RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 IGLV1-51P01701 117 aa8.99□□□□□ -0.97
CAPN1-202ENST00000524773 TMEM256-PLSCR3K7ERE1 68 aa8.98□□□□□ -0.97
CAPN1-202ENST00000524773 HTN3P15516 51 aa8.98□□□□□ -0.97
CAPN1-202ENST00000524773 SNURFQ9Y675 71 aa8.98□□□□□ -0.97
CAPN1-202ENST00000524773 XAGE1AQ9HD64 81 aa8.98□□□□□ -0.97
CAPN1-202ENST00000524773 TRAV10A0A0B4J240 114 aa8.97□□□□□ -0.97
CAPN1-202ENST00000524773 TMEM258P61165 79 aa8.97□□□□□ -0.97
CAPN1-202ENST00000524773 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
CAPN1-202ENST00000524773 UBL5Q9BZL1 73 aa8.97□□□□□ -0.97
CAPN1-202ENST00000524773 JMJD7-PLA2G4BH0Y9G9 81 aa8.96□□□□□ -0.97
CAPN1-202ENST00000524773 REG3AQ06141 175 aa8.96□□□□□ -0.98
CAPN1-202ENST00000524773 Q6ZQY7 126 aa8.96□□□□□ -0.98
CAPN1-202ENST00000524773 HIVEP1P15822 2718 aa8.96□□□□□ -0.98
CAPN1-202ENST00000524773 C5orf47Q569G3 176 aa8.95□□□□□ -0.98
CAPN1-202ENST00000524773 LINC00167Q96N53 147 aa8.95□□□□□ -0.98
CAPN1-202ENST00000524773 RBM3P98179 157 aaKnown RBP8.94□□□□□ -0.98
CAPN1-202ENST00000524773 DEFB135Q30KP9 77 aa8.94□□□□□ -0.98
CAPN1-202ENST00000524773 LINC00575Q6W349 94 aa8.94□□□□□ -0.98
CAPN1-202ENST00000524773 SMR3AQ99954 134 aa8.94□□□□□ -0.98
CAPN1-202ENST00000524773 TEP1Q99973 2627 aaKnown RBP8.94□□□□□ -0.98
CAPN1-202ENST00000524773 CD164L2Q6UWJ8 174 aa8.93□□□□□ -0.98
CAPN1-202ENST00000524773 Q6ZQT0 140 aa8.93□□□□□ -0.98
CAPN1-202ENST00000524773 X6R8D5 127 aa8.93□□□□□ -0.98
CAPN1-202ENST00000524773 Q5XG85 94 aa8.93□□□□□ -0.98
CAPN1-202ENST00000524773 PRO0255Q9UI72 69 aa8.93□□□□□ -0.98
CAPN1-202ENST00000524773 RPS28P62857 69 aaKnown RBP8.92□□□□□ -0.98
CAPN1-202ENST00000524773 A0A1B0GUV1 79 aa8.92□□□□□ -0.98
CAPN1-202ENST00000524773 LINC01547P58512 204 aaPredicted RBP8.92□□□□□ -0.98
CAPN1-202ENST00000524773 RMI2Q96E14 147 aa8.92□□□□□ -0.98
CAPN1-202ENST00000524773 CYSRT1A8MQ03 144 aa8.91□□□□□ -0.98
CAPN1-202ENST00000524773 SPAG11BQ08648 103 aa8.91□□□□□ -0.98
CAPN1-202ENST00000524773 Q6ZVQ6 151 aa8.91□□□□□ -0.98
CAPN1-202ENST00000524773 C16orf95Q9H693 158 aa8.91□□□□□ -0.98
CAPN1-202ENST00000524773 ATRQ13535 2644 aa8.91□□□□□ -0.98
CAPN1-202ENST00000524773 Q8N9L7 120 aa8.91□□□□□ -0.98
CAPN1-202ENST00000524773 KLK12Q9UKR0 248 aa8.91□□□□□ -0.98
CAPN1-202ENST00000524773 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.98
CAPN1-202ENST00000524773 CELA1Q9UNI1 258 aa8.9□□□□□ -0.98
CAPN1-202ENST00000524773 OTOGQ6ZRI0 2925 aa8.9□□□□□ -0.98
CAPN1-202ENST00000524773 KRTAP10-3P60369 221 aa8.89□□□□□ -0.99
CAPN1-202ENST00000524773 NDUFC2O95298 119 aa8.88□□□□□ -0.99
CAPN1-202ENST00000524773 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.88□□□□□ -0.99
CAPN1-202ENST00000524773 FLNBO75369 2602 aaKnown RBP8.88□□□□□ -0.99
CAPN1-202ENST00000524773 C1orf43Q9BWL3 253 aa8.88□□□□□ -0.99
CAPN1-202ENST00000524773 HIGD2BQ4VC39 106 aa8.88□□□□□ -0.99
CAPN1-202ENST00000524773 LYPD5Q6UWN5 251 aa8.88□□□□□ -0.99
CAPN1-202ENST00000524773 TM2D3Q9BRN9 247 aa8.87□□□□□ -0.99
CAPN1-202ENST00000524773 H7BZZ5 65 aa8.86□□□□□ -0.99
CAPN1-202ENST00000524773 ZNF561-AS1K7EIQ3 104 aa8.86□□□□□ -0.99
CAPN1-202ENST00000524773 FAM236DA0A1B0GTK5 79 aa8.86□□□□□ -0.99
CAPN1-202ENST00000524773 FAM236CP0DP71 79 aa8.86□□□□□ -0.99
CAPN1-202ENST00000524773 NSD1Q96L73 2696 aaPredicted RBP8.86□□□□□ -0.99
CAPN1-202ENST00000524773 COX17Q14061 63 aa8.85□□□□□ -0.99
CAPN1-202ENST00000524773 ATP5EP2Q5VTU8 51 aa8.85□□□□□ -0.99
CAPN1-202ENST00000524773 LINC00612Q8N6U2 182 aa8.85□□□□□ -0.99
CAPN1-202ENST00000524773 IGHV4-28A0A0C4DH34 117 aa8.84□□□□□ -0.99
CAPN1-202ENST00000524773 F8WEM9 126 aa8.84□□□□□ -0.99
CAPN1-202ENST00000524773 DAD1P61803 113 aa8.84□□□□□ -0.99
CAPN1-202ENST00000524773 MUC7Q8TAX7 377 aa8.83□□□□□ -1
CAPN1-202ENST00000524773 C6orf48Q9UBA6 75 aa8.83□□□□□ -1
CAPN1-202ENST00000524773 F8P00451 2351 aa8.83□□□□□ -1
CAPN1-202ENST00000524773 IGLV6-57P01721 117 aa8.82□□□□□ -1
CAPN1-202ENST00000524773 INAFM1C9JVW0 142 aa8.81□□□□□ -1
CAPN1-202ENST00000524773 BAHCC1Q9P281 2608 aa8.8□□□□□ -1
CAPN1-202ENST00000524773 TRAV7A0A075B6U4 112 aa8.8□□□□□ -1
CAPN1-202ENST00000524773 LINC00474Q9P2X8 69 aa8.8□□□□□ -1
CAPN1-202ENST00000524773 LOC110117498A0A087WWA1 95 aa8.8□□□□□ -1
CAPN1-202ENST00000524773 ZNF73O43830 326 aaPredicted RBP8.79□□□□□ -1
CAPN1-202ENST00000524773 DIRC1Q969H9 104 aa8.79□□□□□ -1
CAPN1-202ENST00000524773 DEFB105AQ8NG35 78 aa8.79□□□□□ -1
CAPN1-202ENST00000524773 C3orf84H3BNL1 204 aa8.79□□□□□ -1
CAPN1-202ENST00000524773 BPY2O14599 106 aa8.79□□□□□ -1
CAPN1-202ENST00000524773 COX7BP24311 80 aa8.77□□□□□ -1.01
CAPN1-202ENST00000524773 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
CAPN1-202ENST00000524773 TENM3Q9P273 2699 aa8.76□□□□□ -1.01
CAPN1-202ENST00000524773 LYRM9A8MSI8 78 aa8.76□□□□□ -1.01
CAPN1-202ENST00000524773 A0A0J9YWU9 116 aa8.75□□□□□ -1.01
CAPN1-202ENST00000524773 IGHV4-30-4P0DP06 118 aa8.75□□□□□ -1.01
CAPN1-202ENST00000524773 WFDC10BQ8IUB3 73 aa8.75□□□□□ -1.01
CAPN1-202ENST00000524773 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
CAPN1-202ENST00000524773 CAMK2N2Q96S95 79 aa8.74□□□□□ -1.01
CAPN1-202ENST00000524773 TRBV7-4A0A0J9YYF1 115 aa8.73□□□□□ -1.01
CAPN1-202ENST00000524773 Q6ZRU5 148 aa8.73□□□□□ -1.01
CAPN1-202ENST00000524773 ANK2Q01484 3957 aa8.73□□□□□ -1.01
CAPN1-202ENST00000524773 NDUFC2-KCTD14E9PQ53 114 aa8.73□□□□□ -1.01
CAPN1-202ENST00000524773 KLKP1Q107X0 134 aa8.73□□□□□ -1.01
CAPN1-202ENST00000524773 NREPQ16612 68 aa8.73□□□□□ -1.01
CAPN1-202ENST00000524773 Q8NAQ8 132 aa8.72□□□□□ -1.01
CAPN1-202ENST00000524773 FAM229BQ4G0N7 80 aa8.72□□□□□ -1.01
CAPN1-202ENST00000524773 LELP1Q5T871 98 aa8.72□□□□□ -1.01
CAPN1-202ENST00000524773 SERP1Q9Y6X1 66 aa8.72□□□□□ -1.01
CAPN1-202ENST00000524773 ELOF1P60002 83 aaKnown RBP8.71□□□□□ -1.01
CAPN1-202ENST00000524773 C9orf66Q5T8R8 295 aa8.71□□□□□ -1.01
CAPN1-202ENST00000524773 RETNQ9HD89 108 aa8.71□□□□□ -1.01
CAPN1-202ENST00000524773 H3BQ85 93 aa8.71□□□□□ -1.02
CAPN1-202ENST00000524773 VPREB1P12018 145 aa8.71□□□□□ -1.02
CAPN1-202ENST00000524773 CXCL6P80162 114 aa8.71□□□□□ -1.02
CAPN1-202ENST00000524773 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.02
CAPN1-202ENST00000524773 MIFP14174 115 aa8.7□□□□□ -1.02
CAPN1-202ENST00000524773 PRR34Q9NV39 138 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms