RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 FN1P02751 2386 aaKnown RBP1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRBV27A0A0K0K1C4 114 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 A0A1B0GV72 72 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 A8MTW9 85 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 LEPROTO15243 131 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 TCL1BO95988 128 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 P0DMU3 169 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 FAM231AP0DMU4 169 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 FAM231CP0DMU5 169 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 CRYBA4P53673 196 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 RPL39P62891 51 aaKnown RBP1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 PCOTHQ58A44 107 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 Q6ZUT4 128 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 C10orf126Q8N4M7 172 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 ANKRD29Q8N6D5 301 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 ZNF418Q8TF45 676 aaPredicted RBP1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 TMEM263Q8WUH6 116 aaKnown RBP1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 TMEM141Q96I45 108 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 USMG5Q96IX5 58 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 CARD19Q96LW7 228 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 BPESC1Q9GZL8 116 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 NAV2Q8IVL1 2488 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 ASPMQ8IZT6 3477 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 JMJD1CQ15652 2540 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 BOD1L1Q8NFC6 3051 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 ACACBO00763 2458 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRBV20-1A0A075B6N2 111 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRGV4A0A0C4DH28 118 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 C19orf84I3L1E1 186 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 J3QQQ9 107 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 M0QY20 66 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 M0R2P5 195 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 IGHV3-33P01772 117 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 MT-ATP8P03928 68 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 S100A4P26447 101 aaKnown RBP1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 PSMB8P28062 276 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 EMP1P54849 157 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 KRTAP12-3P60328 96 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 MRPS36P82909 103 aaKnown RBP1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 ZNF56Q15929 161 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 KRTAP13-4Q3LI77 160 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 C10orf105Q8TEF2 133 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 RHPN1-AS1Q9BWJ2 59 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 SPANXDQ9BXN6 97 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 XAGE1AQ9HD64 81 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 SPANXCQ9NY87 97 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 ATMQ13315 3056 aa1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 USP9YO00507 2555 aaPredicted RBP1.39□□□□□ -2.19
HMGN1P28-201ENST00000521340 SMG1Q96Q15 3661 aaKnown RBP1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 A0A096LNT2 108 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRAV2A0A0B4J234 112 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRAV12-3A0A0B4J271 114 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 LOC107984156A0A0G2JMH3 177 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRBV30A0A0K0K1B3 111 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 A8MWV9 139 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 C9JAW5 83 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 H3BT86 120 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 H3BUX3 64 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 I3L3M4 83 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 TIMM17BO60830 172 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 SPINK8P0C7L1 97 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 RPL28P46779 137 aaKnown RBP1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 CKS1BP61024 79 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 SPINK13Q1W4C9 94 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 DEFB121Q5J5C9 76 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 TMEM170BQ5T4T1 132 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 FAM74A4Q5TZK3 123 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 Q6Q795 121 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 ARL17AQ8IVW1 177 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 LINC00467Q9BRT7 94 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 TIMM21Q9BVV7 248 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 SPANXA1Q9NS26 97 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 PRO1854Q9UHT4 67 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 ERG28Q9UKR5 140 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 C2CD3Q4AC94 2353 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 DCHS1Q96JQ0 3298 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 SONP18583 2426 aaKnown RBP1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 FAM208BQ5VWN6 2430 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 ADGRG4Q8IZF6 3080 aa1.38□□□□□ -2.19
HMGN1P28-201ENST00000521340 PIEZO1Q92508 2521 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 ITPR3Q14573 2671 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 KALRNO60229 2985 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 IGHV3-64A0A075B6Q5 118 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRAV12-2A0A075B6T6 113 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRAV7A0A075B6U4 112 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 IGHV1-58A0A0C4DH39 117 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRBV7-7A0A0K0K1E9 115 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRBV10-2A0A0K0K1G8 114 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 NDUFA1O15239 70 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 MSMBP08118 114 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 SNRPD3P62318 126 aaKnown RBP1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 BLCAPP62952 87 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 ATXN8Q156A1 80 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 SFTA2Q6UW10 78 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 C10orf99Q6UWK7 81 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 Q6ZRN7 208 aaPredicted RBP1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 CCL19Q99731 98 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 262.9 ms