 MRAP2Q96G30 205 aa3.14□□□□□ -1.91
NEDD8-203ENST00000524927 NDUFA5Q16718 116 aa3.13□□□□□ -1.91
NEDD8-203ENST00000524927 FAM104BQ5XKR9 115 aa3.13□□□□□ -1.91
NEDD8-203ENST00000524927 SLC51BQ86UW2 128 aa3.13□□□□□ -1.91
NEDD8-203ENST00000524927 ZFP30Q9Y2G7 519 aa3.13□□□□□ -1.91
NEDD8-203ENST00000524927 LOC389332A0A1B0GUA5 103 aa3.12□□□□□ -1.91
NEDD8-203ENST00000524927 TMEM238C9JI98 176 aa3.12□□□□□ -1.91
NEDD8-203ENST00000524927 M0R378 163 aa3.12□□□□□ -1.91
NEDD8-203ENST00000524927 DEFA3P59666 94 aa3.12□□□□□ -1.91
NEDD8-203ENST00000524927 MRPS10P82664 201 aaKnown RBP3.12□□□□□ -1.91
NEDD8-203ENST00000524927 FA2HQ7L5A8 372 aa3.12□□□□□ -1.91
NEDD8-203ENST00000524927 C17orf112F2Z3M2 114 aa3.11□□□□□ -1.91
NEDD8-203ENST00000524927 MT1BP07438 61 aa3.11□□□□□ -1.91
NEDD8-203ENST00000524927 CDC34P49427 236 aaPredicted RBP3.11□□□□□ -1.91
NEDD8-203ENST00000524927 C10orf91Q5T1B1 145 aa3.11□□□□□ -1.91
NEDD8-203ENST00000524927 KRTAP8-1Q8IUC2 63 aa3.11□□□□□ -1.91
NEDD8-203ENST00000524927 FAM25AB3EWG3 89 aa3.1□□□□□ -1.91
NEDD8-203ENST00000524927 FAM25CB3EWG5 89 aa3.1□□□□□ -1.91
NEDD8-203ENST00000524927 FAM25GB3EWG6 89 aa3.1□□□□□ -1.91
NEDD8-203ENST00000524927 I3L3M4 83 aa3.1□□□□□ -1.91
NEDD8-203ENST00000524927 IL15RAQ13261 267 aa3.1□□□□□ -1.91
NEDD8-203ENST00000524927 TMEM136Q6ZRR5 245 aa3.1□□□□□ -1.91
NEDD8-203ENST00000524927 SMIM15Q7Z3B0 74 aa3.1□□□□□ -1.91
NEDD8-203ENST00000524927 SMIM4Q8WVI0 70 aa3.1□□□□□ -1.91
NEDD8-203ENST00000524927 LOC105371267A0A1B0GV96 52 aa3.09□□□□□ -1.91
NEDD8-203ENST00000524927 IGSF23A1L1A6 192 aa3.09□□□□□ -1.91
NEDD8-203ENST00000524927 SDHAF1A6NFY7 115 aa3.09□□□□□ -1.91
NEDD8-203ENST00000524927 AP3S2P59780 193 aa3.09□□□□□ -1.91
NEDD8-203ENST00000524927 SMAGPQ0VAQ4 97 aa3.09□□□□□ -1.91
NEDD8-203ENST00000524927 C1orf64Q8NEQ6 169 aa3.09□□□□□ -1.91
NEDD8-203ENST00000524927 YPEL4Q96NS1 127 aa3.09□□□□□ -1.91
NEDD8-203ENST00000524927 FMC1Q96HJ9 113 aa3.08□□□□□ -1.92
NEDD8-203ENST00000524927 ANAPC13Q9BS18 74 aa3.08□□□□□ -1.92
NEDD8-203ENST00000524927 WDR61Q9GZS3 305 aaKnown RBP3.08□□□□□ -1.92
NEDD8-203ENST00000524927 RBM12B-AS1Q9P1G2 102 aa3.08□□□□□ -1.92
NEDD8-203ENST00000524927 C7orf77A4D0Y5 90 aa3.07□□□□□ -1.92
NEDD8-203ENST00000524927 TRGC1P0CF51 173 aa3.07□□□□□ -1.92
NEDD8-203ENST00000524927 PVALBP20472 110 aaPredicted RBP3.07□□□□□ -1.92
NEDD8-203ENST00000524927 Q5VV11 94 aa3.07□□□□□ -1.92
NEDD8-203ENST00000524927 GATD1Q8NB37 220 aa3.07□□□□□ -1.92
NEDD8-203ENST00000524927 LSM5Q9Y4Y9 91 aaKnown RBP3.07□□□□□ -1.92
NEDD8-203ENST00000524927 TGIF2-C20orf24A0A0A6YYL0 155 aa3.06□□□□□ -1.92
NEDD8-203ENST00000524927 A0A0G2JQZ4 141 aa3.06□□□□□ -1.92
NEDD8-203ENST00000524927 C9orf170A2RU37 121 aa3.06□□□□□ -1.92
NEDD8-203ENST00000524927 PET100P0DJ07 73 aa3.06□□□□□ -1.92
NEDD8-203ENST00000524927 ARL14EPLP0DKL9 152 aa3.06□□□□□ -1.92
NEDD8-203ENST00000524927 SCGB1C2P0DMR2 95 aa3.06□□□□□ -1.92
NEDD8-203ENST00000524927 CKS1BP61024 79 aa3.06□□□□□ -1.92
NEDD8-203ENST00000524927 MCFD2Q8NI22 146 aa3.06□□□□□ -1.92
NEDD8-203ENST00000524927 SCGB1C1Q8TD33 95 aa3.06□□□□□ -1.92
NEDD8-203ENST00000524927 SMCR5Q8TEV8 140 aa3.06□□□□□ -1.92
NEDD8-203ENST00000524927 RPL39LQ96EH5 51 aaKnown RBP3.06□□□□□ -1.92
NEDD8-203ENST00000524927 IFNA1P01562 189 aa3.05□□□□□ -1.92
NEDD8-203ENST00000524927 AQP4P55087 323 aa3.05□□□□□ -1.92
NEDD8-203ENST00000524927 HIST1H2BAQ96A08 127 aa3.05□□□□□ -1.92
NEDD8-203ENST00000524927 A0A1W2PRE2 83 aa3.04□□□□□ -1.92
NEDD8-203ENST00000524927 LTAP01374 205 aa3.04□□□□□ -1.92
NEDD8-203ENST00000524927 G0S2P27469 103 aa3.04□□□□□ -1.92
NEDD8-203ENST00000524927 C9orf153Q5TBE3 101 aa3.04□□□□□ -1.92
NEDD8-203ENST00000524927 Q6ZUT4 128 aa3.04□□□□□ -1.92
NEDD8-203ENST00000524927 CNBD2Q96M20 576 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms