RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
SMAD1-215ENST00000515385 TLN1Q9Y490 2541 aaKnown RBP8.61□□□□□ -1.03
SMAD1-215ENST00000515385 LAMA5O15230 3695 aa8.6□□□□□ -1.03
SMAD1-215ENST00000515385 Q8N9L7 120 aa8.6□□□□□ -1.03
SMAD1-215ENST00000515385 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
SMAD1-215ENST00000515385 EPG5Q9HCE0 2579 aa8.59□□□□□ -1.03
SMAD1-215ENST00000515385 ZFHX3Q15911 3703 aa8.59□□□□□ -1.03
SMAD1-215ENST00000515385 M0R378 163 aa8.58□□□□□ -1.04
SMAD1-215ENST00000515385 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
SMAD1-215ENST00000515385 C10orf25Q5T742 122 aa8.58□□□□□ -1.04
SMAD1-215ENST00000515385 C1orf64Q8NEQ6 169 aa8.58□□□□□ -1.04
SMAD1-215ENST00000515385 CYSRT1A8MQ03 144 aa8.58□□□□□ -1.04
SMAD1-215ENST00000515385 CYP4F30PQ9H0H9 118 aa8.58□□□□□ -1.04
SMAD1-215ENST00000515385 CHD8Q9HCK8 2581 aa8.57□□□□□ -1.04
SMAD1-215ENST00000515385 DEFB130BP0DP73 79 aa8.57□□□□□ -1.04
SMAD1-215ENST00000515385 DEFB130AP0DP74 79 aa8.57□□□□□ -1.04
SMAD1-215ENST00000515385 PHF5AQ7RTV0 110 aaKnown RBP8.57□□□□□ -1.04
SMAD1-215ENST00000515385 ZCCHC13Q8WW36 166 aaKnown RBP8.57□□□□□ -1.04
SMAD1-215ENST00000515385 CREBBPQ92793 2442 aa8.56□□□□□ -1.04
SMAD1-215ENST00000515385 IGLV10-54A0A075B6I4 117 aa8.56□□□□□ -1.04
SMAD1-215ENST00000515385 AKAP6Q13023 2319 aa8.56□□□□□ -1.04
SMAD1-215ENST00000515385 TRAV22A0A0B4J277 110 aa8.55□□□□□ -1.04
SMAD1-215ENST00000515385 APOC4P55056 127 aa8.55□□□□□ -1.04
SMAD1-215ENST00000515385 LINC00528Q8N1L1 170 aa8.55□□□□□ -1.04
SMAD1-215ENST00000515385 RELNP78509 3460 aa8.55□□□□□ -1.04
SMAD1-215ENST00000515385 ASH1LQ9NR48 2969 aaKnown RBP8.55□□□□□ -1.04
SMAD1-215ENST00000515385 SMIM29Q86T20 159 aa8.54□□□□□ -1.04
SMAD1-215ENST00000515385 C19orf73Q9NVV2 129 aa8.54□□□□□ -1.04
SMAD1-215ENST00000515385 FAM30AQ9NZY2 134 aa8.54□□□□□ -1.04
SMAD1-215ENST00000515385 SYCNQ0VAF6 134 aa8.53□□□□□ -1.04
SMAD1-215ENST00000515385 SPTA1P02549 2419 aa8.53□□□□□ -1.04
SMAD1-215ENST00000515385 ETDCA0A1B0GVM5 59 aa8.53□□□□□ -1.04
SMAD1-215ENST00000515385 NDUFB1O75438 58 aa8.52□□□□□ -1.05
SMAD1-215ENST00000515385 C11orf45Q8TAV5 145 aa8.52□□□□□ -1.05
SMAD1-215ENST00000515385 VPREB1P12018 145 aa8.51□□□□□ -1.05
SMAD1-215ENST00000515385 KLK12Q9UKR0 248 aa8.51□□□□□ -1.05
SMAD1-215ENST00000515385 KMT2BQ9UMN6 2715 aaPredicted RBP8.51□□□□□ -1.05
SMAD1-215ENST00000515385 CEP295Q9C0D2 2601 aa8.51□□□□□ -1.05
SMAD1-215ENST00000515385 IGLV5-48A0A075B6I7 105 aa8.5□□□□□ -1.05
SMAD1-215ENST00000515385 UBE2AP49459 152 aa8.5□□□□□ -1.05
SMAD1-215ENST00000515385 ATP11AUNQ6ZP68 121 aa8.5□□□□□ -1.05
SMAD1-215ENST00000515385 C6orf48Q9UBA6 75 aa8.5□□□□□ -1.05
SMAD1-215ENST00000515385 A0A096LPF7 62 aa8.5□□□□□ -1.05
SMAD1-215ENST00000515385 C3orf84H3BNL1 204 aa8.5□□□□□ -1.05
SMAD1-215ENST00000515385 WFDC10AQ9H1F0 79 aa8.5□□□□□ -1.05
SMAD1-215ENST00000515385 USP24Q9UPU5 2620 aa8.49□□□□□ -1.05
SMAD1-215ENST00000515385 LRCOL1A6NCL2 159 aa8.49□□□□□ -1.05
SMAD1-215ENST00000515385 PSPHP1O15172 72 aa8.49□□□□□ -1.05
SMAD1-215ENST00000515385 PSCAO43653 123 aa8.49□□□□□ -1.05
SMAD1-215ENST00000515385 IGLV1-51P01701 117 aa8.49□□□□□ -1.05
SMAD1-215ENST00000515385 XAGE1AQ9HD64 81 aa8.49□□□□□ -1.05
SMAD1-215ENST00000515385 PRB1P04280 392 aa8.49□□□□□ -1.05
SMAD1-215ENST00000515385 CELSR1Q9NYQ6 3014 aa8.48□□□□□ -1.05
SMAD1-215ENST00000515385 KPRPQ5T749 579 aaPredicted RBP8.48□□□□□ -1.05
SMAD1-215ENST00000515385 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
SMAD1-215ENST00000515385 C2CD3Q4AC94 2353 aa8.47□□□□□ -1.05
SMAD1-215ENST00000515385 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.46□□□□□ -1.05
SMAD1-215ENST00000515385 IGF2RP11717 2491 aa8.46□□□□□ -1.05
SMAD1-215ENST00000515385 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.05
SMAD1-215ENST00000515385 FAM208BQ5VWN6 2430 aa8.45□□□□□ -1.06
SMAD1-215ENST00000515385 A6NN06 94 aa8.44□□□□□ -1.06
SMAD1-215ENST00000515385 C8orf87E5RJ46 101 aa8.44□□□□□ -1.06
SMAD1-215ENST00000515385 LELP1Q5T871 98 aa8.44□□□□□ -1.06
SMAD1-215ENST00000515385 Q5VV11 94 aa8.44□□□□□ -1.06
SMAD1-215ENST00000515385 CSPG4Q6UVK1 2322 aa8.44□□□□□ -1.06
SMAD1-215ENST00000515385 A8MUN3 132 aa8.43□□□□□ -1.06
SMAD1-215ENST00000515385 Q8N377 158 aa8.43□□□□□ -1.06
SMAD1-215ENST00000515385 MAPK1IP1LQ8NDC0 245 aa8.43□□□□□ -1.06
SMAD1-215ENST00000515385 LIMD2Q9BT23 127 aa8.43□□□□□ -1.06
SMAD1-215ENST00000515385 CHD6Q8TD26 2715 aa8.43□□□□□ -1.06
SMAD1-215ENST00000515385 HIVEP3Q5T1R4 2406 aa8.43□□□□□ -1.06
SMAD1-215ENST00000515385 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
SMAD1-215ENST00000515385 X6R8D5 127 aa8.42□□□□□ -1.06
SMAD1-215ENST00000515385 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
SMAD1-215ENST00000515385 LCA10Q71F78 164 aa8.42□□□□□ -1.06
SMAD1-215ENST00000515385 Q8NBF4 154 aa8.41□□□□□ -1.06
SMAD1-215ENST00000515385 CAMK2N2Q96S95 79 aa8.41□□□□□ -1.06
SMAD1-215ENST00000515385 NBASA2RRP1 2371 aa8.41□□□□□ -1.06
SMAD1-215ENST00000515385 WNK1Q9H4A3 2382 aa8.41□□□□□ -1.06
SMAD1-215ENST00000515385 CR1P17927 2039 aa8.41□□□□□ -1.06
SMAD1-215ENST00000515385 A0A1W2PNM2 257 aa8.41□□□□□ -1.06
SMAD1-215ENST00000515385 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
SMAD1-215ENST00000515385 DHRS4-AS1Q9P1J3 65 aa8.41□□□□□ -1.06
SMAD1-215ENST00000515385 HCG22E2RYF7 251 aa8.4□□□□□ -1.06
SMAD1-215ENST00000515385 MP68P56378 58 aa8.4□□□□□ -1.06
SMAD1-215ENST00000515385 DSCR10P59022 87 aa8.4□□□□□ -1.06
SMAD1-215ENST00000515385 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.06
SMAD1-215ENST00000515385 KCNQ1DNQ9H478 68 aa8.4□□□□□ -1.06
SMAD1-215ENST00000515385 B9D2Q9BPU9 175 aa8.39□□□□□ -1.07
SMAD1-215ENST00000515385 PKD1L2Q7Z442 2459 aa8.39□□□□□ -1.07
SMAD1-215ENST00000515385 H3BS24 57 aa8.39□□□□□ -1.07
SMAD1-215ENST00000515385 C1orf137Q5JT78 98 aa8.39□□□□□ -1.07
SMAD1-215ENST00000515385 TNP2Q05952 138 aa8.38□□□□□ -1.07
SMAD1-215ENST00000515385 DEFB105AQ8NG35 78 aa8.38□□□□□ -1.07
SMAD1-215ENST00000515385 NOTCH3Q9UM47 2321 aa8.38□□□□□ -1.07
SMAD1-215ENST00000515385 H3BPC8 53 aa8.38□□□□□ -1.07
SMAD1-215ENST00000515385 ZFYVE26Q68DK2 2539 aa8.37□□□□□ -1.07
SMAD1-215ENST00000515385 ST20-AS1Q8NBB2 130 aa8.37□□□□□ -1.07
SMAD1-215ENST00000515385 Q9BRP9 147 aa8.37□□□□□ -1.07
SMAD1-215ENST00000515385 K7EQZ3 153 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms