RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 ZNF625Q96I27 306 aaPredicted RBP6.36□□□□□ -1.39
PVT1-208ENST00000519481 TMEM126AQ9H061 195 aa6.36□□□□□ -1.39
PVT1-208ENST00000519481 CTAG1AP78358 180 aa6.35□□□□□ -1.39
PVT1-208ENST00000519481 PRLHP81277 87 aa6.35□□□□□ -1.39
PVT1-208ENST00000519481 XP32Q5T750 250 aa6.35□□□□□ -1.39
PVT1-208ENST00000519481 COMMD7Q86VX2 200 aa6.35□□□□□ -1.39
PVT1-208ENST00000519481 BAGE3Q86Y29 109 aa6.35□□□□□ -1.39
PVT1-208ENST00000519481 TRAPPC1Q9Y5R8 145 aa6.35□□□□□ -1.39
PVT1-208ENST00000519481 TMEM238C9JI98 176 aa6.34□□□□□ -1.39
PVT1-208ENST00000519481 CBLN2Q8IUK8 224 aa6.34□□□□□ -1.39
PVT1-208ENST00000519481 C18orf32Q8TCD1 76 aa6.34□□□□□ -1.39
PVT1-208ENST00000519481 A0A096LNJ9 63 aa6.33□□□□□ -1.4
PVT1-208ENST00000519481 LINC00158P58513 81 aa6.33□□□□□ -1.4
PVT1-208ENST00000519481 RETNLBQ9BQ08 111 aa6.33□□□□□ -1.4
PVT1-208ENST00000519481 CDIP1Q9H305 208 aa6.33□□□□□ -1.4
PVT1-208ENST00000519481 C11orf86A6NJI1 115 aa6.32□□□□□ -1.4
PVT1-208ENST00000519481 M0R378 163 aa6.32□□□□□ -1.4
PVT1-208ENST00000519481 ATP6V1G1O75348 118 aa6.32□□□□□ -1.4
PVT1-208ENST00000519481 IFITM2Q01629 132 aa6.32□□□□□ -1.4
PVT1-208ENST00000519481 PMCHL1Q16048 86 aa6.32□□□□□ -1.4
PVT1-208ENST00000519481 HIGD2AQ9BW72 106 aa6.32□□□□□ -1.4
PVT1-208ENST00000519481 IGLV7-46A0A075B6I9 117 aa6.31□□□□□ -1.4
PVT1-208ENST00000519481 C10orf91Q5T1B1 145 aa6.31□□□□□ -1.4
PVT1-208ENST00000519481 PLEKHB2Q96CS7 222 aa6.31□□□□□ -1.4
PVT1-208ENST00000519481 URB1-AS1Q96HZ7 61 aa6.31□□□□□ -1.4
PVT1-208ENST00000519481 CHTOPQ9Y3Y2 248 aaKnown RBP6.31□□□□□ -1.4
PVT1-208ENST00000519481 SPAG11AQ6PDA7 123 aa6.3□□□□□ -1.4
PVT1-208ENST00000519481 ZNF706Q9Y5V0 76 aaPredicted RBP6.3□□□□□ -1.4
PVT1-208ENST00000519481 A0A0U1RRA0 63 aa6.29□□□□□ -1.4
PVT1-208ENST00000519481 MUC2Q02817 5179 aa6.29□□□□□ -1.4
PVT1-208ENST00000519481 NDUFA5Q16718 116 aa6.29□□□□□ -1.4
PVT1-208ENST00000519481 TPRXLQ17RH7 258 aa6.29□□□□□ -1.4
PVT1-208ENST00000519481 LINC00587B1AMM8 73 aa6.28□□□□□ -1.4
PVT1-208ENST00000519481 MEIG1Q5JSS6 88 aa6.28□□□□□ -1.4
PVT1-208ENST00000519481 C3orf22Q8N5N4 141 aa6.28□□□□□ -1.4
PVT1-208ENST00000519481 Q8NDZ9 215 aa6.28□□□□□ -1.4
PVT1-208ENST00000519481 TRAV12-1A0A0B4J245 112 aa6.27□□□□□ -1.41
PVT1-208ENST00000519481 TMEM223A0PJW6 202 aa6.27□□□□□ -1.41
PVT1-208ENST00000519481 PRYO14603 147 aa6.27□□□□□ -1.41
PVT1-208ENST00000519481 APOC3P02656 99 aa6.27□□□□□ -1.41
PVT1-208ENST00000519481 HERV-K104P63124 156 aa6.27□□□□□ -1.41
PVT1-208ENST00000519481 S100A12P80511 92 aa6.27□□□□□ -1.41
PVT1-208ENST00000519481 BOD1L2Q8IYS8 172 aa6.27□□□□□ -1.41
PVT1-208ENST00000519481 IFI27L1Q96BM0 104 aa6.27□□□□□ -1.41
PVT1-208ENST00000519481 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
PVT1-208ENST00000519481 ETDCA0A1B0GVM5 59 aa6.26□□□□□ -1.41
PVT1-208ENST00000519481 SNAPINO95295 136 aa6.26□□□□□ -1.41
PVT1-208ENST00000519481 SMIM13P0DJ93 91 aa6.26□□□□□ -1.41
PVT1-208ENST00000519481 CHCHD1Q96BP2 118 aaKnown RBP6.26□□□□□ -1.41
PVT1-208ENST00000519481 MAP1LC3CQ9BXW4 147 aa6.26□□□□□ -1.41
PVT1-208ENST00000519481 PPDPFQ9H3Y8 114 aa6.26□□□□□ -1.41
PVT1-208ENST00000519481 SVBPQ8N300 66 aa6.25□□□□□ -1.41
PVT1-208ENST00000519481 NCR3O14931 201 aa6.24□□□□□ -1.41
PVT1-208ENST00000519481 FP248Q71RG6 208 aaPredicted RBP6.24□□□□□ -1.41
PVT1-208ENST00000519481 MIR7-3HGQ8N6C7 128 aa6.24□□□□□ -1.41
PVT1-208ENST00000519481 LINC00337Q8N6G1 96 aa6.24□□□□□ -1.41
PVT1-208ENST00000519481 MYMXA0A1B0GTQ4 84 aa6.23□□□□□ -1.41
PVT1-208ENST00000519481 HSBP1O75506 76 aa6.23□□□□□ -1.41
PVT1-208ENST00000519481 SMCR5Q8TEV8 140 aa6.23□□□□□ -1.41
PVT1-208ENST00000519481 KCNQ1DNQ9H478 68 aa6.23□□□□□ -1.41
PVT1-208ENST00000519481 NDUFA12Q9UI09 145 aa6.23□□□□□ -1.41
PVT1-208ENST00000519481 SPRR1AP35321 89 aa6.21□□□□□ -1.42
PVT1-208ENST00000519481 Q8NBF4 154 aa6.21□□□□□ -1.42
PVT1-208ENST00000519481 TRBV10-3A0A0K0K1G6 114 aa6.2□□□□□ -1.42
PVT1-208ENST00000519481 H0Y8G0 127 aa6.2□□□□□ -1.42
PVT1-208ENST00000519481 SPINK1P00995 79 aa6.2□□□□□ -1.42
PVT1-208ENST00000519481 DAND5Q8N907 189 aa6.2□□□□□ -1.42
PVT1-208ENST00000519481 GAGE2AQ6NT46 116 aa6.19□□□□□ -1.42
PVT1-208ENST00000519481 FAM19A2Q8N3H0 131 aa6.19□□□□□ -1.42
PVT1-208ENST00000519481 MIEN1Q9BRT3 115 aa6.19□□□□□ -1.42
PVT1-208ENST00000519481 TRBV10-2A0A0K0K1G8 114 aa6.18□□□□□ -1.42
PVT1-208ENST00000519481 KRTAP4-16G5E9R7 235 aaPredicted RBP6.18□□□□□ -1.42
PVT1-208ENST00000519481 LEPROTO15243 131 aa6.18□□□□□ -1.42
PVT1-208ENST00000519481 DDTP30046 118 aa6.18□□□□□ -1.42
PVT1-208ENST00000519481 HERVK_113P61574 105 aa6.18□□□□□ -1.42
PVT1-208ENST00000519481 LINC00483Q53H64 154 aa6.18□□□□□ -1.42
PVT1-208ENST00000519481 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
PVT1-208ENST00000519481 B5MCH6 92 aa6.17□□□□□ -1.42
PVT1-208ENST00000519481 LEPROTL1O95214 131 aa6.17□□□□□ -1.42
PVT1-208ENST00000519481 PLNP26678 52 aa6.17□□□□□ -1.42
PVT1-208ENST00000519481 SSBP3-AS1Q7Z2R9 100 aa6.17□□□□□ -1.42
PVT1-208ENST00000519481 MUC17Q685J3 4493 aa6.16□□□□□ -1.42
PVT1-208ENST00000519481 IGLV9-49A0A0B4J1Y8 123 aa6.16□□□□□ -1.42
PVT1-208ENST00000519481 MOBPQ13875 183 aa6.16□□□□□ -1.42
PVT1-208ENST00000519481 S100A7L2Q5SY68 101 aa6.16□□□□□ -1.42
PVT1-208ENST00000519481 YPEL4Q96NS1 127 aa6.16□□□□□ -1.42
PVT1-208ENST00000519481 SPANXB1Q9NS25 103 aaPredicted RBP6.16□□□□□ -1.42
PVT1-208ENST00000519481 HSPB8Q9UJY1 196 aa6.16□□□□□ -1.42
PVT1-208ENST00000519481 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.42
PVT1-208ENST00000519481 LOC107984156A0A0G2JMH3 177 aa6.15□□□□□ -1.42
PVT1-208ENST00000519481 J3QQQ9 107 aa6.15□□□□□ -1.42
PVT1-208ENST00000519481 DPM2O94777 84 aa6.15□□□□□ -1.42
PVT1-208ENST00000519481 LGALS3P17931 250 aaKnown RBP6.15□□□□□ -1.42
PVT1-208ENST00000519481 NMUP48645 174 aa6.15□□□□□ -1.42
PVT1-208ENST00000519481 JOSD1Q15040 202 aaPredicted RBP6.15□□□□□ -1.42
PVT1-208ENST00000519481 KRTAP13-3Q3SY46 172 aa6.15□□□□□ -1.42
PVT1-208ENST00000519481 ARL17AQ8IVW1 177 aa6.15□□□□□ -1.42
PVT1-208ENST00000519481 TSPEAR-AS2P59090 65 aa6.14□□□□□ -1.43
PVT1-208ENST00000519481 SEC61BP60468 96 aaKnown RBP6.14□□□□□ -1.43
PVT1-208ENST00000519481 RPS29P62273 56 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms