RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 Q8NBF4 154 aa12.88□□□□□ -0.35
SMAD1-214ENST00000514831 KRTAP4-1Q9BYQ7 146 aa12.88□□□□□ -0.35
SMAD1-214ENST00000514831 ZNF625Q96I27 306 aaPredicted RBP12.87□□□□□ -0.35
SMAD1-214ENST00000514831 SFTA2Q6UW10 78 aa12.86□□□□□ -0.35
SMAD1-214ENST00000514831 SEC61BP60468 96 aaKnown RBP12.85□□□□□ -0.35
SMAD1-214ENST00000514831 FA2HQ7L5A8 372 aa12.85□□□□□ -0.35
SMAD1-214ENST00000514831 DAND5Q8N907 189 aa12.85□□□□□ -0.35
SMAD1-214ENST00000514831 SMCO4Q9NRQ5 59 aa12.85□□□□□ -0.35
SMAD1-214ENST00000514831 SPINK1P00995 79 aa12.84□□□□□ -0.35
SMAD1-214ENST00000514831 CRCT1Q9UGL9 99 aa12.81□□□□□ -0.36
SMAD1-214ENST00000514831 PRYO14603 147 aa12.8□□□□□ -0.36
SMAD1-214ENST00000514831 NDUFA6P56556 154 aa12.8□□□□□ -0.36
SMAD1-214ENST00000514831 A0A096LNJ9 63 aa12.79□□□□□ -0.36
SMAD1-214ENST00000514831 SPRR1AP35321 89 aa12.77□□□□□ -0.37
SMAD1-214ENST00000514831 NDUFA12Q9UI09 145 aa12.77□□□□□ -0.37
SMAD1-214ENST00000514831 C11orf86A6NJI1 115 aa12.76□□□□□ -0.37
SMAD1-214ENST00000514831 LINC00158P58513 81 aa12.76□□□□□ -0.37
SMAD1-214ENST00000514831 RPS29P62273 56 aaKnown RBP12.76□□□□□ -0.37
SMAD1-214ENST00000514831 LINC00483Q53H64 154 aa12.76□□□□□ -0.37
SMAD1-214ENST00000514831 COX19Q49B96 90 aa12.75□□□□□ -0.37
SMAD1-214ENST00000514831 TMEM170BQ5T4T1 132 aa12.75□□□□□ -0.37
SMAD1-214ENST00000514831 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
SMAD1-214ENST00000514831 SMCR5Q8TEV8 140 aa12.75□□□□□ -0.37
SMAD1-214ENST00000514831 KRTAP4-16G5E9R7 235 aaPredicted RBP12.74□□□□□ -0.37
SMAD1-214ENST00000514831 S100PP25815 95 aa12.74□□□□□ -0.37
SMAD1-214ENST00000514831 KCNQ1DNQ9H478 68 aa12.74□□□□□ -0.37
SMAD1-214ENST00000514831 Q8N377 158 aa12.73□□□□□ -0.37
SMAD1-214ENST00000514831 FSIP2Q5CZC0 6907 aa12.73□□□□□ -0.37
SMAD1-214ENST00000514831 A0A0U1RRA0 63 aa12.71□□□□□ -0.37
SMAD1-214ENST00000514831 HBDP02042 147 aa12.71□□□□□ -0.37
SMAD1-214ENST00000514831 FABP9Q0Z7S8 132 aa12.71□□□□□ -0.37
SMAD1-214ENST00000514831 XP32Q5T750 250 aa12.71□□□□□ -0.37
SMAD1-214ENST00000514831 ETDCA0A1B0GVM5 59 aa12.7□□□□□ -0.38
SMAD1-214ENST00000514831 BAGE3Q86Y29 109 aa12.7□□□□□ -0.38
SMAD1-214ENST00000514831 BOD1L2Q8IYS8 172 aa12.7□□□□□ -0.38
SMAD1-214ENST00000514831 URB1-AS1Q96HZ7 61 aa12.7□□□□□ -0.38
SMAD1-214ENST00000514831 NCR3O14931 201 aa12.69□□□□□ -0.38
SMAD1-214ENST00000514831 MOBPQ13875 183 aa12.69□□□□□ -0.38
SMAD1-214ENST00000514831 LINC00614P0C842 121 aa12.67□□□□□ -0.38
SMAD1-214ENST00000514831 LCE2CQ5TA81 110 aa12.67□□□□□ -0.38
SMAD1-214ENST00000514831 GAGE2AQ6NT46 116 aa12.67□□□□□ -0.38
SMAD1-214ENST00000514831 SLC25A20O43772 301 aa12.66□□□□□ -0.38
SMAD1-214ENST00000514831 SMIM13P0DJ93 91 aa12.66□□□□□ -0.38
SMAD1-214ENST00000514831 PMCHL1Q16048 86 aa12.66□□□□□ -0.38
SMAD1-214ENST00000514831 SSBP3-AS1Q7Z2R9 100 aa12.66□□□□□ -0.38
SMAD1-214ENST00000514831 C18orf32Q8TCD1 76 aa12.66□□□□□ -0.38
SMAD1-214ENST00000514831 IGLV9-49A0A0B4J1Y8 123 aa12.65□□□□□ -0.38
SMAD1-214ENST00000514831 TMEM218A2RU14 115 aa12.65□□□□□ -0.38
SMAD1-214ENST00000514831 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
SMAD1-214ENST00000514831 UQCC3Q6UW78 93 aa12.65□□□□□ -0.38
SMAD1-214ENST00000514831 TRBV10-3A0A0K0K1G6 114 aa12.64□□□□□ -0.39
SMAD1-214ENST00000514831 TMEM223A0PJW6 202 aa12.64□□□□□ -0.39
SMAD1-214ENST00000514831 ATP6V1G1O75348 118 aa12.64□□□□□ -0.39
SMAD1-214ENST00000514831 MIR7-3HGQ8N6C7 128 aa12.64□□□□□ -0.39
SMAD1-214ENST00000514831 SEC11CQ9BY50 192 aa12.64□□□□□ -0.39
SMAD1-214ENST00000514831 CHTOPQ9Y3Y2 248 aaKnown RBP12.63□□□□□ -0.39
SMAD1-214ENST00000514831 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
SMAD1-214ENST00000514831 B5MCH6 92 aa12.61□□□□□ -0.39
SMAD1-214ENST00000514831 ERC2-IT1O76042 136 aa12.61□□□□□ -0.39
SMAD1-214ENST00000514831 S100A12P80511 92 aa12.6□□□□□ -0.39
SMAD1-214ENST00000514831 KRTAP19-2Q3LHN2 52 aa12.6□□□□□ -0.39
SMAD1-214ENST00000514831 HERV-K104P63124 156 aa12.59□□□□□ -0.39
SMAD1-214ENST00000514831 Q9BRP9 147 aa12.57□□□□□ -0.4
SMAD1-214ENST00000514831 LINC00587B1AMM8 73 aa12.56□□□□□ -0.4
SMAD1-214ENST00000514831 MT1HP80294 61 aa12.56□□□□□ -0.4
SMAD1-214ENST00000514831 TRAV12-1A0A0B4J245 112 aa12.55□□□□□ -0.4
SMAD1-214ENST00000514831 Q6ZRX8 168 aa12.55□□□□□ -0.4
SMAD1-214ENST00000514831 TRAPPC1Q9Y5R8 145 aa12.55□□□□□ -0.4
SMAD1-214ENST00000514831 CFC1BP0CG36 223 aa12.53□□□□□ -0.4
SMAD1-214ENST00000514831 MAP1LC3CQ9BXW4 147 aa12.53□□□□□ -0.4
SMAD1-214ENST00000514831 DDTP30046 118 aa12.52□□□□□ -0.41
SMAD1-214ENST00000514831 RHEBQ15382 184 aa12.52□□□□□ -0.41
SMAD1-214ENST00000514831 TRBV10-2A0A0K0K1G8 114 aa12.51□□□□□ -0.41
SMAD1-214ENST00000514831 C9orf153Q5TBE3 101 aa12.51□□□□□ -0.41
SMAD1-214ENST00000514831 LOC107984156A0A0G2JMH3 177 aa12.5□□□□□ -0.41
SMAD1-214ENST00000514831 ARL17AQ8IVW1 177 aa12.5□□□□□ -0.41
SMAD1-214ENST00000514831 IFI27L1Q96BM0 104 aa12.5□□□□□ -0.41
SMAD1-214ENST00000514831 RPS10P5Q9NQ39 176 aa12.5□□□□□ -0.41
SMAD1-214ENST00000514831 MYMXA0A1B0GTQ4 84 aa12.49□□□□□ -0.41
SMAD1-214ENST00000514831 PCOTHQ58A44 107 aa12.46□□□□□ -0.41
SMAD1-214ENST00000514831 C10orf91Q5T1B1 145 aa12.46□□□□□ -0.41
SMAD1-214ENST00000514831 SPANXB1Q9NS25 103 aaPredicted RBP12.46□□□□□ -0.41
SMAD1-214ENST00000514831 IGLV8-61A0A075B6I0 122 aa12.44□□□□□ -0.42
SMAD1-214ENST00000514831 JOSD1Q15040 202 aaPredicted RBP12.44□□□□□ -0.42
SMAD1-214ENST00000514831 IGLV6-57P01721 117 aa12.43□□□□□ -0.42
SMAD1-214ENST00000514831 LORP23490 312 aaPredicted RBP12.43□□□□□ -0.42
SMAD1-214ENST00000514831 CHCHD1Q96BP2 118 aaKnown RBP12.43□□□□□ -0.42
SMAD1-214ENST00000514831 TSPEAR-AS2P59090 65 aa12.42□□□□□ -0.42
SMAD1-214ENST00000514831 TRAV23DV6A0A075B6W5 121 aa12.4□□□□□ -0.42
SMAD1-214ENST00000514831 S100A7L2Q5SY68 101 aa12.4□□□□□ -0.42
SMAD1-214ENST00000514831 LIMD2Q9BT23 127 aa12.4□□□□□ -0.42
SMAD1-214ENST00000514831 NDUFC2O95298 119 aa12.39□□□□□ -0.43
SMAD1-214ENST00000514831 KRTAP10-6P60371 365 aaPredicted RBP12.39□□□□□ -0.43
SMAD1-214ENST00000514831 COMMD7Q86VX2 200 aa12.39□□□□□ -0.43
SMAD1-214ENST00000514831 MIEN1Q9BRT3 115 aa12.39□□□□□ -0.43
SMAD1-214ENST00000514831 C5orf52A6NGY3 159 aa12.38□□□□□ -0.43
SMAD1-214ENST00000514831 ST20-AS1Q8NBB2 130 aa12.38□□□□□ -0.43
SMAD1-214ENST00000514831 LEPROTO15243 131 aa12.37□□□□□ -0.43
SMAD1-214ENST00000514831 IFITM2Q01629 132 aa12.37□□□□□ -0.43
SMAD1-214ENST00000514831 C9orf92A6NGG3 77 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms