RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 TOMM7Q9P0U1 55 aa3.4□□□□□ -1.87
VPS13B-211ENST00000522802 ARPC5O15511 151 aa3.39□□□□□ -1.87
VPS13B-211ENST00000522802 CKS1BP61024 79 aa3.39□□□□□ -1.87
VPS13B-211ENST00000522802 MRPS36P82909 103 aaKnown RBP3.39□□□□□ -1.87
VPS13B-211ENST00000522802 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
VPS13B-211ENST00000522802 FAM19A1Q7Z5A9 133 aa3.39□□□□□ -1.87
VPS13B-211ENST00000522802 TMEM191AQ9H0A3 160 aa3.39□□□□□ -1.87
VPS13B-211ENST00000522802 UMAD1C9J7I0 102 aa3.38□□□□□ -1.87
VPS13B-211ENST00000522802 GIPP09681 153 aaPredicted RBP3.38□□□□□ -1.87
VPS13B-211ENST00000522802 SPRR4Q96PI1 79 aa3.38□□□□□ -1.87
VPS13B-211ENST00000522802 TMEM126AQ9H061 195 aa3.38□□□□□ -1.87
VPS13B-211ENST00000522802 GEMIN7Q9H840 131 aaKnown RBP3.38□□□□□ -1.87
VPS13B-211ENST00000522802 BIN3Q9NQY0 253 aa3.38□□□□□ -1.87
VPS13B-211ENST00000522802 MED9Q9NWA0 146 aa3.38□□□□□ -1.87
VPS13B-211ENST00000522802 NDUFA12Q9UI09 145 aa3.38□□□□□ -1.87
VPS13B-211ENST00000522802 LOC105371267A0A1B0GV96 52 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 A8MU10 97 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 F8VRH5 84 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 M0R378 163 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 PDE6DO43924 150 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 ATP6V1G1O75348 118 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 SPINK1P00995 79 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 Q8IZM0 81 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 NKAPP1Q8N9T2 125 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 S100ZQ8WXG8 99 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 HIGD2AQ9BW72 106 aa3.37□□□□□ -1.87
VPS13B-211ENST00000522802 A0A1B0GUT8 65 aa3.36□□□□□ -1.87
VPS13B-211ENST00000522802 HIGD1CA8MV81 97 aa3.36□□□□□ -1.87
VPS13B-211ENST00000522802 TCAPO15273 167 aa3.36□□□□□ -1.87
VPS13B-211ENST00000522802 GATCO43716 136 aaKnown RBP3.36□□□□□ -1.87
VPS13B-211ENST00000522802 VAMP3Q15836 100 aa3.36□□□□□ -1.87
VPS13B-211ENST00000522802 C6orf226Q5I0X4 101 aa3.36□□□□□ -1.87
VPS13B-211ENST00000522802 CBLN2Q8IUK8 224 aa3.36□□□□□ -1.87
VPS13B-211ENST00000522802 FAM19A2Q8N3H0 131 aa3.36□□□□□ -1.87
VPS13B-211ENST00000522802 SMIM2Q9BVW6 85 aa3.36□□□□□ -1.87
VPS13B-211ENST00000522802 A8MWL6 223 aa3.35□□□□□ -1.87
VPS13B-211ENST00000522802 SMLR1H3BR10 107 aa3.35□□□□□ -1.87
VPS13B-211ENST00000522802 PPP1R2P9O14990 202 aa3.35□□□□□ -1.87
VPS13B-211ENST00000522802 SLC51BQ86UW2 128 aa3.35□□□□□ -1.87
VPS13B-211ENST00000522802 LINC01561Q8N1V8 128 aa3.35□□□□□ -1.87
VPS13B-211ENST00000522802 BORCS7Q96B45 105 aa3.35□□□□□ -1.87
VPS13B-211ENST00000522802 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
VPS13B-211ENST00000522802 C9orf92A6NGG3 77 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 SLC25A20O43772 301 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 SNAPINO95295 136 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 PPP1R17O96001 155 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 IFI27P40305 119 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-211ENST00000522802 CEBPGP53567 150 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 RPS29P62273 56 aaKnown RBP3.34□□□□□ -1.87
VPS13B-211ENST00000522802 MOBPQ13875 183 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 MRPL51Q4U2R6 128 aaKnown RBP3.34□□□□□ -1.87
VPS13B-211ENST00000522802 Q6ZN92 141 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 LINC00299Q6ZSB3 139 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 Q8NDZ9 215 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 TMEM141Q96I45 108 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 C20orf78Q9BR46 151 aa3.34□□□□□ -1.87
VPS13B-211ENST00000522802 S100A1P23297 94 aa3.33□□□□□ -1.88
VPS13B-211ENST00000522802 TEX43Q6ZNM6 134 aa3.33□□□□□ -1.88
VPS13B-211ENST00000522802 FAM231DQ6ZW35 169 aa3.33□□□□□ -1.88
VPS13B-211ENST00000522802 GNB1LQ9BYB4 327 aa3.33□□□□□ -1.88
VPS13B-211ENST00000522802 EIF5A2Q9GZV4 153 aaKnown RBP3.33□□□□□ -1.88
VPS13B-211ENST00000522802 CDKN2A-AS1Q9UH64 79 aa3.33□□□□□ -1.88
VPS13B-211ENST00000522802 TRBV24-1A0A075B6N3 115 aa3.32□□□□□ -1.88
VPS13B-211ENST00000522802 A0A0U1RRA0 63 aa3.32□□□□□ -1.88
VPS13B-211ENST00000522802 NPYP01303 97 aa3.32□□□□□ -1.88
VPS13B-211ENST00000522802 RAB5BP61020 215 aa3.32□□□□□ -1.88
VPS13B-211ENST00000522802 FAM104BQ5XKR9 115 aa3.32□□□□□ -1.88
VPS13B-211ENST00000522802 ZNF706Q9Y5V0 76 aaPredicted RBP3.32□□□□□ -1.88
VPS13B-211ENST00000522802 D6R8Y8 96 aa3.31□□□□□ -1.88
VPS13B-211ENST00000522802 CXCL5P42830 114 aa3.31□□□□□ -1.88
VPS13B-211ENST00000522802 SEC61GP60059 68 aa3.31□□□□□ -1.88
VPS13B-211ENST00000522802 CXCL6P80162 114 aa3.31□□□□□ -1.88
VPS13B-211ENST00000522802 ZNF345Q14585 488 aa3.31□□□□□ -1.88
VPS13B-211ENST00000522802 NDUFA5Q16718 116 aa3.31□□□□□ -1.88
VPS13B-211ENST00000522802 C2orf88Q9BSF0 95 aa3.31□□□□□ -1.88
VPS13B-211ENST00000522802 NDUFA13Q9P0J0 144 aa3.31□□□□□ -1.88
VPS13B-211ENST00000522802 CKS2P33552 79 aa3.3□□□□□ -1.88
VPS13B-211ENST00000522802 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
VPS13B-211ENST00000522802 LINC00483Q53H64 154 aa3.3□□□□□ -1.88
VPS13B-211ENST00000522802 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
VPS13B-211ENST00000522802 AMELXQ99217 191 aa3.3□□□□□ -1.88
VPS13B-211ENST00000522802 KANTRA0A1W2PQU2 76 aa3.29□□□□□ -1.88
VPS13B-211ENST00000522802 LINC00862A6NCI5 91 aa3.29□□□□□ -1.88
VPS13B-211ENST00000522802 MT2AP02795 61 aa3.29□□□□□ -1.88
VPS13B-211ENST00000522802 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
VPS13B-211ENST00000522802 COX7B2Q8TF08 81 aa3.29□□□□□ -1.88
VPS13B-211ENST00000522802 RAB5AP20339 215 aa3.28□□□□□ -1.88
VPS13B-211ENST00000522802 PFN2P35080 140 aa3.28□□□□□ -1.88
VPS13B-211ENST00000522802 HERVK_113P63121 156 aa3.28□□□□□ -1.88
VPS13B-211ENST00000522802 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
VPS13B-211ENST00000522802 ERASQ7Z444 233 aa3.28□□□□□ -1.88
VPS13B-211ENST00000522802 LINC01551Q86U37 167 aa3.28□□□□□ -1.88
VPS13B-211ENST00000522802 SMCR5Q8TEV8 140 aa3.28□□□□□ -1.88
VPS13B-211ENST00000522802 SND1-IT1Q9HBX3 110 aa3.28□□□□□ -1.88
VPS13B-211ENST00000522802 BATF3Q9NR55 127 aa3.28□□□□□ -1.88
VPS13B-211ENST00000522802 V9GYV3 84 aa3.28□□□□□ -1.88
VPS13B-211ENST00000522802 TEX46H3BTG2 121 aa3.27□□□□□ -1.89
VPS13B-211ENST00000522802 MT1FP04733 61 aa3.27□□□□□ -1.89
VPS13B-211ENST00000522802 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
VPS13B-211ENST00000522802 C5orf47Q569G3 176 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms