RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 NOTCH1P46531 2555 aa9.06□□□□□ -0.96
PCDHGB1-201ENST00000523390 DCHS1Q96JQ0 3298 aa9.05□□□□□ -0.96
PCDHGB1-201ENST00000523390 NDUFC2-KCTD14E9PQ53 114 aa9.05□□□□□ -0.96
PCDHGB1-201ENST00000523390 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
PCDHGB1-201ENST00000523390 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
PCDHGB1-201ENST00000523390 UPK3BQ9BT76 320 aa9.05□□□□□ -0.96
PCDHGB1-201ENST00000523390 COL12A1Q99715 3063 aa9.05□□□□□ -0.96
PCDHGB1-201ENST00000523390 A0A087WYN8 130 aa9.05□□□□□ -0.96
PCDHGB1-201ENST00000523390 A8MTW9 85 aa9.05□□□□□ -0.96
PCDHGB1-201ENST00000523390 KRTAP10-3P60369 221 aa9.05□□□□□ -0.96
PCDHGB1-201ENST00000523390 ASPMQ8IZT6 3477 aa9.05□□□□□ -0.96
PCDHGB1-201ENST00000523390 M0QXV9 152 aa9.04□□□□□ -0.96
PCDHGB1-201ENST00000523390 DHRS4-AS1Q9P1J3 65 aa9.04□□□□□ -0.96
PCDHGB1-201ENST00000523390 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
PCDHGB1-201ENST00000523390 UBR5O95071 2799 aaPredicted RBP9.03□□□□□ -0.96
PCDHGB1-201ENST00000523390 CSNK1G2-AS1Q8NCQ2 148 aa9.02□□□□□ -0.97
PCDHGB1-201ENST00000523390 LRBAP50851 2863 aa9.02□□□□□ -0.97
PCDHGB1-201ENST00000523390 IGLV5-45A0A087WSX0 123 aa9.02□□□□□ -0.97
PCDHGB1-201ENST00000523390 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
PCDHGB1-201ENST00000523390 ZNF575Q86XF7 245 aa9.02□□□□□ -0.97
PCDHGB1-201ENST00000523390 Q8N814 137 aa9.02□□□□□ -0.97
PCDHGB1-201ENST00000523390 C2orf48Q96LS8 159 aa9.01□□□□□ -0.97
PCDHGB1-201ENST00000523390 C19orf73Q9NVV2 129 aa9.01□□□□□ -0.97
PCDHGB1-201ENST00000523390 LINC01561Q8N1V8 128 aa9.01□□□□□ -0.97
PCDHGB1-201ENST00000523390 PLAC8L1A1L4L8 177 aa9.01□□□□□ -0.97
PCDHGB1-201ENST00000523390 GIG44P09565 113 aaPredicted RBP9□□□□□ -0.97
PCDHGB1-201ENST00000523390 LINC01556Q5JQF7 62 aa9□□□□□ -0.97
PCDHGB1-201ENST00000523390 C7orf33Q8WU49 177 aa9□□□□□ -0.97
PCDHGB1-201ENST00000523390 NDUFC2O95298 119 aa9□□□□□ -0.97
PCDHGB1-201ENST00000523390 ZZEF1O43149 2961 aa8.99□□□□□ -0.97
PCDHGB1-201ENST00000523390 SOSTDC1Q6X4U4 206 aa8.98□□□□□ -0.97
PCDHGB1-201ENST00000523390 MP68P56378 58 aa8.98□□□□□ -0.97
PCDHGB1-201ENST00000523390 C10orf25Q5T742 122 aa8.98□□□□□ -0.97
PCDHGB1-201ENST00000523390 ZFHX4Q86UP3 3567 aa8.98□□□□□ -0.97
PCDHGB1-201ENST00000523390 LINC00474Q9P2X8 69 aa8.97□□□□□ -0.97
PCDHGB1-201ENST00000523390 DMXL1Q9Y485 3027 aa8.96□□□□□ -0.97
PCDHGB1-201ENST00000523390 NHLRC4P0CG21 123 aaPredicted RBP8.96□□□□□ -0.98
PCDHGB1-201ENST00000523390 ATP5EP2Q5VTU8 51 aa8.95□□□□□ -0.98
PCDHGB1-201ENST00000523390 CR1P17927 2039 aa8.95□□□□□ -0.98
PCDHGB1-201ENST00000523390 C20orf197Q8N268 126 aa8.95□□□□□ -0.98
PCDHGB1-201ENST00000523390 C6orf48Q9UBA6 75 aa8.95□□□□□ -0.98
PCDHGB1-201ENST00000523390 H3BNG1 76 aa8.95□□□□□ -0.98
PCDHGB1-201ENST00000523390 IGLV9-49A0A0B4J1Y8 123 aa8.94□□□□□ -0.98
PCDHGB1-201ENST00000523390 HRCT1Q6UXD1 115 aa8.94□□□□□ -0.98
PCDHGB1-201ENST00000523390 KRTAP10-11P60412 298 aa8.94□□□□□ -0.98
PCDHGB1-201ENST00000523390 REG3GQ6UW15 175 aa8.94□□□□□ -0.98
PCDHGB1-201ENST00000523390 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
PCDHGB1-201ENST00000523390 SPINK6Q6UWN8 80 aa8.93□□□□□ -0.98
PCDHGB1-201ENST00000523390 MDFIQ99750 246 aa8.93□□□□□ -0.98
PCDHGB1-201ENST00000523390 BAHCC1Q9P281 2608 aa8.92□□□□□ -0.98
PCDHGB1-201ENST00000523390 IGLV5-52A0A0A0MRZ9 124 aa8.92□□□□□ -0.98
PCDHGB1-201ENST00000523390 ITPR1Q14643 2758 aa8.91□□□□□ -0.98
PCDHGB1-201ENST00000523390 F8WDY8 70 aa8.91□□□□□ -0.98
PCDHGB1-201ENST00000523390 LINC00575Q6W349 94 aa8.91□□□□□ -0.98
PCDHGB1-201ENST00000523390 LINC00588Q9Y4M8 146 aa8.91□□□□□ -0.98
PCDHGB1-201ENST00000523390 C1orf134Q5TEV5 83 aa8.9□□□□□ -0.98
PCDHGB1-201ENST00000523390 C1orf137Q5JT78 98 aa8.9□□□□□ -0.98
PCDHGB1-201ENST00000523390 SPATA3Q8NHX4 192 aa8.89□□□□□ -0.99
PCDHGB1-201ENST00000523390 ITPR2Q14571 2701 aa8.89□□□□□ -0.99
PCDHGB1-201ENST00000523390 FAM240AA0A1B0GVK7 77 aa8.89□□□□□ -0.99
PCDHGB1-201ENST00000523390 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
PCDHGB1-201ENST00000523390 PRLHP81277 87 aa8.89□□□□□ -0.99
PCDHGB1-201ENST00000523390 WFDC13Q8IUB5 93 aa8.89□□□□□ -0.99
PCDHGB1-201ENST00000523390 K7EIL1 84 aa8.88□□□□□ -0.99
PCDHGB1-201ENST00000523390 Q6Q795 121 aa8.88□□□□□ -0.99
PCDHGB1-201ENST00000523390 ZNF706Q9Y5V0 76 aaPredicted RBP8.88□□□□□ -0.99
PCDHGB1-201ENST00000523390 NBEAL2Q6ZNJ1 2754 aa8.88□□□□□ -0.99
PCDHGB1-201ENST00000523390 C3orf22Q8N5N4 141 aa8.88□□□□□ -0.99
PCDHGB1-201ENST00000523390 UQCRQO14949 82 aa8.87□□□□□ -0.99
PCDHGB1-201ENST00000523390 EIF4EBP3O60516 100 aaPredicted RBP8.87□□□□□ -0.99
PCDHGB1-201ENST00000523390 LITAFQ99732 161 aa8.87□□□□□ -0.99
PCDHGB1-201ENST00000523390 IMUPQ9GZP8 106 aa8.87□□□□□ -0.99
PCDHGB1-201ENST00000523390 PRYO14603 147 aa8.86□□□□□ -0.99
PCDHGB1-201ENST00000523390 FAM218AQ96MZ4 157 aa8.86□□□□□ -0.99
PCDHGB1-201ENST00000523390 A0A087WVE0 104 aa8.86□□□□□ -0.99
PCDHGB1-201ENST00000523390 NBEAL1Q6ZS30 2694 aa8.86□□□□□ -0.99
PCDHGB1-201ENST00000523390 IGKV4-1P06312 121 aa8.86□□□□□ -0.99
PCDHGB1-201ENST00000523390 Q6JHZ5 121 aa8.85□□□□□ -0.99
PCDHGB1-201ENST00000523390 J3KT08 172 aa8.85□□□□□ -0.99
PCDHGB1-201ENST00000523390 LINC00167Q96N53 147 aa8.84□□□□□ -0.99
PCDHGB1-201ENST00000523390 LINC00612Q8N6U2 182 aa8.83□□□□□ -1
PCDHGB1-201ENST00000523390 TMEM258P61165 79 aa8.82□□□□□ -1
PCDHGB1-201ENST00000523390 LINC00846Q9NV44 126 aa8.82□□□□□ -1
PCDHGB1-201ENST00000523390 LAMA5O15230 3695 aa8.82□□□□□ -1
PCDHGB1-201ENST00000523390 Q9BRP9 147 aa8.82□□□□□ -1
PCDHGB1-201ENST00000523390 SERP2Q8N6R1 65 aa8.81□□□□□ -1
PCDHGB1-201ENST00000523390 DNAH10OSP0CZ25 163 aa8.8□□□□□ -1
PCDHGB1-201ENST00000523390 A0A087WSZ3 146 aa8.79□□□□□ -1
PCDHGB1-201ENST00000523390 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
PCDHGB1-201ENST00000523390 SMCR5Q8TEV8 140 aa8.79□□□□□ -1
PCDHGB1-201ENST00000523390 SNURFQ9Y675 71 aa8.79□□□□□ -1
PCDHGB1-201ENST00000523390 UTP20O75691 2785 aaKnown RBP8.79□□□□□ -1
PCDHGB1-201ENST00000523390 COX7CP15954 63 aa8.79□□□□□ -1
PCDHGB1-201ENST00000523390 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
PCDHGB1-201ENST00000523390 CIRBP-AS1Q8TBR5 109 aa8.78□□□□□ -1
PCDHGB1-201ENST00000523390 SMG1Q96Q15 3661 aaKnown RBP8.78□□□□□ -1
PCDHGB1-201ENST00000523390 GVQW2A0A096LPI5 108 aaPredicted RBP8.77□□□□□ -1.01
PCDHGB1-201ENST00000523390 Q6ZRP5 223 aa8.77□□□□□ -1.01
PCDHGB1-201ENST00000523390 KIAA0087Q14695 138 aa8.77□□□□□ -1.01
PCDHGB1-201ENST00000523390 SVIPQ8NHG7 77 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms