RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 EFCAB10A6NFE3 127 aa-1.39□□□□□ -2.63
CXXC4-203ENST00000515509 S100A1P23297 94 aa-1.39□□□□□ -2.63
CXXC4-203ENST00000515509 ASIPP42127 132 aa-1.39□□□□□ -2.63
CXXC4-203ENST00000515509 GNGT1P63211 74 aa-1.39□□□□□ -2.63
CXXC4-203ENST00000515509 EIF4G3O43432 1585 aaKnown RBP-1.39□□□□□ -2.63
CXXC4-203ENST00000515509 SHPRHQ149N8 1683 aa-1.39□□□□□ -2.63
CXXC4-203ENST00000515509 ARMS2P0C7Q2 107 aa-1.4□□□□□ -2.63
CXXC4-203ENST00000515509 HEPN1Q6WQI6 88 aa-1.4□□□□□ -2.63
CXXC4-203ENST00000515509 CACFD1Q9UGQ2 172 aa-1.4□□□□□ -2.63
CXXC4-203ENST00000515509 ANKRD36A6QL64 1941 aa-1.4□□□□□ -2.63
CXXC4-203ENST00000515509 TRBV25-1A0A075B6N4 114 aa-1.41□□□□□ -2.64
CXXC4-203ENST00000515509 PSMG4Q5JS54 123 aa-1.41□□□□□ -2.64
CXXC4-203ENST00000515509 CDKN2A-AS1Q9UH64 79 aa-1.41□□□□□ -2.64
CXXC4-203ENST00000515509 CUX1P39880 1505 aa-1.41□□□□□ -2.64
CXXC4-203ENST00000515509 ABCC5O15440 1437 aa-1.41□□□□□ -2.64
CXXC4-203ENST00000515509 DNAH9Q9NYC9 4486 aa-1.42□□□□□ -2.64
CXXC4-203ENST00000515509 NBASA2RRP1 2371 aa-1.42□□□□□ -2.64
CXXC4-203ENST00000515509 HIVEP1P15822 2718 aa-1.42□□□□□ -2.64
CXXC4-203ENST00000515509 TRAV30A0A087WSZ9 112 aa-1.42□□□□□ -2.64
CXXC4-203ENST00000515509 WFDC13Q8IUB5 93 aa-1.42□□□□□ -2.64
CXXC4-203ENST00000515509 LYSTQ99698 3801 aa-1.42□□□□□ -2.64
CXXC4-203ENST00000515509 SPTY2D1-AS1A0A0U1RR47 76 aa-1.43□□□□□ -2.64
CXXC4-203ENST00000515509 H0YGG7 62 aa-1.43□□□□□ -2.64
CXXC4-203ENST00000515509 HIGD1BQ9P298 99 aa-1.43□□□□□ -2.64
CXXC4-203ENST00000515509 AKAP13Q12802 2813 aa-1.43□□□□□ -2.64
CXXC4-203ENST00000515509 EPG5Q9HCE0 2579 aa-1.43□□□□□ -2.64
CXXC4-203ENST00000515509 CLIP1P30622 1438 aa-1.43□□□□□ -2.64
CXXC4-203ENST00000515509 MUC17Q685J3 4493 aa-1.43□□□□□ -2.64
CXXC4-203ENST00000515509 PKHD1L1Q86WI1 4243 aa-1.43□□□□□ -2.64
CXXC4-203ENST00000515509 KIAA1109Q2LD37 5005 aa-1.44□□□□□ -2.64
CXXC4-203ENST00000515509 TRBV7-7A0A0K0K1E9 115 aa-1.44□□□□□ -2.64
CXXC4-203ENST00000515509 MT1AP04731 61 aa-1.44□□□□□ -2.64
CXXC4-203ENST00000515509 PMCHL1Q16048 86 aa-1.44□□□□□ -2.64
CXXC4-203ENST00000515509 GNG8Q9UK08 70 aa-1.44□□□□□ -2.64
CXXC4-203ENST00000515509 ABCA3Q99758 1704 aa-1.44□□□□□ -2.64
CXXC4-203ENST00000515509 MLH3Q9UHC1 1453 aa-1.44□□□□□ -2.64
CXXC4-203ENST00000515509 CICQ96RK0 1608 aaPredicted RBP-1.44□□□□□ -2.64
CXXC4-203ENST00000515509 REV3LO60673 3130 aa-1.44□□□□□ -2.64
CXXC4-203ENST00000515509 TACC2O95359 2948 aa-1.45□□□□□ -2.64
CXXC4-203ENST00000515509 MON2Q7Z3U7 1717 aa-1.45□□□□□ -2.64
CXXC4-203ENST00000515509 TROQ12816 1431 aaPredicted RBP-1.45□□□□□ -2.64
CXXC4-203ENST00000515509 NDUFC1O43677 76 aa-1.45□□□□□ -2.64
CXXC4-203ENST00000515509 C2orf88Q9BSF0 95 aa-1.45□□□□□ -2.64
CXXC4-203ENST00000515509 COL14A1Q05707 1796 aaKnown RBP-1.45□□□□□ -2.64
CXXC4-203ENST00000515509 SPG11Q96JI7 2443 aa-1.45□□□□□ -2.64
CXXC4-203ENST00000515509 SAMD9Q5K651 1589 aa-1.46□□□□□ -2.64
CXXC4-203ENST00000515509 H7BZZ5 65 aa-1.46□□□□□ -2.64
CXXC4-203ENST00000515509 GTF2H5Q6ZYL4 71 aa-1.46□□□□□ -2.64
CXXC4-203ENST00000515509 HYDINQ4G0P3 5121 aa-1.46□□□□□ -2.64
CXXC4-203ENST00000515509 RYR1P21817 5038 aa-1.46□□□□□ -2.64
CXXC4-203ENST00000515509 KNL1Q8NG31 2342 aa-1.46□□□□□ -2.64
CXXC4-203ENST00000515509 C5P01031 1676 aa-1.47□□□□□ -2.64
CXXC4-203ENST00000515509 MRPS10P82664 201 aaKnown RBP-1.47□□□□□ -2.64
CXXC4-203ENST00000515509 TMEM203Q969S6 136 aa-1.47□□□□□ -2.64
CXXC4-203ENST00000515509 TRGV9Q99603 122 aa-1.47□□□□□ -2.64
CXXC4-203ENST00000515509 VPS13DQ5THJ4 4388 aa-1.48□□□□□ -2.65
CXXC4-203ENST00000515509 AKAP9Q99996 3911 aa-1.48□□□□□ -2.65
CXXC4-203ENST00000515509 BCORQ6W2J9 1755 aa-1.48□□□□□ -2.65
CXXC4-203ENST00000515509 PRDM15P57071 1507 aaPredicted RBP-1.48□□□□□ -2.65
CXXC4-203ENST00000515509 DNAH3Q8TD57 4116 aa-1.48□□□□□ -2.65
CXXC4-203ENST00000515509 EPPK1P58107 5090 aaKnown RBP-1.49□□□□□ -2.65
CXXC4-203ENST00000515509 GNGT2O14610 69 aa-1.49□□□□□ -2.65
CXXC4-203ENST00000515509 TNRC18O15417 2968 aaPredicted RBP-1.49□□□□□ -2.65
CXXC4-203ENST00000515509 PRRC2CQ9Y520 2896 aaKnown RBP-1.49□□□□□ -2.65
CXXC4-203ENST00000515509 LINC00587B1AMM8 73 aa-1.5□□□□□ -2.65
CXXC4-203ENST00000515509 MPC2O95563 127 aa-1.5□□□□□ -2.65
CXXC4-203ENST00000515509 UQCRHP07919 91 aa-1.5□□□□□ -2.65
CXXC4-203ENST00000515509 CUBNO60494 3623 aa-1.5□□□□□ -2.65
CXXC4-203ENST00000515509 RAPGEF2Q9Y4G8 1499 aa-1.5□□□□□ -2.65
CXXC4-203ENST00000515509 ABCC2Q92887 1545 aa-1.5□□□□□ -2.65
CXXC4-203ENST00000515509 HTTP42858 3142 aa-1.51□□□□□ -2.65
CXXC4-203ENST00000515509 TEP1Q99973 2627 aaKnown RBP-1.51□□□□□ -2.65
CXXC4-203ENST00000515509 TRANK1O15050 2925 aa-1.51□□□□□ -2.65
CXXC4-203ENST00000515509 NRXN1Q9ULB1 1477 aa-1.51□□□□□ -2.65
CXXC4-203ENST00000515509 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.51□□□□□ -2.65
CXXC4-203ENST00000515509 ZFYVE16Q7Z3T8 1539 aa-1.52□□□□□ -2.65
CXXC4-203ENST00000515509 FAM135AQ9P2D6 1515 aa-1.52□□□□□ -2.65
CXXC4-203ENST00000515509 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.52□□□□□ -2.65
CXXC4-203ENST00000515509 PSENENQ9NZ42 101 aa-1.53□□□□□ -2.65
CXXC4-203ENST00000515509 AP4S1Q9Y587 144 aa-1.53□□□□□ -2.65
CXXC4-203ENST00000515509 KIF20BQ96Q89 1820 aa-1.54□□□□□ -2.66
CXXC4-203ENST00000515509 RGPD2P0DJD1 1756 aa-1.54□□□□□ -2.66
CXXC4-203ENST00000515509 USP9YO00507 2555 aaPredicted RBP-1.54□□□□□ -2.66
CXXC4-203ENST00000515509 IGLC2P0DOY2 106 aa-1.54□□□□□ -2.66
CXXC4-203ENST00000515509 IGLC3P0DOY3 106 aa-1.54□□□□□ -2.66
CXXC4-203ENST00000515509 ANKRD36BQ8N2N9 1353 aa-1.55□□□□□ -2.66
CXXC4-203ENST00000515509 HECTD1Q9ULT8 2610 aa-1.55□□□□□ -2.66
CXXC4-203ENST00000515509 H3BNG1 76 aa-1.55□□□□□ -2.66
CXXC4-203ENST00000515509 PMCHL2Q9BQD1 86 aa-1.55□□□□□ -2.66
CXXC4-203ENST00000515509 ITPR3Q14573 2671 aa-1.56□□□□□ -2.66
CXXC4-203ENST00000515509 C20orf202A1L168 122 aa-1.56□□□□□ -2.66
CXXC4-203ENST00000515509 HMGN3Q15651 99 aa-1.56□□□□□ -2.66
CXXC4-203ENST00000515509 NMSQ5H8A3 153 aa-1.56□□□□□ -2.66
CXXC4-203ENST00000515509 SERP2Q8N6R1 65 aa-1.56□□□□□ -2.66
CXXC4-203ENST00000515509 PREX1Q8TCU6 1659 aa-1.56□□□□□ -2.66
CXXC4-203ENST00000515509 MAGI2Q86UL8 1455 aa-1.56□□□□□ -2.66
CXXC4-203ENST00000515509 FASNP49327 2511 aaKnown RBP-1.57□□□□□ -2.66
CXXC4-203ENST00000515509 ATOX1O00244 68 aa-1.57□□□□□ -2.66
CXXC4-203ENST00000515509 MT-ATP8P03928 68 aa-1.57□□□□□ -2.66
CXXC4-203ENST00000515509 ALKAL2Q6UX46 152 aa-1.57□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms