RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 C9orf163Q8N9P6 203 aa9.19□□□□□ -0.94
VPS37A-206ENST00000520140 C6orf48Q9UBA6 75 aa9.19□□□□□ -0.94
VPS37A-206ENST00000520140 DYNC1H1Q14204 4646 aaKnown RBP9.19□□□□□ -0.94
VPS37A-206ENST00000520140 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
VPS37A-206ENST00000520140 J3QQQ9 107 aa9.17□□□□□ -0.94
VPS37A-206ENST00000520140 LEPROTO15243 131 aa9.17□□□□□ -0.94
VPS37A-206ENST00000520140 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
VPS37A-206ENST00000520140 LGALS3P17931 250 aaKnown RBP9.16□□□□□ -0.94
VPS37A-206ENST00000520140 CXCL5P42830 114 aa9.16□□□□□ -0.94
VPS37A-206ENST00000520140 NDUFA12Q9UI09 145 aa9.16□□□□□ -0.94
VPS37A-206ENST00000520140 IGKV2-24A0A0C4DH68 120 aa9.15□□□□□ -0.94
VPS37A-206ENST00000520140 TMEM238LA0A1B0GVL6 79 aa9.15□□□□□ -0.94
VPS37A-206ENST00000520140 A6NJY4 79 aa9.15□□□□□ -0.94
VPS37A-206ENST00000520140 SMCPP49901 116 aaPredicted RBP9.15□□□□□ -0.94
VPS37A-206ENST00000520140 RPL18AQ02543 176 aaKnown RBP9.15□□□□□ -0.94
VPS37A-206ENST00000520140 PLEKHB2Q96CS7 222 aa9.15□□□□□ -0.94
VPS37A-206ENST00000520140 CDIP1Q9H305 208 aa9.15□□□□□ -0.94
VPS37A-206ENST00000520140 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
VPS37A-206ENST00000520140 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
VPS37A-206ENST00000520140 PFN2P35080 140 aa9.14□□□□□ -0.95
VPS37A-206ENST00000520140 SDIM1Q6ZPB5 146 aa9.14□□□□□ -0.95
VPS37A-206ENST00000520140 TRBV30A0A0K0K1B3 111 aa9.14□□□□□ -0.95
VPS37A-206ENST00000520140 F8WDY8 70 aa9.13□□□□□ -0.95
VPS37A-206ENST00000520140 HAMPP81172 84 aa9.13□□□□□ -0.95
VPS37A-206ENST00000520140 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
VPS37A-206ENST00000520140 PANO1I0J062 215 aa9.13□□□□□ -0.95
VPS37A-206ENST00000520140 GAGE2EQ4V326 116 aa9.13□□□□□ -0.95
VPS37A-206ENST00000520140 FAM30AQ9NZY2 134 aa9.13□□□□□ -0.95
VPS37A-206ENST00000520140 GAGE2DQ9UEU5 116 aa9.13□□□□□ -0.95
VPS37A-206ENST00000520140 A0A096LNI7 61 aa9.12□□□□□ -0.95
VPS37A-206ENST00000520140 PSMB2P49721 201 aa9.12□□□□□ -0.95
VPS37A-206ENST00000520140 Q6ZRP5 223 aa9.12□□□□□ -0.95
VPS37A-206ENST00000520140 ZNF815PA8K554 130 aa9.11□□□□□ -0.95
VPS37A-206ENST00000520140 TSPAN13O95857 204 aa9.11□□□□□ -0.95
VPS37A-206ENST00000520140 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.11□□□□□ -0.95
VPS37A-206ENST00000520140 LOC107984156A0A0G2JMH3 177 aa9.11□□□□□ -0.95
VPS37A-206ENST00000520140 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
VPS37A-206ENST00000520140 LYRM7Q5U5X0 104 aa9.11□□□□□ -0.95
VPS37A-206ENST00000520140 ARL17AQ8IVW1 177 aa9.11□□□□□ -0.95
VPS37A-206ENST00000520140 PPDPFLQ8WWR9 84 aa9.11□□□□□ -0.95
VPS37A-206ENST00000520140 DPH3Q96FX2 82 aa9.11□□□□□ -0.95
VPS37A-206ENST00000520140 MT-ATP8P03928 68 aa9.1□□□□□ -0.95
VPS37A-206ENST00000520140 SRSF9Q13242 221 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS37A-206ENST00000520140 MEIG1Q5JSS6 88 aa9.1□□□□□ -0.95
VPS37A-206ENST00000520140 SCGB1D4Q6XE38 83 aa9.1□□□□□ -0.95
VPS37A-206ENST00000520140 ERG28Q9UKR5 140 aa9.1□□□□□ -0.95
VPS37A-206ENST00000520140 NDUFC2-KCTD14E9PQ53 114 aa9.1□□□□□ -0.95
VPS37A-206ENST00000520140 XGP55808 180 aa9.09□□□□□ -0.95
VPS37A-206ENST00000520140 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
VPS37A-206ENST00000520140 XAGE1AQ9HD64 81 aa9.09□□□□□ -0.95
VPS37A-206ENST00000520140 DNAH8Q96JB1 4490 aa9.08□□□□□ -0.96
VPS37A-206ENST00000520140 LINC00158P58513 81 aa9.08□□□□□ -0.96
VPS37A-206ENST00000520140 SFTA2Q6UW10 78 aa9.08□□□□□ -0.96
VPS37A-206ENST00000520140 DAND5Q8N907 189 aa9.08□□□□□ -0.96
VPS37A-206ENST00000520140 HERV-K104P63124 156 aa9.07□□□□□ -0.96
VPS37A-206ENST00000520140 APOBP04114 4563 aaKnown RBP9.07□□□□□ -0.96
VPS37A-206ENST00000520140 KIAA1109Q2LD37 5005 aa9.07□□□□□ -0.96
VPS37A-206ENST00000520140 TRBV20-1A0A075B6N2 111 aa9.07□□□□□ -0.96
VPS37A-206ENST00000520140 A0A0J9YXY3 114 aa9.07□□□□□ -0.96
VPS37A-206ENST00000520140 TCL1BO95988 128 aa9.06□□□□□ -0.96
VPS37A-206ENST00000520140 TLX1NBP0CAT3 122 aa9.06□□□□□ -0.96
VPS37A-206ENST00000520140 FAM168BA1KXE4 195 aa9.05□□□□□ -0.96
VPS37A-206ENST00000520140 SPACA4Q8TDM5 124 aa9.05□□□□□ -0.96
VPS37A-206ENST00000520140 C9orf129Q5T035 196 aaKnown RBP9.04□□□□□ -0.96
VPS37A-206ENST00000520140 Q6ZSA8 131 aa9.04□□□□□ -0.96
VPS37A-206ENST00000520140 NPC2P61916 151 aa9.04□□□□□ -0.96
VPS37A-206ENST00000520140 COX17Q14061 63 aa9.04□□□□□ -0.96
VPS37A-206ENST00000520140 SCXQ7RTU7 201 aa9.04□□□□□ -0.96
VPS37A-206ENST00000520140 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
VPS37A-206ENST00000520140 A0A087WYN8 130 aa9.03□□□□□ -0.96
VPS37A-206ENST00000520140 ADAMTSL4-AS1Q5T5F5 129 aa9.03□□□□□ -0.96
VPS37A-206ENST00000520140 CIRBP-AS1Q8TBR5 109 aa9.03□□□□□ -0.96
VPS37A-206ENST00000520140 SND1-IT1Q9HBX3 110 aa9.03□□□□□ -0.96
VPS37A-206ENST00000520140 PKIGQ9Y2B9 76 aa9.03□□□□□ -0.96
VPS37A-206ENST00000520140 CFC1BP0CG36 223 aa9.02□□□□□ -0.96
VPS37A-206ENST00000520140 CFC1P0CG37 223 aa9.02□□□□□ -0.96
VPS37A-206ENST00000520140 ANKRD29Q8N6D5 301 aa9.02□□□□□ -0.96
VPS37A-206ENST00000520140 A0A1W2PNN7 141 aa9.02□□□□□ -0.97
VPS37A-206ENST00000520140 FAM19A5Q7Z5A7 132 aaPredicted RBP9.02□□□□□ -0.97
VPS37A-206ENST00000520140 ANAPC13Q9BS18 74 aa9.02□□□□□ -0.97
VPS37A-206ENST00000520140 LINC00474Q9P2X8 69 aa9.02□□□□□ -0.97
VPS37A-206ENST00000520140 CIRBPQ14011 172 aaKnown RBP9.01□□□□□ -0.97
VPS37A-206ENST00000520140 BIRC6Q9NR09 4857 aa9.01□□□□□ -0.97
VPS37A-206ENST00000520140 SCGB1C2P0DMR2 95 aa9.01□□□□□ -0.97
VPS37A-206ENST00000520140 PRO1854Q9UHT4 67 aa9.01□□□□□ -0.97
VPS37A-206ENST00000520140 M0QXV9 152 aa9□□□□□ -0.97
VPS37A-206ENST00000520140 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
VPS37A-206ENST00000520140 LITAFQ99732 161 aa8.99□□□□□ -0.97
VPS37A-206ENST00000520140 EIF4EBP3O60516 100 aaPredicted RBP8.99□□□□□ -0.97
VPS37A-206ENST00000520140 RYR1P21817 5038 aa8.99□□□□□ -0.97
VPS37A-206ENST00000520140 SLC25A20O43772 301 aa8.98□□□□□ -0.97
VPS37A-206ENST00000520140 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
VPS37A-206ENST00000520140 KRTAP7-1Q8IUC3 87 aa8.98□□□□□ -0.97
VPS37A-206ENST00000520140 HSPG2P98160 4391 aa8.98□□□□□ -0.97
VPS37A-206ENST00000520140 Q8NDZ9 215 aa8.98□□□□□ -0.97
VPS37A-206ENST00000520140 C9JAW5 83 aa8.96□□□□□ -0.97
VPS37A-206ENST00000520140 PRR3P79522 188 aaKnown RBP8.96□□□□□ -0.98
VPS37A-206ENST00000520140 SOSTDC1Q6X4U4 206 aa8.96□□□□□ -0.98
VPS37A-206ENST00000520140 PLAC8Q9NZF1 115 aa8.96□□□□□ -0.98
VPS37A-206ENST00000520140 TIMM17BO60830 172 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms