RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636		Q8N6K4	173 aa		3.44	□□□□□ -1.86
PABPC1-223	ENST00000523636	DAND5	Q8N907	189 aa		3.44	□□□□□ -1.86
PABPC1-223	ENST00000523636	C7orf33	Q8WU49	177 aa		3.44	□□□□□ -1.86
PABPC1-223	ENST00000523636	PRO0461	Q9UI25	63 aa		3.44	□□□□□ -1.86
PABPC1-223	ENST00000523636	USH2A	O75445	5202 aa		3.44	□□□□□ -1.86
PABPC1-223	ENST00000523636	TRBV20-1	A0A075B6N2	111 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636		A0A0J9YXY3	114 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636		K7ERJ3	54 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	CTSG	P08311	255 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	SMIM13	P0DJ93	91 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	COX7C	P15954	63 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	S100A4	P26447	101 aa	Known RBP	3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	UBE2B	P63146	152 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	MRPS36	P82909	103 aa	Known RBP	3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	WFDC2	Q14508	124 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	ETDB	Q3ZM63	59 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	FAM104B	Q5XKR9	115 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	LYZL1	Q6UWQ5	148 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	DEFB104A	Q8WTQ1	72 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	VSIG2	Q96IQ7	327 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	CELA1	Q9UNI1	258 aa		3.43	□□□□□ -1.86
PABPC1-223	ENST00000523636	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	FAM223B	A6NKX1	122 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636		H3BUA1	57 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	SH2D1A	O60880	128 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	IGHV3-11	P01762	117 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	IGHV3-23	P01764	117 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	HBD	P02042	147 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	ARMS2	P0C7Q2	107 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	CFC1B	P0CG36	223 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	CFC1	P0CG37	223 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	COX8A	P10176	69 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	CRIP1	P50238	77 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	SNRPD3	P62318	126 aa	Known RBP	3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	C15orf32	Q32M92	178 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636		Q6ZTC4	211 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	FAM223A	Q8IWN6	122 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636		Q8N9W7	124 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	USMG5	Q96IX5	58 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	LITAF	Q99732	161 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	CHCHD5	Q9BSY4	110 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	CHAC1	Q9BUX1	264 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	NXT2	Q9NPJ8	142 aa	Known RBP	3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	LINC00588	Q9Y4M8	146 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636	LENEP	Q9Y5L5	61 aa		3.42	□□□□□ -1.86
PABPC1-223	ENST00000523636		D6R8Y8	96 aa		3.41	□□□□□ -1.86
PABPC1-223	ENST00000523636		H3BT86	120 aa		3.41	□□□□□ -1.86
PABPC1-223	ENST00000523636		M0R3E3	92 aa		3.41	□□□□□ -1.86
PABPC1-223	ENST00000523636	PPP1R17	O96001	155 aa		3.41	□□□□□ -1.86
PABPC1-223	ENST00000523636	RNASE4	P34096	147 aa	Known RBP	3.41	□□□□□ -1.86
PABPC1-223	ENST00000523636	CAMK2N2	Q96S95	79 aa		3.41	□□□□□ -1.86
PABPC1-223	ENST00000523636	SERP1	Q9Y6X1	66 aa		3.41	□□□□□ -1.86
PABPC1-223	ENST00000523636	TMSB15B	A0A087X1C1	80 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636		A0A1B0GW54	56 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	LINC01549	A6NIU2	74 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636		K7EMI3	77 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	NDUFA4	O00483	81 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	FCER1G	P30273	86 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	IFI27	P40305	119 aa	Predicted RBP	3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	MRPL51	Q4U2R6	128 aa	Known RBP	3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	CFAP126	Q5VTH2	177 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636		Q8NBF4	154 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	IFI27L1	Q96BM0	104 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	RMI2	Q96E14	147 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	CNFN	Q9BYD5	112 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	HIGD1B	Q9P298	99 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636		S4R3C0	116 aa		3.4	□□□□□ -1.87
PABPC1-223	ENST00000523636	MACF1	Q9UPN3	7388 aa	Known RBP	3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	LINC01546	A6NGU7	62 aa		3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	DEFB4A	O15263	64 aa		3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	IGKV2D-40	P01614	121 aa	Predicted RBP	3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	TRGV3	P03979	118 aa		3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	CRIP2	P52943	208 aa	Predicted RBP	3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	CMC4	P56277	68 aa	Predicted RBP	3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	NDP	Q00604	133 aa		3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	SPANXN1	Q5VSR9	72 aa		3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	SH2D6	Q7Z4S9	175 aa		3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	AMN1	Q8IY45	258 aa		3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636		Q8N8P6	123 aa		3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	OPRPN	Q99935	248 aa	Predicted RBP	3.39	□□□□□ -1.87
PABPC1-223	ENST00000523636	TRAV21	A0A0B4J279	112 aa		3.38	□□□□□ -1.87
PABPC1-223	ENST00000523636		G3V318	75 aa		3.38	□□□□□ -1.87
PABPC1-223	ENST00000523636	CEND1	Q8N111	149 aa		3.38	□□□□□ -1.87
PABPC1-223	ENST00000523636	C8orf17	Q9NRJ1	99 aa		3.38	□□□□□ -1.87
PABPC1-223	ENST00000523636	ATOX1	O00244	68 aa		3.37	□□□□□ -1.87
PABPC1-223	ENST00000523636	LEPROT	O15243	131 aa		3.37	□□□□□ -1.87
PABPC1-223	ENST00000523636	NPY	P01303	97 aa		3.37	□□□□□ -1.87
PABPC1-223	ENST00000523636	ACYP1	P07311	99 aa		3.37	□□□□□ -1.87
PABPC1-223	ENST00000523636	RNASE13	Q5GAN3	156 aa	Known RBP	3.37	□□□□□ -1.87
PABPC1-223	ENST00000523636	C7orf65	Q6ZTY9	151 aa		3.37	□□□□□ -1.87
PABPC1-223	ENST00000523636	C2orf91	Q6ZV80	131 aa		3.37	□□□□□ -1.87
PABPC1-223	ENST00000523636		Q8TAT8	98 aa		3.37	□□□□□ -1.87
PABPC1-223	ENST00000523636	DIRC1	Q969H9	104 aa		3.37	□□□□□ -1.87
PABPC1-223	ENST00000523636		A0A087X002	238 aa		3.36	□□□□□ -1.87
PABPC1-223	ENST00000523636	IGHV3-66	A0A0C4DH42	116 aa		3.36	□□□□□ -1.87
PABPC1-223	ENST00000523636	NBDY	A0A0U1RRE5	68 aa		3.36	□□□□□ -1.87
PABPC1-223	ENST00000523636	IGKC	P01834	107 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms