RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 ARHGAP35Q9NRY4 1499 aa0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 PKD1L3Q7Z443 1732 aa0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 ZFYVE26Q68DK2 2539 aa0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 A0A1B0GUT8 65 aa0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 CFDP00746 253 aaPredicted RBP0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 SPRR1BP22528 89 aa0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 S100A13Q99584 98 aa0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 CRIPTQ9P021 101 aa0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 PKD1L1Q8TDX9 2849 aa0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 SPTBN1Q01082 2364 aaKnown RBP0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 NKTRP30414 1462 aaKnown RBP0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 QSER1Q2KHR3 1735 aa0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 SUPT6HQ7KZ85 1726 aaKnown RBP0.16□□□□□ -2.38
RN7SKP88-201ENST00000516847 LRP1Q07954 4544 aaKnown RBP0.15□□□□□ -2.38
RN7SKP88-201ENST00000516847 TSC2P49815 1807 aa0.15□□□□□ -2.38
RN7SKP88-201ENST00000516847 CELSR1Q9NYQ6 3014 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 CEBPZOSA8MTT3 80 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 ADIRFQ15847 76 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 DEFB112Q30KQ8 113 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 DEFB109BQ30KR1 87 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 ST20Q9HBF5 79 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 UBR3Q6ZT12 1888 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 TMEM131LA2VDJ0 1609 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 FMN2Q9NZ56 1722 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 REV3LO60673 3130 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 IGSF10Q6WRI0 2623 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 CHD6Q8TD26 2715 aa0.15□□□□□ -2.39
RN7SKP88-201ENST00000516847 COL14A1Q05707 1796 aaKnown RBP0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 CLIP1P30622 1438 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 GVINP1Q7Z2Y8 2422 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 MAST4O15021 2626 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 SPTY2D1-AS1A0A0U1RR47 76 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 CPSF4LA6NMK7 179 aaKnown RBP0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 PHGR1C9JFL3 82 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 I3L3M4 83 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 SPINK4O60575 86 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 NDUFB1O75438 58 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 COX7BP24311 80 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 DEFB121Q5J5C9 76 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 ERVK-7P63135 1459 aa0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 HRNRQ86YZ3 2850 aaPredicted RBP0.14□□□□□ -2.39
RN7SKP88-201ENST00000516847 URB2Q14146 1524 aaKnown RBP0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 DCAF1Q9Y4B6 1507 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 SYNE1Q8NF91 8797 aaKnown RBP0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 FAT4Q6V0I7 4981 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 RGPD1P0DJD0 1748 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 NCOR2Q9Y618 2525 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 CCL22O00626 93 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 HMGA1P17096 107 aaKnown RBP0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 DEFB105AQ8NG35 78 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 MRPL34Q9BQ48 92 aaKnown RBP0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 BSNQ9UPA5 3926 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 DIP2BQ9P265 1576 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 RGPD8O14715 1765 aaPredicted RBP0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 RGPD5Q99666 1765 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 MUC5BQ9HC84 5762 aaPredicted RBP0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 ABCC1P33527 1531 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 LRRC7Q96NW7 1537 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 KDM5DQ9BY66 1539 aa0.13□□□□□ -2.39
RN7SKP88-201ENST00000516847 LTN1O94822 1766 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 RGPD2P0DJD1 1756 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 BCORQ6W2J9 1755 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 ATRQ13535 2644 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 CFAP74Q9C0B2 1584 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 CEP170BQ9Y4F5 1589 aaPredicted RBP0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 NCOR1O75376 2440 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 TRAV21A0A0B4J279 112 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 RPL38P63173 70 aaKnown RBP0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 BVES-AS1Q5T3Y7 98 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 ATP5EP2Q5VTU8 51 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 COX6B2Q6YFQ2 88 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 GAFA1Q96PS6 74 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 UBR5O95071 2799 aaPredicted RBP0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 TIAM2Q8IVF5 1701 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 PTPN23Q9H3S7 1636 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 WNK2Q9Y3S1 2297 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 MAP3K1Q13233 1512 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 MAGI3Q5TCQ9 1506 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 HUWE1Q7Z6Z7 4374 aaKnown RBP0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 RRBP1Q9P2E9 1410 aaKnown RBP0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 HIVEP3Q5T1R4 2406 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 KMT2AQ03164 3969 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 CSPG4Q6UVK1 2322 aa0.12□□□□□ -2.39
RN7SKP88-201ENST00000516847 CCDC88BA6NC98 1476 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 NCOA2Q15596 1464 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 FAT2Q9NYQ8 4349 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 POLR1AO95602 1720 aaPredicted RBP0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 ABCA2Q9BZC7 2435 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 H3BUT2 72 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 USP32Q8NFA0 1604 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 PRKDCP78527 4128 aaKnown RBP0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 PTPN13Q12923 2485 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 SCN11AQ9UI33 1791 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 ANKARQ7Z5J8 1434 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 PREX1Q8TCU6 1659 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 SPTA1P02549 2419 aa0.11□□□□□ -2.39
RN7SKP88-201ENST00000516847 CNOT1A5YKK6 2376 aaKnown RBP0.1□□□□□ -2.39
RN7SKP88-201ENST00000516847 PIK3C2BO00750 1634 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms