RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 CDIP1Q9H305 208 aa11.64□□□□□ -0.55
PABPC1-217ENST00000521067 LINC00614P0C842 121 aa11.63□□□□□ -0.55
PABPC1-217ENST00000521067 CBLN2Q8IUK8 224 aa11.63□□□□□ -0.55
PABPC1-217ENST00000521067 C18orf32Q8TCD1 76 aa11.63□□□□□ -0.55
PABPC1-217ENST00000521067 BAGE3Q86Y29 109 aa11.61□□□□□ -0.55
PABPC1-217ENST00000521067 HBDP02042 147 aa11.6□□□□□ -0.55
PABPC1-217ENST00000521067 CTAG1AP78358 180 aa11.6□□□□□ -0.55
PABPC1-217ENST00000521067 C10orf91Q5T1B1 145 aa11.6□□□□□ -0.55
PABPC1-217ENST00000521067 TMEM170BQ5T4T1 132 aa11.6□□□□□ -0.55
PABPC1-217ENST00000521067 HIGD2AQ9BW72 106 aa11.6□□□□□ -0.55
PABPC1-217ENST00000521067 RPS10P5Q9NQ39 176 aa11.59□□□□□ -0.55
PABPC1-217ENST00000521067 PPDPFQ9H3Y8 114 aa11.58□□□□□ -0.56
PABPC1-217ENST00000521067 A0A0U1RRA0 63 aa11.57□□□□□ -0.56
PABPC1-217ENST00000521067 LINC00158P58513 81 aa11.57□□□□□ -0.56
PABPC1-217ENST00000521067 SPRR4Q96PI1 79 aa11.57□□□□□ -0.56
PABPC1-217ENST00000521067 TRAPPC1Q9Y5R8 145 aa11.57□□□□□ -0.56
PABPC1-217ENST00000521067 COMMD7Q86VX2 200 aa11.56□□□□□ -0.56
PABPC1-217ENST00000521067 RHEBQ15382 184 aa11.55□□□□□ -0.56
PABPC1-217ENST00000521067 SFTA2Q6UW10 78 aa11.54□□□□□ -0.56
PABPC1-217ENST00000521067 CHTOPQ9Y3Y2 248 aaKnown RBP11.53□□□□□ -0.56
PABPC1-217ENST00000521067 TMEM223A0PJW6 202 aa11.52□□□□□ -0.57
PABPC1-217ENST00000521067 SPAG11AQ6PDA7 123 aa11.52□□□□□ -0.57
PABPC1-217ENST00000521067 SMIM13P0DJ93 91 aa11.51□□□□□ -0.57
PABPC1-217ENST00000521067 DAND5Q8N907 189 aa11.51□□□□□ -0.57
PABPC1-217ENST00000521067 SPRR1AP35321 89 aa11.49□□□□□ -0.57
PABPC1-217ENST00000521067 KRTAP4-16G5E9R7 235 aaPredicted RBP11.48□□□□□ -0.57
PABPC1-217ENST00000521067 BOD1L2Q8IYS8 172 aa11.48□□□□□ -0.57
PABPC1-217ENST00000521067 Q8NBF4 154 aa11.48□□□□□ -0.57
PABPC1-217ENST00000521067 SMCR5Q8TEV8 140 aa11.48□□□□□ -0.57
PABPC1-217ENST00000521067 TRAV12-1A0A0B4J245 112 aa11.46□□□□□ -0.57
PABPC1-217ENST00000521067 PRYO14603 147 aa11.46□□□□□ -0.57
PABPC1-217ENST00000521067 NCR3O14931 201 aa11.46□□□□□ -0.57
PABPC1-217ENST00000521067 KRTAP13-3Q3SY46 172 aa11.46□□□□□ -0.57
PABPC1-217ENST00000521067 FP248Q71RG6 208 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-217ENST00000521067 MIR7-3HGQ8N6C7 128 aa11.46□□□□□ -0.57
PABPC1-217ENST00000521067 LINC00337Q8N6G1 96 aa11.46□□□□□ -0.57
PABPC1-217ENST00000521067 KCNQ1DNQ9H478 68 aa11.46□□□□□ -0.57
PABPC1-217ENST00000521067 C4orf48Q5BLP8 95 aa11.45□□□□□ -0.58
PABPC1-217ENST00000521067 ZNF706Q9Y5V0 76 aaPredicted RBP11.45□□□□□ -0.58
PABPC1-217ENST00000521067 IFI27L1Q96BM0 104 aa11.44□□□□□ -0.58
PABPC1-217ENST00000521067 TRBV10-3A0A0K0K1G6 114 aa11.42□□□□□ -0.58
PABPC1-217ENST00000521067 ATP6V1G1O75348 118 aa11.42□□□□□ -0.58
PABPC1-217ENST00000521067 MEIG1Q5JSS6 88 aa11.42□□□□□ -0.58
PABPC1-217ENST00000521067 LINC00483Q53H64 154 aa11.41□□□□□ -0.58
PABPC1-217ENST00000521067 KRTAP4-1Q9BYQ7 146 aa11.41□□□□□ -0.58
PABPC1-217ENST00000521067 ETDCA0A1B0GVM5 59 aa11.4□□□□□ -0.58
PABPC1-217ENST00000521067 ERC2-IT1O76042 136 aa11.4□□□□□ -0.58
PABPC1-217ENST00000521067 APOC3P02656 99 aa11.4□□□□□ -0.58
PABPC1-217ENST00000521067 CHCHD1Q96BP2 118 aaKnown RBP11.4□□□□□ -0.58
PABPC1-217ENST00000521067 YPEL4Q96NS1 127 aa11.4□□□□□ -0.58
PABPC1-217ENST00000521067 KRTAP9-6A0A140TA67 174 aa11.39□□□□□ -0.59
PABPC1-217ENST00000521067 SPINK1P00995 79 aa11.39□□□□□ -0.59
PABPC1-217ENST00000521067 HERV-K104P63124 156 aa11.39□□□□□ -0.59
PABPC1-217ENST00000521067 ASB16-AS1Q495Z4 193 aa11.39□□□□□ -0.59
PABPC1-217ENST00000521067 NDUFA12Q9UI09 145 aa11.39□□□□□ -0.59
PABPC1-217ENST00000521067 GAGE2AQ6NT46 116 aa11.38□□□□□ -0.59
PABPC1-217ENST00000521067 B5MCH6 92 aa11.37□□□□□ -0.59
PABPC1-217ENST00000521067 TSPEAR-AS2P59090 65 aa11.37□□□□□ -0.59
PABPC1-217ENST00000521067 FAM19A2Q8N3H0 131 aa11.37□□□□□ -0.59
PABPC1-217ENST00000521067 MYMXA0A1B0GTQ4 84 aa11.34□□□□□ -0.59
PABPC1-217ENST00000521067 Q9BRP9 147 aa11.34□□□□□ -0.59
PABPC1-217ENST00000521067 LOC107984156A0A0G2JMH3 177 aa11.33□□□□□ -0.6
PABPC1-217ENST00000521067 LINC00587B1AMM8 73 aa11.33□□□□□ -0.6
PABPC1-217ENST00000521067 SNAPINO95295 136 aa11.33□□□□□ -0.6
PABPC1-217ENST00000521067 MOBPQ13875 183 aa11.33□□□□□ -0.6
PABPC1-217ENST00000521067 ARL17AQ8IVW1 177 aa11.33□□□□□ -0.6
PABPC1-217ENST00000521067 Q8N377 158 aa11.33□□□□□ -0.6
PABPC1-217ENST00000521067 IGLV9-49A0A0B4J1Y8 123 aa11.32□□□□□ -0.6
PABPC1-217ENST00000521067 SVBPQ8N300 66 aa11.32□□□□□ -0.6
PABPC1-217ENST00000521067 MAP1LC3CQ9BXW4 147 aa11.31□□□□□ -0.6
PABPC1-217ENST00000521067 H0Y8G0 127 aa11.3□□□□□ -0.6
PABPC1-217ENST00000521067 DDTP30046 118 aa11.3□□□□□ -0.6
PABPC1-217ENST00000521067 SSBP3-AS1Q7Z2R9 100 aa11.3□□□□□ -0.6
PABPC1-217ENST00000521067 HSBP1O75506 76 aa11.29□□□□□ -0.6
PABPC1-217ENST00000521067 TRBV10-2A0A0K0K1G8 114 aa11.28□□□□□ -0.6
PABPC1-217ENST00000521067 LEPROTO15243 131 aa11.28□□□□□ -0.6
PABPC1-217ENST00000521067 LINC00310P59036 64 aa11.27□□□□□ -0.61
PABPC1-217ENST00000521067 RPS29P62273 56 aaKnown RBP11.27□□□□□ -0.61
PABPC1-217ENST00000521067 Q6ZRX8 168 aa11.27□□□□□ -0.61
PABPC1-217ENST00000521067 SEC61BP60468 96 aaKnown RBP11.26□□□□□ -0.61
PABPC1-217ENST00000521067 S100A12P80511 92 aa11.26□□□□□ -0.61
PABPC1-217ENST00000521067 NDUFA5Q16718 116 aa11.26□□□□□ -0.61
PABPC1-217ENST00000521067 EIF4EBP3O60516 100 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-217ENST00000521067 IGLV6-57P01721 117 aa11.25□□□□□ -0.61
PABPC1-217ENST00000521067 J3QQQ9 107 aa11.24□□□□□ -0.61
PABPC1-217ENST00000521067 LINC01547P58512 204 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-217ENST00000521067 SPANXB1Q9NS25 103 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-217ENST00000521067 LEPROTL1O95214 131 aa11.23□□□□□ -0.61
PABPC1-217ENST00000521067 PMCHL2Q9BQD1 86 aa11.23□□□□□ -0.61
PABPC1-217ENST00000521067 SLC25A20O43772 301 aa11.22□□□□□ -0.61
PABPC1-217ENST00000521067 TRGC2P03986 189 aa11.22□□□□□ -0.61
PABPC1-217ENST00000521067 XP32Q5T750 250 aa11.22□□□□□ -0.61
PABPC1-217ENST00000521067 SOSTDC1Q6X4U4 206 aa11.22□□□□□ -0.61
PABPC1-217ENST00000521067 SERF1AO75920 110 aa11.21□□□□□ -0.61
PABPC1-217ENST00000521067 NDUFC2O95298 119 aa11.21□□□□□ -0.61
PABPC1-217ENST00000521067 ST20-AS1Q8NBB2 130 aa11.21□□□□□ -0.61
PABPC1-217ENST00000521067 PLNP26678 52 aa11.2□□□□□ -0.62
PABPC1-217ENST00000521067 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
PABPC1-217ENST00000521067 TRAV23DV6A0A075B6W5 121 aa11.19□□□□□ -0.62
PABPC1-217ENST00000521067 S100A7L2Q5SY68 101 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms