RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	C6orf226	Q5I0X4	101 aa		4.72	□□□□□ -1.65
PTK2-223	ENST00000520828		Q8IZM0	81 aa		4.72	□□□□□ -1.65
PTK2-223	ENST00000520828	IGLV7-46	A0A075B6I9	117 aa		4.71	□□□□□ -1.66
PTK2-223	ENST00000520828		A0A087X002	238 aa		4.71	□□□□□ -1.66
PTK2-223	ENST00000520828	TLX1NB	P0CAT3	122 aa		4.71	□□□□□ -1.66
PTK2-223	ENST00000520828	CRYGA	P11844	174 aa		4.71	□□□□□ -1.66
PTK2-223	ENST00000520828	PDZD11	Q5EBL8	140 aa		4.71	□□□□□ -1.66
PTK2-223	ENST00000520828	BAGE3	Q86Y29	109 aa		4.71	□□□□□ -1.66
PTK2-223	ENST00000520828	NDUFC2-KCTD14	E9PQ53	114 aa		4.7	□□□□□ -1.66
PTK2-223	ENST00000520828		H0Y8G0	127 aa		4.7	□□□□□ -1.66
PTK2-223	ENST00000520828	IGLC3	P0DOY3	106 aa		4.7	□□□□□ -1.66
PTK2-223	ENST00000520828	ZNF22	P17026	224 aa	Predicted RBP	4.7	□□□□□ -1.66
PTK2-223	ENST00000520828	C9orf129	Q5T035	196 aa	Known RBP	4.7	□□□□□ -1.66
PTK2-223	ENST00000520828	FAM19A2	Q8N3H0	131 aa		4.7	□□□□□ -1.66
PTK2-223	ENST00000520828	COX7B2	Q8TF08	81 aa		4.7	□□□□□ -1.66
PTK2-223	ENST00000520828		F8VRH5	84 aa		4.69	□□□□□ -1.66
PTK2-223	ENST00000520828		H3BRM9	83 aa		4.69	□□□□□ -1.66
PTK2-223	ENST00000520828	HSBP1	O75506	76 aa		4.69	□□□□□ -1.66
PTK2-223	ENST00000520828	ATP5L	O75964	103 aa		4.69	□□□□□ -1.66
PTK2-223	ENST00000520828	CXCL5	P42830	114 aa		4.69	□□□□□ -1.66
PTK2-223	ENST00000520828	KRTAP7-1	Q8IUC3	87 aa		4.69	□□□□□ -1.66
PTK2-223	ENST00000520828	XAGE1A	Q9HD64	81 aa		4.69	□□□□□ -1.66
PTK2-223	ENST00000520828	C11orf86	A6NJI1	115 aa		4.68	□□□□□ -1.66
PTK2-223	ENST00000520828	COLCA2	A8K830	154 aa		4.68	□□□□□ -1.66
PTK2-223	ENST00000520828	NUPR1	O60356	82 aa		4.68	□□□□□ -1.66
PTK2-223	ENST00000520828	TMEM170B	Q5T4T1	132 aa		4.68	□□□□□ -1.66
PTK2-223	ENST00000520828	CHCHD1	Q96BP2	118 aa	Known RBP	4.68	□□□□□ -1.66
PTK2-223	ENST00000520828	SERF1A	O75920	110 aa		4.67	□□□□□ -1.66
PTK2-223	ENST00000520828	FABP4	P15090	132 aa		4.67	□□□□□ -1.66
PTK2-223	ENST00000520828	LINC00304	Q8N9R0	145 aa		4.67	□□□□□ -1.66
PTK2-223	ENST00000520828	IFI27L1	Q96BM0	104 aa		4.67	□□□□□ -1.66
PTK2-223	ENST00000520828	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.67	□□□□□ -1.66
PTK2-223	ENST00000520828	IGLV5-39	A0A0G2JS06	123 aa		4.66	□□□□□ -1.66
PTK2-223	ENST00000520828	RPL28	P46779	137 aa	Known RBP	4.66	□□□□□ -1.66
PTK2-223	ENST00000520828	PPDPF	Q9H3Y8	114 aa		4.66	□□□□□ -1.66
PTK2-223	ENST00000520828	PFN2	P35080	140 aa		4.65	□□□□□ -1.67
PTK2-223	ENST00000520828	ASB16-AS1	Q495Z4	193 aa		4.65	□□□□□ -1.67
PTK2-223	ENST00000520828	LINC00337	Q8N6G1	96 aa		4.65	□□□□□ -1.67
PTK2-223	ENST00000520828	ZNF625	Q96I27	306 aa	Predicted RBP	4.65	□□□□□ -1.67
PTK2-223	ENST00000520828	TRAV12-1	A0A0B4J245	112 aa		4.64	□□□□□ -1.67
PTK2-223	ENST00000520828	LEPROTL1	O95214	131 aa		4.64	□□□□□ -1.67
PTK2-223	ENST00000520828	KRTAP13-2	Q52LG2	175 aa		4.64	□□□□□ -1.67
PTK2-223	ENST00000520828	LBH	Q53QV2	105 aa	Predicted RBP	4.64	□□□□□ -1.67
PTK2-223	ENST00000520828	ANAPC11	Q9NYG5	84 aa		4.64	□□□□□ -1.67
PTK2-223	ENST00000520828		A0A0U1RRA0	63 aa		4.63	□□□□□ -1.67
PTK2-223	ENST00000520828	TMEM223	A0PJW6	202 aa		4.63	□□□□□ -1.67
PTK2-223	ENST00000520828	BCE1	O60756	84 aa		4.63	□□□□□ -1.67
PTK2-223	ENST00000520828	CTAG1A	P78358	180 aa		4.63	□□□□□ -1.67
PTK2-223	ENST00000520828	FAM229B	Q4G0N7	80 aa		4.63	□□□□□ -1.67
PTK2-223	ENST00000520828	PMCHL2	Q9BQD1	86 aa		4.63	□□□□□ -1.67
PTK2-223	ENST00000520828	ERG28	Q9UKR5	140 aa		4.63	□□□□□ -1.67
PTK2-223	ENST00000520828	C22orf24	Q9Y442	160 aa		4.63	□□□□□ -1.67
PTK2-223	ENST00000520828	IGKV2D-26	A0A0A0MRZ7	120 aa		4.62	□□□□□ -1.67
PTK2-223	ENST00000520828	GAGE10	A6NGK3	116 aa		4.62	□□□□□ -1.67
PTK2-223	ENST00000520828	SEC61B	P60468	96 aa	Known RBP	4.62	□□□□□ -1.67
PTK2-223	ENST00000520828	MRPL55	Q7Z7F7	128 aa	Known RBP	4.62	□□□□□ -1.67
PTK2-223	ENST00000520828	HSPB8	Q9UJY1	196 aa		4.62	□□□□□ -1.67
PTK2-223	ENST00000520828	RPL37AP8	A6NKH3	93 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST1H2BK	O60814	126 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST1H2BJ	P06899	126 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	CFC1B	P0CG36	223 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST1H2BO	P23527	126 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST1H2BB	P33778	126 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	LINC00158	P58513	81 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST1H2BD	P58876	126 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST1H2BC	P62807	126 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST2H2BE	Q16778	126 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	NKAPP1	Q8N9T2	125 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST1H2BH	Q93079	126 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST1H2BN	Q99877	126 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	HIST1H2BM	Q99879	126 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	KRTAP4-1	Q9BYQ7	146 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	SND1-IT1	Q9HBX3	110 aa		4.61	□□□□□ -1.67
PTK2-223	ENST00000520828	TSPEAR-AS2	P59090	65 aa		4.6	□□□□□ -1.67
PTK2-223	ENST00000520828	FP248	Q71RG6	208 aa	Predicted RBP	4.6	□□□□□ -1.67
PTK2-223	ENST00000520828	MAP1LC3C	Q9BXW4	147 aa		4.6	□□□□□ -1.67
PTK2-223	ENST00000520828	TP73-AS1	Q9UF72	201 aa		4.6	□□□□□ -1.67
PTK2-223	ENST00000520828	IGLV5-37	A0A075B6J1	123 aa		4.59	□□□□□ -1.67
PTK2-223	ENST00000520828	ATP6V1G1	O75348	118 aa		4.59	□□□□□ -1.67
PTK2-223	ENST00000520828	VPREB1	P12018	145 aa		4.59	□□□□□ -1.67
PTK2-223	ENST00000520828	PLN	P26678	52 aa		4.59	□□□□□ -1.67
PTK2-223	ENST00000520828	MEIG1	Q5JSS6	88 aa		4.59	□□□□□ -1.67
PTK2-223	ENST00000520828	SFTA2	Q6UW10	78 aa		4.59	□□□□□ -1.67
PTK2-223	ENST00000520828		Q8NDZ9	215 aa		4.59	□□□□□ -1.67
PTK2-223	ENST00000520828	LINC00167	Q96N53	147 aa		4.59	□□□□□ -1.67
PTK2-223	ENST00000520828	IGKV2-28	A0A075B6P5	120 aa		4.58	□□□□□ -1.68
PTK2-223	ENST00000520828	DPM2	O94777	84 aa		4.58	□□□□□ -1.68
PTK2-223	ENST00000520828	IGKV2D-28	P01615	120 aa		4.58	□□□□□ -1.68
PTK2-223	ENST00000520828	IGKC	P01834	107 aa		4.58	□□□□□ -1.68
PTK2-223	ENST00000520828	SMIM13	P0DJ93	91 aa		4.58	□□□□□ -1.68
PTK2-223	ENST00000520828	UBE2A	P49459	152 aa		4.58	□□□□□ -1.68
PTK2-223	ENST00000520828	HERVK_113	P61574	105 aa		4.58	□□□□□ -1.68
PTK2-223	ENST00000520828	COX17	Q14061	63 aa		4.58	□□□□□ -1.68
PTK2-223	ENST00000520828	KRTAP13-3	Q3SY46	172 aa		4.58	□□□□□ -1.68
PTK2-223	ENST00000520828	NDUFA12	Q9UI09	145 aa		4.58	□□□□□ -1.68
PTK2-223	ENST00000520828	SPAG11A	Q6PDA7	123 aa		4.57	□□□□□ -1.68
PTK2-223	ENST00000520828	MYMX	A0A1B0GTQ4	84 aa		4.56	□□□□□ -1.68
PTK2-223	ENST00000520828	LEPROT	O15243	131 aa		4.56	□□□□□ -1.68
PTK2-223	ENST00000520828	LGALS3	P17931	250 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms