RNA–Protein interactions for RNA: ENST00000518916.5

MSC-AS1-204, MSC antisense RNA 1, humanhuman

TSL 3 BASIC

Gene MSC-AS1, Length 864 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-204ENST00000518916 Q6ZRP5 223 aa9.54□□□□□ -0.88
MSC-AS1-204ENST00000518916 C9orf163Q8N9P6 203 aa9.54□□□□□ -0.88
MSC-AS1-204ENST00000518916 A4D1N5 150 aa9.53□□□□□ -0.88
MSC-AS1-204ENST00000518916 GAGE2BQ13066 116 aa9.53□□□□□ -0.88
MSC-AS1-204ENST00000518916 XAGE1AQ9HD64 81 aa9.53□□□□□ -0.88
MSC-AS1-204ENST00000518916 LOC107984156A0A0G2JMH3 177 aa9.52□□□□□ -0.89
MSC-AS1-204ENST00000518916 ARL17AQ8IVW1 177 aa9.52□□□□□ -0.89
MSC-AS1-204ENST00000518916 SNHG12Q9BXW3 62 aa9.52□□□□□ -0.89
MSC-AS1-204ENST00000518916 NHP2Q9NX24 153 aaKnown RBP9.52□□□□□ -0.89
MSC-AS1-204ENST00000518916 PKD1P98161 4303 aa9.52□□□□□ -0.89
MSC-AS1-204ENST00000518916 EIF4EBP3O60516 100 aaPredicted RBP9.51□□□□□ -0.89
MSC-AS1-204ENST00000518916 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
MSC-AS1-204ENST00000518916 RAB37Q96AX2 223 aa9.5□□□□□ -0.89
MSC-AS1-204ENST00000518916 NDUFC2O95298 119 aa9.49□□□□□ -0.89
MSC-AS1-204ENST00000518916 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
MSC-AS1-204ENST00000518916 PKHD1P08F94 4074 aa9.49□□□□□ -0.89
MSC-AS1-204ENST00000518916 DNAH11Q96DT5 4516 aa9.48□□□□□ -0.89
MSC-AS1-204ENST00000518916 A0A096LNI7 61 aa9.48□□□□□ -0.89
MSC-AS1-204ENST00000518916 A0A0B4J2C4 111 aa9.48□□□□□ -0.89
MSC-AS1-204ENST00000518916 IGKV2-24A0A0C4DH68 120 aa9.48□□□□□ -0.89
MSC-AS1-204ENST00000518916 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
MSC-AS1-204ENST00000518916 A0A1B0GVY2 172 aa9.47□□□□□ -0.89
MSC-AS1-204ENST00000518916 LINC01620Q4KN68 170 aa9.47□□□□□ -0.89
MSC-AS1-204ENST00000518916 COL5A1-AS1Q5SY13 56 aa9.47□□□□□ -0.89
MSC-AS1-204ENST00000518916 C9orf129Q5T035 196 aaKnown RBP9.47□□□□□ -0.89
MSC-AS1-204ENST00000518916 TRAV13-2A0A0B4J235 113 aa9.46□□□□□ -0.9
MSC-AS1-204ENST00000518916 A0A1B0GWB2 263 aa9.46□□□□□ -0.9
MSC-AS1-204ENST00000518916 K7ERJ3 54 aa9.46□□□□□ -0.9
MSC-AS1-204ENST00000518916 NCR3O14931 201 aa9.46□□□□□ -0.9
MSC-AS1-204ENST00000518916 CFC1BP0CG36 223 aa9.46□□□□□ -0.9
MSC-AS1-204ENST00000518916 CFC1P0CG37 223 aa9.46□□□□□ -0.9
MSC-AS1-204ENST00000518916 FUSP35637 526 aaKnown RBP eCLIP9.46□□□□□ -0.9
MSC-AS1-204ENST00000518916 SDIM1Q6ZPB5 146 aa9.46□□□□□ -0.9
MSC-AS1-204ENST00000518916 NKAPP1Q8N9T2 125 aa9.46□□□□□ -0.9
MSC-AS1-204ENST00000518916 HERC2O95714 4834 aa9.46□□□□□ -0.9
MSC-AS1-204ENST00000518916 DYNC1H1Q14204 4646 aaKnown RBP9.45□□□□□ -0.9
MSC-AS1-204ENST00000518916 TRBV10-2A0A0K0K1G8 114 aa9.44□□□□□ -0.9
MSC-AS1-204ENST00000518916 VPREB1P12018 145 aa9.44□□□□□ -0.9
MSC-AS1-204ENST00000518916 KRTAP10-2P60368 255 aa9.44□□□□□ -0.9
MSC-AS1-204ENST00000518916 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
MSC-AS1-204ENST00000518916 PLA2G2DQ9UNK4 145 aa9.44□□□□□ -0.9
MSC-AS1-204ENST00000518916 KIAA1109Q2LD37 5005 aa9.43□□□□□ -0.9
MSC-AS1-204ENST00000518916 IGKV2-28A0A075B6P5 120 aa9.43□□□□□ -0.9
MSC-AS1-204ENST00000518916 IGKV2D-28P01615 120 aa9.43□□□□□ -0.9
MSC-AS1-204ENST00000518916 CHTF8P0CG12 524 aa9.43□□□□□ -0.9
MSC-AS1-204ENST00000518916 RPL13AP40429 203 aaKnown RBP9.43□□□□□ -0.9
MSC-AS1-204ENST00000518916 S100A7L2Q5SY68 101 aa9.43□□□□□ -0.9
MSC-AS1-204ENST00000518916 FAM19A5Q7Z5A7 132 aaPredicted RBP9.43□□□□□ -0.9
MSC-AS1-204ENST00000518916 OR13C6PQ8NH95 151 aa9.43□□□□□ -0.9
MSC-AS1-204ENST00000518916 Q1RN00 199 aa9.42□□□□□ -0.9
MSC-AS1-204ENST00000518916 LBHQ53QV2 105 aaPredicted RBP9.42□□□□□ -0.9
MSC-AS1-204ENST00000518916 Q8NDZ9 215 aa9.42□□□□□ -0.9
MSC-AS1-204ENST00000518916 IGLV5-37A0A075B6J1 123 aa9.41□□□□□ -0.9
MSC-AS1-204ENST00000518916 M0R378 163 aa9.41□□□□□ -0.9
MSC-AS1-204ENST00000518916 SERTAD4-AS1Q5TG53 156 aa9.41□□□□□ -0.9
MSC-AS1-204ENST00000518916 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
MSC-AS1-204ENST00000518916 DPH3Q96FX2 82 aa9.41□□□□□ -0.9
MSC-AS1-204ENST00000518916 FAM168BA1KXE4 195 aa9.4□□□□□ -0.9
MSC-AS1-204ENST00000518916 H7C2G1 150 aa9.4□□□□□ -0.9
MSC-AS1-204ENST00000518916 PRR3P79522 188 aaKnown RBP9.4□□□□□ -0.9
MSC-AS1-204ENST00000518916 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.9
MSC-AS1-204ENST00000518916 TMEM126AQ9H061 195 aa9.39□□□□□ -0.91
MSC-AS1-204ENST00000518916 CBY1Q9Y3M2 126 aa9.39□□□□□ -0.91
MSC-AS1-204ENST00000518916 M0QXV9 152 aa9.38□□□□□ -0.91
MSC-AS1-204ENST00000518916 TSPAN13O95857 204 aa9.37□□□□□ -0.91
MSC-AS1-204ENST00000518916 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
MSC-AS1-204ENST00000518916 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
MSC-AS1-204ENST00000518916 GAGE10A6NGK3 116 aa9.36□□□□□ -0.91
MSC-AS1-204ENST00000518916 TAX1BP3O14907 124 aa9.36□□□□□ -0.91
MSC-AS1-204ENST00000518916 PSMB2P49721 201 aa9.36□□□□□ -0.91
MSC-AS1-204ENST00000518916 C22orf24Q9Y442 160 aa9.36□□□□□ -0.91
MSC-AS1-204ENST00000518916 TRBV10-3A0A0K0K1G6 114 aa9.35□□□□□ -0.91
MSC-AS1-204ENST00000518916 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
MSC-AS1-204ENST00000518916 C9orf118A6NHY6 69 aa9.35□□□□□ -0.91
MSC-AS1-204ENST00000518916 PANO1I0J062 215 aa9.35□□□□□ -0.91
MSC-AS1-204ENST00000518916 IGLV6-57P01721 117 aa9.35□□□□□ -0.91
MSC-AS1-204ENST00000518916 C7orf33Q8WU49 177 aa9.35□□□□□ -0.91
MSC-AS1-204ENST00000518916 LYRM7Q5U5X0 104 aa9.34□□□□□ -0.91
MSC-AS1-204ENST00000518916 LRP1BQ9NZR2 4599 aa9.33□□□□□ -0.92
MSC-AS1-204ENST00000518916 TRAV23DV6A0A075B6W5 121 aa9.33□□□□□ -0.92
MSC-AS1-204ENST00000518916 A0A087WYN8 130 aa9.33□□□□□ -0.92
MSC-AS1-204ENST00000518916 H3BUT2 72 aa9.33□□□□□ -0.92
MSC-AS1-204ENST00000518916 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
MSC-AS1-204ENST00000518916 RYR1P21817 5038 aa9.32□□□□□ -0.92
MSC-AS1-204ENST00000518916 COX6CP09669 75 aa9.32□□□□□ -0.92
MSC-AS1-204ENST00000518916 KRTAP10-1P60331 282 aa9.32□□□□□ -0.92
MSC-AS1-204ENST00000518916 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
MSC-AS1-204ENST00000518916 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
MSC-AS1-204ENST00000518916 NAA38Q9BRA0 125 aaKnown RBP9.32□□□□□ -0.92
MSC-AS1-204ENST00000518916 RPL28P46779 137 aaKnown RBP9.31□□□□□ -0.92
MSC-AS1-204ENST00000518916 UBE2BP63146 152 aa9.31□□□□□ -0.92
MSC-AS1-204ENST00000518916 PLAC8Q9NZF1 115 aa9.31□□□□□ -0.92
MSC-AS1-204ENST00000518916 RPL37AP8A6NKH3 93 aa9.3□□□□□ -0.92
MSC-AS1-204ENST00000518916 PRYO14603 147 aa9.3□□□□□ -0.92
MSC-AS1-204ENST00000518916 DIRC1Q969H9 104 aa9.3□□□□□ -0.92
MSC-AS1-204ENST00000518916 DNAH5Q8TE73 4624 aa9.29□□□□□ -0.92
MSC-AS1-204ENST00000518916 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
MSC-AS1-204ENST00000518916 TRIAP1O43715 76 aa9.29□□□□□ -0.92
MSC-AS1-204ENST00000518916 SCGB1C2P0DMR2 95 aa9.29□□□□□ -0.92
MSC-AS1-204ENST00000518916 FABP2P12104 132 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms