RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 J3QR89 54 aa1.4□□□□□ -2.19
HERC4-215ENST00000515753 M0R2Z0 102 aa1.4□□□□□ -2.19
HERC4-215ENST00000515753 CRPP02741 224 aa1.4□□□□□ -2.19
HERC4-215ENST00000515753 MT-ND4LP03901 98 aa1.4□□□□□ -2.19
HERC4-215ENST00000515753 DEFB130BP0DP73 79 aa1.4□□□□□ -2.19
HERC4-215ENST00000515753 DEFB130AP0DP74 79 aa1.4□□□□□ -2.19
HERC4-215ENST00000515753 C2orf82Q6UX34 121 aa1.4□□□□□ -2.19
HERC4-215ENST00000515753 DEFB104AQ8WTQ1 72 aa1.4□□□□□ -2.19
HERC4-215ENST00000515753 TMEM263Q8WUH6 116 aaKnown RBP1.4□□□□□ -2.19
HERC4-215ENST00000515753 TRGV2A0A075B6R0 118 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 IGKV2D-26A0A0A0MRZ7 120 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 CRYM-AS1A6NIL9 109 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 A8MTW9 85 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 ZNF727A8MUV8 499 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 NCR2O95944 276 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 TRACP01848 142 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 HBDP02042 147 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 GPX1P07203 203 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 NMBP08949 121 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 SLC25A6P12236 298 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 FAUP35544 74 aaKnown RBP1.39□□□□□ -2.19
HERC4-215ENST00000515753 CIRBPQ14011 172 aaKnown RBP1.39□□□□□ -2.19
HERC4-215ENST00000515753 ASB16-AS1Q495Z4 193 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 NMSQ5H8A3 153 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 FP248Q71RG6 208 aaPredicted RBP1.39□□□□□ -2.19
HERC4-215ENST00000515753 ZNF431Q8TF32 576 aaPredicted RBP1.39□□□□□ -2.19
HERC4-215ENST00000515753 ODF3Q96PU9 254 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 TRGV9Q99603 122 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 SMIM3Q9BZL3 60 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 FXYD6Q9H0Q3 95 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 NAA60Q9H7X0 242 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 PRO0255Q9UI72 69 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 SCP2D1Q9UJQ7 156 aa1.39□□□□□ -2.19
HERC4-215ENST00000515753 A0A087WTM6 91 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 A0A087WXM4 84 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 FAM25AB3EWG3 89 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 FAM25CB3EWG5 89 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 FAM25GB3EWG6 89 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 HYPMO75409 117 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 ERC2-IT1O76042 136 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 TCRAP04437 139 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 IL5P05113 134 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 SLC25A5P05141 298 aaKnown RBP1.38□□□□□ -2.19
HERC4-215ENST00000515753 AKAIN1P0CW23 69 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 HTN1P15515 57 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 AKR1D1P51857 326 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 CNBPP62633 177 aaKnown RBP1.38□□□□□ -2.19
HERC4-215ENST00000515753 SPCS2Q15005 226 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 SPINK13Q1W4C9 94 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 C1orf137Q5JT78 98 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 Q5VSD8 79 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 IZUMO2Q6UXV1 221 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 COA5Q86WW8 74 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 RAB37Q96AX2 223 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 VPS25Q9BRG1 176 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 GGACTQ9BVM4 153 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 SLC35B3Q9H1N7 401 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 NPVFQ9HCQ7 196 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 NIT2Q9NQR4 276 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 COMMD3Q9UBI1 195 aa1.38□□□□□ -2.19
HERC4-215ENST00000515753 ALMS1Q8TCU4 4167 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 CD3DP04234 171 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 NCS1P62166 190 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 NEDD8Q15843 81 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 SPINK9Q5DT21 86 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 GDF5OSQ5U4N7 250 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 LYPD5Q6UWN5 251 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 CYP2G1PQ6ZSU1 146 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 SNX29P2Q8IUI4 249 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 CLEC2BQ92478 149 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 NOP10Q9NPE3 64 aaKnown RBP1.37□□□□□ -2.19
HERC4-215ENST00000515753 MRPL36Q9P0J6 103 aaKnown RBP1.37□□□□□ -2.19
HERC4-215ENST00000515753 STARD9Q9P2P6 4700 aa1.37□□□□□ -2.19
HERC4-215ENST00000515753 TRAV12-2A0A075B6T6 113 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 A0A087WWC5 75 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 A0A096LPF7 62 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 TRGV1A0A0A0MS02 117 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 A0A0J9YY99 117 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 SPINK4O60575 86 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 PITX3O75364 302 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 IGLC6P0CF74 106 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 FAM74A1Q5RGS3 127 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 C10orf113Q5VZT2 155 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 KRTAP26-1Q6PEX3 210 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 Q6ZRN7 208 aaPredicted RBP1.36□□□□□ -2.19
HERC4-215ENST00000515753 TEN1Q86WV5 123 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 SMIM4Q8WVI0 70 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 ERG28Q9UKR5 140 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 LENEPQ9Y5L5 61 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 HYDINQ4G0P3 5121 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 PLECQ15149 4684 aaKnown RBP1.36□□□□□ -2.19
HERC4-215ENST00000515753 DNAH11Q96DT5 4516 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 SORL1Q92673 2214 aa1.36□□□□□ -2.19
HERC4-215ENST00000515753 PCLOQ9Y6V0 5065 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 TRAV12-3A0A0B4J271 114 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 TRBV6-5A0A0K0K1A5 114 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 RBAKDNA6NC62 111 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 NAP1L6A6NFF2 107 aa1.35□□□□□ -2.19
HERC4-215ENST00000515753 SFT2D2O95562 160 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms