RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 COX17Q14061 63 aa4.59□□□□□ -1.67
CSMD1-211ENST00000523062 KRTAP26-1Q6PEX3 210 aa4.59□□□□□ -1.67
CSMD1-211ENST00000523062 MUC7Q8TAX7 377 aa4.59□□□□□ -1.67
CSMD1-211ENST00000523062 UPK3BQ9BT76 320 aa4.59□□□□□ -1.67
CSMD1-211ENST00000523062 SND1-IT1Q9HBX3 110 aa4.59□□□□□ -1.67
CSMD1-211ENST00000523062 IGKV2D-24A0A075B6R9 120 aa4.58□□□□□ -1.68
CSMD1-211ENST00000523062 GVQW2A0A096LPI5 108 aaPredicted RBP4.58□□□□□ -1.68
CSMD1-211ENST00000523062 F8W1H4 67 aa4.58□□□□□ -1.68
CSMD1-211ENST00000523062 H3BMG7 143 aa4.58□□□□□ -1.68
CSMD1-211ENST00000523062 TRIAP1O43715 76 aa4.58□□□□□ -1.68
CSMD1-211ENST00000523062 TCL1BO95988 128 aa4.58□□□□□ -1.68
CSMD1-211ENST00000523062 COX6CP09669 75 aa4.58□□□□□ -1.68
CSMD1-211ENST00000523062 F8WDY8 70 aa4.57□□□□□ -1.68
CSMD1-211ENST00000523062 ATXN8Q156A1 80 aa4.57□□□□□ -1.68
CSMD1-211ENST00000523062 UNQ6190/PRO20217Q6UXQ8 127 aa4.57□□□□□ -1.68
CSMD1-211ENST00000523062 RMI2Q96E14 147 aa4.57□□□□□ -1.68
CSMD1-211ENST00000523062 ZNF561-AS1K7EIQ3 104 aa4.56□□□□□ -1.68
CSMD1-211ENST00000523062 HIGD2BQ4VC39 106 aa4.56□□□□□ -1.68
CSMD1-211ENST00000523062 C10orf25Q5T742 122 aa4.56□□□□□ -1.68
CSMD1-211ENST00000523062 C6orf223Q8N319 242 aa4.56□□□□□ -1.68
CSMD1-211ENST00000523062 C15orf56Q8N910 161 aa4.56□□□□□ -1.68
CSMD1-211ENST00000523062 C2orf48Q96LS8 159 aa4.56□□□□□ -1.68
CSMD1-211ENST00000523062 Q9HAA7 133 aa4.56□□□□□ -1.68
CSMD1-211ENST00000523062 PRO0461Q9UI25 63 aa4.56□□□□□ -1.68
CSMD1-211ENST00000523062 IGKV2-28A0A075B6P5 120 aa4.55□□□□□ -1.68
CSMD1-211ENST00000523062 NUPR2A6NF83 97 aa4.55□□□□□ -1.68
CSMD1-211ENST00000523062 NDUFC2O95298 119 aa4.55□□□□□ -1.68
CSMD1-211ENST00000523062 IGKV2D-28P01615 120 aa4.55□□□□□ -1.68
CSMD1-211ENST00000523062 C9orf116Q5BN46 136 aaPredicted RBP4.55□□□□□ -1.68
CSMD1-211ENST00000523062 UBE2DNLQ8IWF7 75 aa4.55□□□□□ -1.68
CSMD1-211ENST00000523062 LINC00337Q8N6G1 96 aa4.55□□□□□ -1.68
CSMD1-211ENST00000523062 LINC00526Q96FQ7 95 aa4.55□□□□□ -1.68
CSMD1-211ENST00000523062 CAMK2N2Q96S95 79 aa4.55□□□□□ -1.68
CSMD1-211ENST00000523062 C6orf48Q9UBA6 75 aa4.55□□□□□ -1.68
CSMD1-211ENST00000523062 APLNQ9ULZ1 77 aa4.55□□□□□ -1.68
CSMD1-211ENST00000523062 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
CSMD1-211ENST00000523062 LST1O00453 97 aa4.54□□□□□ -1.68
CSMD1-211ENST00000523062 RPL28P46779 137 aaKnown RBP4.54□□□□□ -1.68
CSMD1-211ENST00000523062 WFDC2Q14508 124 aa4.54□□□□□ -1.68
CSMD1-211ENST00000523062 LINC01620Q4KN68 170 aa4.54□□□□□ -1.68
CSMD1-211ENST00000523062 OCIAD2Q56VL3 154 aa4.54□□□□□ -1.68
CSMD1-211ENST00000523062 MTURNQ8N3F0 131 aa4.54□□□□□ -1.68
CSMD1-211ENST00000523062 HUWE1Q7Z6Z7 4374 aaKnown RBP4.54□□□□□ -1.68
CSMD1-211ENST00000523062 C9JAW5 83 aa4.53□□□□□ -1.68
CSMD1-211ENST00000523062 K7ERU9 68 aa4.53□□□□□ -1.68
CSMD1-211ENST00000523062 M0QXV9 152 aa4.53□□□□□ -1.68
CSMD1-211ENST00000523062 KRTAP10-6P60371 365 aaPredicted RBP4.53□□□□□ -1.68
CSMD1-211ENST00000523062 Q6ZRU5 148 aa4.53□□□□□ -1.68
CSMD1-211ENST00000523062 CLEC2BQ92478 149 aa4.53□□□□□ -1.68
CSMD1-211ENST00000523062 USP17L23D6RBM5 183 aa4.52□□□□□ -1.69
CSMD1-211ENST00000523062 SLC25A20O43772 301 aa4.52□□□□□ -1.69
CSMD1-211ENST00000523062 SYCNQ0VAF6 134 aa4.52□□□□□ -1.69
CSMD1-211ENST00000523062 OR13C6PQ8NH95 151 aa4.52□□□□□ -1.69
CSMD1-211ENST00000523062 SMIM11BQ8TCY0 68 aa4.52□□□□□ -1.69
CSMD1-211ENST00000523062 CDIP1Q9H305 208 aa4.52□□□□□ -1.69
CSMD1-211ENST00000523062 STAB2Q8WWQ8 2551 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 TRBV10-2A0A0K0K1G8 114 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 NDUFC2-KCTD14E9PQ53 114 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 H0YGX0 51 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 H3BT86 120 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 NCR3O14931 201 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 TRACP01848 142 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 ETDBQ3ZM63 59 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 TTC32Q5I0X7 151 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 CARD19Q96LW7 228 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 LINC01600Q96MT4 127 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 TMEM126AQ9H061 195 aa4.51□□□□□ -1.69
CSMD1-211ENST00000523062 J3QR89 54 aa4.5□□□□□ -1.69
CSMD1-211ENST00000523062 TEN1Q86WV5 123 aa4.5□□□□□ -1.69
CSMD1-211ENST00000523062 ANKRD29Q8N6D5 301 aa4.5□□□□□ -1.69
CSMD1-211ENST00000523062 S100A7L2Q5SY68 101 aa4.49□□□□□ -1.69
CSMD1-211ENST00000523062 CASC10Q5T4H9 136 aa4.49□□□□□ -1.69
CSMD1-211ENST00000523062 Q8NDZ9 215 aa4.49□□□□□ -1.69
CSMD1-211ENST00000523062 PPDPFLQ8WWR9 84 aa4.49□□□□□ -1.69
CSMD1-211ENST00000523062 XAGE1AQ9HD64 81 aa4.49□□□□□ -1.69
CSMD1-211ENST00000523062 TLX1NBP0CAT3 122 aa4.48□□□□□ -1.69
CSMD1-211ENST00000523062 PRR3P79522 188 aaKnown RBP4.48□□□□□ -1.69
CSMD1-211ENST00000523062 RPL18AQ02543 176 aaKnown RBP4.48□□□□□ -1.69
CSMD1-211ENST00000523062 FAM218AQ96MZ4 157 aa4.48□□□□□ -1.69
CSMD1-211ENST00000523062 KRTAP1-5Q9BYS1 174 aa4.48□□□□□ -1.69
CSMD1-211ENST00000523062 DNAH9Q9NYC9 4486 aa4.48□□□□□ -1.69
CSMD1-211ENST00000523062 PSCAO43653 123 aa4.47□□□□□ -1.69
CSMD1-211ENST00000523062 DNAL4O96015 105 aa4.47□□□□□ -1.69
CSMD1-211ENST00000523062 IGLV6-57P01721 117 aa4.47□□□□□ -1.69
CSMD1-211ENST00000523062 VPREB1P12018 145 aa4.47□□□□□ -1.69
CSMD1-211ENST00000523062 GAGE2EQ4V326 116 aa4.47□□□□□ -1.69
CSMD1-211ENST00000523062 C14orf177Q52M58 125 aa4.47□□□□□ -1.69
CSMD1-211ENST00000523062 Q6ZRP5 223 aa4.47□□□□□ -1.69
CSMD1-211ENST00000523062 GAGE2DQ9UEU5 116 aa4.47□□□□□ -1.69
CSMD1-211ENST00000523062 CBY1Q9Y3M2 126 aa4.47□□□□□ -1.69
CSMD1-211ENST00000523062 NBDYA0A0U1RRE5 68 aa4.46□□□□□ -1.7
CSMD1-211ENST00000523062 A0A1B0GX51 115 aa4.46□□□□□ -1.7
CSMD1-211ENST00000523062 M0R378 163 aa4.46□□□□□ -1.7
CSMD1-211ENST00000523062 LECT2O14960 151 aa4.46□□□□□ -1.7
CSMD1-211ENST00000523062 TRAV23DV6A0A075B6W5 121 aa4.45□□□□□ -1.7
CSMD1-211ENST00000523062 A0A087WYN8 130 aa4.45□□□□□ -1.7
CSMD1-211ENST00000523062 TRBV10-3A0A0K0K1G6 114 aa4.45□□□□□ -1.7
CSMD1-211ENST00000523062 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
CSMD1-211ENST00000523062 SNCGO76070 127 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms