RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 C6orf48Q9UBA6 75 aa5.55□□□□□ -1.52
RNF4-220ENST00000513578 H7C2G1 150 aa5.54□□□□□ -1.52
RNF4-220ENST00000513578 CAMK2N2Q96S95 79 aa5.54□□□□□ -1.52
RNF4-220ENST00000513578 LST1O00453 97 aa5.53□□□□□ -1.52
RNF4-220ENST00000513578 C9orf116Q5BN46 136 aaPredicted RBP5.53□□□□□ -1.52
RNF4-220ENST00000513578 TRBV10-2A0A0K0K1G8 114 aa5.52□□□□□ -1.53
RNF4-220ENST00000513578 H0YGX0 51 aa5.52□□□□□ -1.53
RNF4-220ENST00000513578 TLX1NBP0CAT3 122 aa5.52□□□□□ -1.53
RNF4-220ENST00000513578 LINC01620Q4KN68 170 aa5.52□□□□□ -1.53
RNF4-220ENST00000513578 LINC00526Q96FQ7 95 aa5.52□□□□□ -1.53
RNF4-220ENST00000513578 COL7A1Q02388 2944 aa5.52□□□□□ -1.53
RNF4-220ENST00000513578 STAB2Q8WWQ8 2551 aa5.52□□□□□ -1.53
RNF4-220ENST00000513578 NDUFC2-KCTD14E9PQ53 114 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 TRACP01848 142 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 SYCNQ0VAF6 134 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 WFDC2Q14508 124 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 HIGD2BQ4VC39 106 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 OCIAD2Q56VL3 154 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 Q6ZRU5 148 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 CARD19Q96LW7 228 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 TMEM126AQ9H061 195 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 Q9HAA7 133 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
RNF4-220ENST00000513578 K7ERU9 68 aa5.5□□□□□ -1.53
RNF4-220ENST00000513578 SLC25A20O43772 301 aa5.5□□□□□ -1.53
RNF4-220ENST00000513578 TTC32Q5I0X7 151 aa5.5□□□□□ -1.53
RNF4-220ENST00000513578 UBE2DNLQ8IWF7 75 aa5.5□□□□□ -1.53
RNF4-220ENST00000513578 SMIM11BQ8TCY0 68 aa5.5□□□□□ -1.53
RNF4-220ENST00000513578 C9JAW5 83 aa5.49□□□□□ -1.53
RNF4-220ENST00000513578 USP17L23D6RBM5 183 aa5.49□□□□□ -1.53
RNF4-220ENST00000513578 H3BT86 120 aa5.49□□□□□ -1.53
RNF4-220ENST00000513578 LINC00528Q8N1L1 170 aa5.49□□□□□ -1.53
RNF4-220ENST00000513578 A0A1B0GX51 115 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 IGLV6-57P01721 117 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 ETDBQ3ZM63 59 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 TEN1Q86WV5 123 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 ANKRD29Q8N6D5 301 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 Q8NDZ9 215 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 OR13C6PQ8NH95 151 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 CLEC2BQ92478 149 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 KRTAP1-5Q9BYS1 174 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 PLA2G2DQ9UNK4 145 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 VPS13DQ5THJ4 4388 aa5.48□□□□□ -1.53
RNF4-220ENST00000513578 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
RNF4-220ENST00000513578 VPREB1P12018 145 aa5.47□□□□□ -1.53
RNF4-220ENST00000513578 CASC10Q5T4H9 136 aa5.47□□□□□ -1.53
RNF4-220ENST00000513578 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
RNF4-220ENST00000513578 CBY1Q9Y3M2 126 aa5.47□□□□□ -1.53
RNF4-220ENST00000513578 DNAH7Q8WXX0 4024 aa5.46□□□□□ -1.53
RNF4-220ENST00000513578 NBDYA0A0U1RRE5 68 aa5.46□□□□□ -1.54
RNF4-220ENST00000513578 J3QR89 54 aa5.46□□□□□ -1.54
RNF4-220ENST00000513578 SLPIP03973 132 aa5.46□□□□□ -1.54
RNF4-220ENST00000513578 PRR3P79522 188 aaKnown RBP5.46□□□□□ -1.54
RNF4-220ENST00000513578 C14orf177Q52M58 125 aa5.46□□□□□ -1.54
RNF4-220ENST00000513578 IGLV5-37A0A075B6J1 123 aa5.45□□□□□ -1.54
RNF4-220ENST00000513578 M0R378 163 aa5.45□□□□□ -1.54
RNF4-220ENST00000513578 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
RNF4-220ENST00000513578 S100A7L2Q5SY68 101 aa5.45□□□□□ -1.54
RNF4-220ENST00000513578 Q6ZRP5 223 aa5.45□□□□□ -1.54
RNF4-220ENST00000513578 MTURNQ8N3F0 131 aa5.45□□□□□ -1.54
RNF4-220ENST00000513578 PPDPFLQ8WWR9 84 aa5.45□□□□□ -1.54
RNF4-220ENST00000513578 FAM218AQ96MZ4 157 aa5.45□□□□□ -1.54
RNF4-220ENST00000513578 LINC00167Q96N53 147 aa5.45□□□□□ -1.54
RNF4-220ENST00000513578 XAGE1AQ9HD64 81 aa5.45□□□□□ -1.54
RNF4-220ENST00000513578 PLECQ15149 4684 aaKnown RBP5.45□□□□□ -1.54
RNF4-220ENST00000513578 TRBV7-6A0A0J9YX20 115 aa5.44□□□□□ -1.54
RNF4-220ENST00000513578 LOC107984640A0A0U1RRK4 108 aa5.44□□□□□ -1.54
RNF4-220ENST00000513578 NCR3O14931 201 aa5.44□□□□□ -1.54
RNF4-220ENST00000513578 RPL18AQ02543 176 aaKnown RBP5.43□□□□□ -1.54
RNF4-220ENST00000513578 C9orf129Q5T035 196 aaKnown RBP5.43□□□□□ -1.54
RNF4-220ENST00000513578 RYR2Q92736 4967 aa5.42□□□□□ -1.54
RNF4-220ENST00000513578 A0A087WYN8 130 aa5.42□□□□□ -1.54
RNF4-220ENST00000513578 TRBV10-3A0A0K0K1G6 114 aa5.42□□□□□ -1.54
RNF4-220ENST00000513578 PSCAO43653 123 aa5.42□□□□□ -1.54
RNF4-220ENST00000513578 GAGE2EQ4V326 116 aa5.42□□□□□ -1.54
RNF4-220ENST00000513578 Q6ZRN7 208 aaPredicted RBP5.42□□□□□ -1.54
RNF4-220ENST00000513578 GAGE2DQ9UEU5 116 aa5.42□□□□□ -1.54
RNF4-220ENST00000513578 PKIGQ9Y2B9 76 aa5.42□□□□□ -1.54
RNF4-220ENST00000513578 TRAV23DV6A0A075B6W5 121 aa5.41□□□□□ -1.54
RNF4-220ENST00000513578 LRCOL1A6NCL2 159 aa5.41□□□□□ -1.54
RNF4-220ENST00000513578 SNCGO76070 127 aa5.41□□□□□ -1.54
RNF4-220ENST00000513578 DNAL4O96015 105 aa5.41□□□□□ -1.54
RNF4-220ENST00000513578 BAALC-AS2P0C853 105 aa5.41□□□□□ -1.54
RNF4-220ENST00000513578 TNP2Q05952 138 aa5.41□□□□□ -1.54
RNF4-220ENST00000513578 C6orf99Q4VX62 202 aa5.41□□□□□ -1.54
RNF4-220ENST00000513578 Q8N814 137 aa5.41□□□□□ -1.54
RNF4-220ENST00000513578 DNAH6Q9C0G6 4158 aa5.41□□□□□ -1.54
RNF4-220ENST00000513578 H3BQ85 93 aa5.4□□□□□ -1.54
RNF4-220ENST00000513578 LECT2O14960 151 aa5.4□□□□□ -1.54
RNF4-220ENST00000513578 LINC00575Q6W349 94 aa5.4□□□□□ -1.54
RNF4-220ENST00000513578 Q6ZR54 194 aa5.4□□□□□ -1.54
RNF4-220ENST00000513578 DIRC1Q969H9 104 aa5.4□□□□□ -1.54
RNF4-220ENST00000513578 KCNQ1DNQ9H478 68 aa5.4□□□□□ -1.54
RNF4-220ENST00000513578 C22orf24Q9Y442 160 aa5.4□□□□□ -1.54
RNF4-220ENST00000513578 C16orf90A8MZG2 172 aa5.39□□□□□ -1.55
RNF4-220ENST00000513578 ZNF73O43830 326 aaPredicted RBP5.39□□□□□ -1.55
RNF4-220ENST00000513578 WWC2-AS2Q96NR7 200 aa5.39□□□□□ -1.55
RNF4-220ENST00000513578 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
RNF4-220ENST00000513578 STARD9Q9P2P6 4700 aa5.38□□□□□ -1.55
RNF4-220ENST00000513578 ELOF1P60002 83 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms