RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 URB1-AS1Q96HZ7 61 aa8.83□□□□□ -1
CSMD1-207ENST00000520451 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
CSMD1-207ENST00000520451 LINC00614P0C842 121 aa8.82□□□□□ -1
CSMD1-207ENST00000520451 C18orf32Q8TCD1 76 aa8.82□□□□□ -1
CSMD1-207ENST00000520451 C11orf86A6NJI1 115 aa8.81□□□□□ -1
CSMD1-207ENST00000520451 M0R378 163 aa8.81□□□□□ -1
CSMD1-207ENST00000520451 TMEM170BQ5T4T1 132 aa8.81□□□□□ -1
CSMD1-207ENST00000520451 Q8NDZ9 215 aa8.81□□□□□ -1
CSMD1-207ENST00000520451 TRAPPC1Q9Y5R8 145 aa8.81□□□□□ -1
CSMD1-207ENST00000520451 SFTA2Q6UW10 78 aa8.8□□□□□ -1
CSMD1-207ENST00000520451 BAGE3Q86Y29 109 aa8.8□□□□□ -1
CSMD1-207ENST00000520451 CBLN2Q8IUK8 224 aa8.78□□□□□ -1
CSMD1-207ENST00000520451 PLEKHB2Q96CS7 222 aa8.78□□□□□ -1
CSMD1-207ENST00000520451 LINC00158P58513 81 aa8.77□□□□□ -1.01
CSMD1-207ENST00000520451 YPEL4Q96NS1 127 aa8.77□□□□□ -1.01
CSMD1-207ENST00000520451 HIGD2AQ9BW72 106 aa8.77□□□□□ -1.01
CSMD1-207ENST00000520451 C3orf22Q8N5N4 141 aa8.76□□□□□ -1.01
CSMD1-207ENST00000520451 CHTOPQ9Y3Y2 248 aaKnown RBP8.76□□□□□ -1.01
CSMD1-207ENST00000520451 IGLV7-46A0A075B6I9 117 aa8.75□□□□□ -1.01
CSMD1-207ENST00000520451 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
CSMD1-207ENST00000520451 SVIPQ8NHG7 77 aa8.75□□□□□ -1.01
CSMD1-207ENST00000520451 CDIP1Q9H305 208 aa8.75□□□□□ -1.01
CSMD1-207ENST00000520451 TPRXLQ17RH7 258 aa8.74□□□□□ -1.01
CSMD1-207ENST00000520451 FAT4Q6V0I7 4981 aa8.73□□□□□ -1.01
CSMD1-207ENST00000520451 TMEM223A0PJW6 202 aa8.72□□□□□ -1.01
CSMD1-207ENST00000520451 COLCA2A8K830 154 aa8.72□□□□□ -1.01
CSMD1-207ENST00000520451 SPRR4Q96PI1 79 aa8.72□□□□□ -1.01
CSMD1-207ENST00000520451 TRAV12-1A0A0B4J245 112 aa8.7□□□□□ -1.02
CSMD1-207ENST00000520451 SMIM13P0DJ93 91 aa8.7□□□□□ -1.02
CSMD1-207ENST00000520451 BOD1L2Q8IYS8 172 aa8.7□□□□□ -1.02
CSMD1-207ENST00000520451 IFI27L1Q96BM0 104 aa8.7□□□□□ -1.02
CSMD1-207ENST00000520451 ZNF706Q9Y5V0 76 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-207ENST00000520451 MUC17Q685J3 4493 aa8.7□□□□□ -1.02
CSMD1-207ENST00000520451 PRYO14603 147 aa8.69□□□□□ -1.02
CSMD1-207ENST00000520451 NCR3O14931 201 aa8.69□□□□□ -1.02
CSMD1-207ENST00000520451 MEIG1Q5JSS6 88 aa8.69□□□□□ -1.02
CSMD1-207ENST00000520451 SPAG11AQ6PDA7 123 aa8.69□□□□□ -1.02
CSMD1-207ENST00000520451 PPDPFQ9H3Y8 114 aa8.69□□□□□ -1.02
CSMD1-207ENST00000520451 CHCHD1Q96BP2 118 aaKnown RBP8.68□□□□□ -1.02
CSMD1-207ENST00000520451 TMA7Q9Y2S6 64 aaKnown RBP8.68□□□□□ -1.02
CSMD1-207ENST00000520451 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
CSMD1-207ENST00000520451 LCE2AQ5TA79 106 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-207ENST00000520451 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
CSMD1-207ENST00000520451 HERV-K104P63124 156 aa8.66□□□□□ -1.02
CSMD1-207ENST00000520451 LINC00337Q8N6G1 96 aa8.66□□□□□ -1.02
CSMD1-207ENST00000520451 ETDCA0A1B0GVM5 59 aa8.65□□□□□ -1.02
CSMD1-207ENST00000520451 S100A6P06703 90 aa8.65□□□□□ -1.02
CSMD1-207ENST00000520451 SPRR1AP35321 89 aa8.65□□□□□ -1.02
CSMD1-207ENST00000520451 DAND5Q8N907 189 aa8.65□□□□□ -1.02
CSMD1-207ENST00000520451 Q8NBF4 154 aa8.65□□□□□ -1.02
CSMD1-207ENST00000520451 KRTAP9-2Q9BYQ4 174 aa8.65□□□□□ -1.02
CSMD1-207ENST00000520451 KCNQ1DNQ9H478 68 aa8.65□□□□□ -1.02
CSMD1-207ENST00000520451 NDUFA12Q9UI09 145 aa8.65□□□□□ -1.02
CSMD1-207ENST00000520451 FP248Q71RG6 208 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-207ENST00000520451 SMCR5Q8TEV8 140 aa8.64□□□□□ -1.03
CSMD1-207ENST00000520451 TRBV10-3A0A0K0K1G6 114 aa8.63□□□□□ -1.03
CSMD1-207ENST00000520451 TMEM238LA0A1B0GVL6 79 aa8.63□□□□□ -1.03
CSMD1-207ENST00000520451 LINC00587B1AMM8 73 aa8.63□□□□□ -1.03
CSMD1-207ENST00000520451 MYMXA0A1B0GTQ4 84 aa8.62□□□□□ -1.03
CSMD1-207ENST00000520451 KRTAP4-16G5E9R7 235 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-207ENST00000520451 H0Y8G0 127 aa8.62□□□□□ -1.03
CSMD1-207ENST00000520451 HSBP1O75506 76 aa8.62□□□□□ -1.03
CSMD1-207ENST00000520451 FAM19A2Q8N3H0 131 aa8.62□□□□□ -1.03
CSMD1-207ENST00000520451 MAP1LC3CQ9BXW4 147 aa8.62□□□□□ -1.03
CSMD1-207ENST00000520451 S100A12P80511 92 aa8.6□□□□□ -1.03
CSMD1-207ENST00000520451 TSPEAR-AS2P59090 65 aa8.59□□□□□ -1.03
CSMD1-207ENST00000520451 LINC00483Q53H64 154 aa8.59□□□□□ -1.03
CSMD1-207ENST00000520451 GAGE2AQ6NT46 116 aa8.59□□□□□ -1.03
CSMD1-207ENST00000520451 B5MCH6 92 aa8.58□□□□□ -1.04
CSMD1-207ENST00000520451 SPINK1P00995 79 aa8.58□□□□□ -1.04
CSMD1-207ENST00000520451 DDTP30046 118 aa8.57□□□□□ -1.04
CSMD1-207ENST00000520451 KRTAP13-3Q3SY46 172 aa8.57□□□□□ -1.04
CSMD1-207ENST00000520451 IGLV9-49A0A0B4J1Y8 123 aa8.56□□□□□ -1.04
CSMD1-207ENST00000520451 LEPROTO15243 131 aa8.56□□□□□ -1.04
CSMD1-207ENST00000520451 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
CSMD1-207ENST00000520451 TRGC2P03986 189 aa8.56□□□□□ -1.04
CSMD1-207ENST00000520451 MOBPQ13875 183 aa8.56□□□□□ -1.04
CSMD1-207ENST00000520451 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
CSMD1-207ENST00000520451 TRBV10-2A0A0K0K1G8 114 aa8.55□□□□□ -1.04
CSMD1-207ENST00000520451 LEPROTL1O95214 131 aa8.55□□□□□ -1.04
CSMD1-207ENST00000520451 PLNP26678 52 aa8.55□□□□□ -1.04
CSMD1-207ENST00000520451 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
CSMD1-207ENST00000520451 Q9BRP9 147 aa8.54□□□□□ -1.04
CSMD1-207ENST00000520451 MIEN1Q9BRT3 115 aa8.54□□□□□ -1.04
CSMD1-207ENST00000520451 SPANXB1Q9NS25 103 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-207ENST00000520451 J3QQQ9 107 aa8.53□□□□□ -1.04
CSMD1-207ENST00000520451 SERF1AO75920 110 aa8.53□□□□□ -1.04
CSMD1-207ENST00000520451 HERVK_113P61574 105 aa8.53□□□□□ -1.04
CSMD1-207ENST00000520451 Q6ZRX8 168 aa8.53□□□□□ -1.04
CSMD1-207ENST00000520451 DPM2O94777 84 aa8.52□□□□□ -1.05
CSMD1-207ENST00000520451 NMUP48645 174 aa8.52□□□□□ -1.05
CSMD1-207ENST00000520451 LINC00310P59036 64 aa8.52□□□□□ -1.05
CSMD1-207ENST00000520451 ASB16-AS1Q495Z4 193 aa8.52□□□□□ -1.05
CSMD1-207ENST00000520451 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.05
CSMD1-207ENST00000520451 HIST1H2BKO60814 126 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 HIST1H2BJP06899 126 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 LGALS3P17931 250 aaKnown RBP8.51□□□□□ -1.05
CSMD1-207ENST00000520451 HIST1H2BOP23527 126 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 HIST1H2BBP33778 126 aa8.51□□□□□ -1.05
CSMD1-207ENST00000520451 HIST1H2BDP58876 126 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms