RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 PSCAO43653 123 aa8.25□□□□□ -1.09
PABPC1-219ENST00000522387 TTC32Q5I0X7 151 aa8.25□□□□□ -1.09
PABPC1-219ENST00000522387 IGLV5-45A0A087WSX0 123 aa8.24□□□□□ -1.09
PABPC1-219ENST00000522387 Q6ZR54 194 aa8.24□□□□□ -1.09
PABPC1-219ENST00000522387 CIRBPQ14011 172 aaKnown RBP8.23□□□□□ -1.09
PABPC1-219ENST00000522387 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
PABPC1-219ENST00000522387 HERVK_113P63121 156 aa8.22□□□□□ -1.09
PABPC1-219ENST00000522387 NDUFV3P56181 108 aaKnown RBP8.21□□□□□ -1.09
PABPC1-219ENST00000522387 C1orf134Q5TEV5 83 aa8.21□□□□□ -1.09
PABPC1-219ENST00000522387 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.09
PABPC1-219ENST00000522387 DNAH6Q9C0G6 4158 aa8.21□□□□□ -1.09
PABPC1-219ENST00000522387 IGLV5-39A0A0G2JS06 123 aa8.21□□□□□ -1.1
PABPC1-219ENST00000522387 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
PABPC1-219ENST00000522387 MALP21145 153 aa8.21□□□□□ -1.1
PABPC1-219ENST00000522387 FUSP35637 526 aaKnown RBP eCLIP8.21□□□□□ -1.1
PABPC1-219ENST00000522387 Q6Q795 121 aa8.21□□□□□ -1.1
PABPC1-219ENST00000522387 C6orf223Q8N319 242 aa8.21□□□□□ -1.1
PABPC1-219ENST00000522387 FAT2Q9NYQ8 4349 aa8.21□□□□□ -1.1
PABPC1-219ENST00000522387 IGHV3OR16-9A0A0B4J2B5 98 aa8.2□□□□□ -1.1
PABPC1-219ENST00000522387 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
PABPC1-219ENST00000522387 HIGD2BQ4VC39 106 aa8.2□□□□□ -1.1
PABPC1-219ENST00000522387 KRTAP26-1Q6PEX3 210 aa8.2□□□□□ -1.1
PABPC1-219ENST00000522387 TOMM7Q9P0U1 55 aa8.19□□□□□ -1.1
PABPC1-219ENST00000522387 DNAH17Q9UFH2 4485 aa8.19□□□□□ -1.1
PABPC1-219ENST00000522387 COX7A2LO14548 114 aa8.19□□□□□ -1.1
PABPC1-219ENST00000522387 PKHD1P08F94 4074 aa8.18□□□□□ -1.1
PABPC1-219ENST00000522387 Q6ZRN7 208 aaPredicted RBP8.18□□□□□ -1.1
PABPC1-219ENST00000522387 FAM240AA0A1B0GVK7 77 aa8.18□□□□□ -1.1
PABPC1-219ENST00000522387 SOSTDC1Q6X4U4 206 aa8.18□□□□□ -1.1
PABPC1-219ENST00000522387 FAM19A3Q7Z5A8 133 aa8.18□□□□□ -1.1
PABPC1-219ENST00000522387 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
PABPC1-219ENST00000522387 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
PABPC1-219ENST00000522387 RMI2Q96E14 147 aa8.17□□□□□ -1.1
PABPC1-219ENST00000522387 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-219ENST00000522387 B5MCH6 92 aa8.17□□□□□ -1.1
PABPC1-219ENST00000522387 SS18L2Q9UHA2 77 aa8.17□□□□□ -1.1
PABPC1-219ENST00000522387 HECTD4Q9Y4D8 3996 aa8.16□□□□□ -1.1
PABPC1-219ENST00000522387 USP17L23D6RBM5 183 aa8.16□□□□□ -1.1
PABPC1-219ENST00000522387 RTL8CO15255 209 aa8.16□□□□□ -1.1
PABPC1-219ENST00000522387 A0A087WZ39 114 aa8.15□□□□□ -1.1
PABPC1-219ENST00000522387 TNP2Q05952 138 aa8.15□□□□□ -1.1
PABPC1-219ENST00000522387 CCDC179H3BU77 68 aa8.14□□□□□ -1.11
PABPC1-219ENST00000522387 C15orf56Q8N910 161 aa8.14□□□□□ -1.11
PABPC1-219ENST00000522387 PKD1P98161 4303 aa8.13□□□□□ -1.11
PABPC1-219ENST00000522387 HERV-K104P63124 156 aa8.13□□□□□ -1.11
PABPC1-219ENST00000522387 LRCOL1A6NCL2 159 aa8.12□□□□□ -1.11
PABPC1-219ENST00000522387 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
PABPC1-219ENST00000522387 C6orf226Q5I0X4 101 aa8.12□□□□□ -1.11
PABPC1-219ENST00000522387 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
PABPC1-219ENST00000522387 TRACP01848 142 aa8.11□□□□□ -1.11
PABPC1-219ENST00000522387 SPAG11BQ08648 103 aa8.11□□□□□ -1.11
PABPC1-219ENST00000522387 COX7B2Q8TF08 81 aa8.11□□□□□ -1.11
PABPC1-219ENST00000522387 A0A087WTM6 91 aa8.11□□□□□ -1.11
PABPC1-219ENST00000522387 TRBV7-7A0A0K0K1E9 115 aa8.11□□□□□ -1.11
PABPC1-219ENST00000522387 ACYP1P07311 99 aa8.11□□□□□ -1.11
PABPC1-219ENST00000522387 BAALC-AS2P0C853 105 aa8.1□□□□□ -1.11
PABPC1-219ENST00000522387 SLPIP03973 132 aa8.09□□□□□ -1.11
PABPC1-219ENST00000522387 FAM218AQ96MZ4 157 aa8.09□□□□□ -1.11
PABPC1-219ENST00000522387 PFN2P35080 140 aa8.09□□□□□ -1.11
PABPC1-219ENST00000522387 C10orf25Q5T742 122 aa8.09□□□□□ -1.11
PABPC1-219ENST00000522387 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.11
PABPC1-219ENST00000522387 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
PABPC1-219ENST00000522387 CFAP161Q6P656 301 aa8.08□□□□□ -1.12
PABPC1-219ENST00000522387 UNQ6190/PRO20217Q6UXQ8 127 aa8.08□□□□□ -1.12
PABPC1-219ENST00000522387 TRAV13-2A0A0B4J235 113 aa8.08□□□□□ -1.12
PABPC1-219ENST00000522387 KIAA0087Q14695 138 aa8.08□□□□□ -1.12
PABPC1-219ENST00000522387 CAMK2N2Q96S95 79 aa8.08□□□□□ -1.12
PABPC1-219ENST00000522387 Q8N814 137 aa8.07□□□□□ -1.12
PABPC1-219ENST00000522387 SMCR5Q8TEV8 140 aa8.07□□□□□ -1.12
PABPC1-219ENST00000522387 C22orf24Q9Y442 160 aa8.07□□□□□ -1.12
PABPC1-219ENST00000522387 DNAH5Q8TE73 4624 aa8.07□□□□□ -1.12
PABPC1-219ENST00000522387 Q6ZRU5 148 aa8.07□□□□□ -1.12
PABPC1-219ENST00000522387 MIR7-3HGQ8N6C7 128 aa8.07□□□□□ -1.12
PABPC1-219ENST00000522387 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
PABPC1-219ENST00000522387 KRTAP10-2P60368 255 aa8.06□□□□□ -1.12
PABPC1-219ENST00000522387 GVQW2A0A096LPI5 108 aaPredicted RBP8.06□□□□□ -1.12
PABPC1-219ENST00000522387 LINC00158P58513 81 aa8.06□□□□□ -1.12
PABPC1-219ENST00000522387 LINC00643Q86TS7 51 aa8.06□□□□□ -1.12
PABPC1-219ENST00000522387 LINC00337Q8N6G1 96 aa8.06□□□□□ -1.12
PABPC1-219ENST00000522387 SVIPQ8NHG7 77 aa8.06□□□□□ -1.12
PABPC1-219ENST00000522387 SND1-IT1Q9HBX3 110 aa8.06□□□□□ -1.12
PABPC1-219ENST00000522387 Q8IZM0 81 aa8.05□□□□□ -1.12
PABPC1-219ENST00000522387 IMUPQ9GZP8 106 aa8.05□□□□□ -1.12
PABPC1-219ENST00000522387 IGKV2-28A0A075B6P5 120 aa8.04□□□□□ -1.12
PABPC1-219ENST00000522387 FAM236AA0A1B0GUQ0 79 aa8.04□□□□□ -1.12
PABPC1-219ENST00000522387 FAM236BA0A1B0GV22 79 aa8.04□□□□□ -1.12
PABPC1-219ENST00000522387 IGKV2D-28P01615 120 aa8.04□□□□□ -1.12
PABPC1-219ENST00000522387 INAFM2P0DMQ5 153 aa8.03□□□□□ -1.12
PABPC1-219ENST00000522387 SYCNQ0VAF6 134 aa8.03□□□□□ -1.12
PABPC1-219ENST00000522387 GAGE2AQ6NT46 116 aa8.02□□□□□ -1.13
PABPC1-219ENST00000522387 SMIM11BQ8TCY0 68 aa8.02□□□□□ -1.13
PABPC1-219ENST00000522387 C6orf48Q9UBA6 75 aa8.02□□□□□ -1.13
PABPC1-219ENST00000522387 SDIM1Q6ZPB5 146 aa8.02□□□□□ -1.13
PABPC1-219ENST00000522387 LINC01561Q8N1V8 128 aa8.02□□□□□ -1.13
PABPC1-219ENST00000522387 EPPK1P58107 5090 aaKnown RBP8.02□□□□□ -1.13
PABPC1-219ENST00000522387 A0A087WYN8 130 aa8.01□□□□□ -1.13
PABPC1-219ENST00000522387 IGLV5-52A0A0A0MRZ9 124 aa8.01□□□□□ -1.13
PABPC1-219ENST00000522387 DNAL4O96015 105 aa8.01□□□□□ -1.13
PABPC1-219ENST00000522387 C14orf177Q52M58 125 aa8.01□□□□□ -1.13
PABPC1-219ENST00000522387 RPL18AQ02543 176 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 262.1 ms