RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 UBE2AP49459 152 aa5.52□□□□□ -1.53
TCOF1-212ENST00000513538 PRLHP81277 87 aa5.52□□□□□ -1.53
TCOF1-212ENST00000513538 ANKRD39Q53RE8 183 aa5.52□□□□□ -1.53
TCOF1-212ENST00000513538 H3BRM9 83 aa5.51□□□□□ -1.53
TCOF1-212ENST00000513538 PMCHL1Q16048 86 aa5.51□□□□□ -1.53
TCOF1-212ENST00000513538 KRTAP4-1Q9BYQ7 146 aa5.51□□□□□ -1.53
TCOF1-212ENST00000513538 IGKV2-28A0A075B6P5 120 aa5.5□□□□□ -1.53
TCOF1-212ENST00000513538 H3BS24 57 aa5.5□□□□□ -1.53
TCOF1-212ENST00000513538 IGKV2D-28P01615 120 aa5.5□□□□□ -1.53
TCOF1-212ENST00000513538 NDUFA5Q16718 116 aa5.5□□□□□ -1.53
TCOF1-212ENST00000513538 C3orf22Q8N5N4 141 aa5.5□□□□□ -1.53
TCOF1-212ENST00000513538 PPDPFQ9H3Y8 114 aa5.5□□□□□ -1.53
TCOF1-212ENST00000513538 IGKV2D-26A0A0A0MRZ7 120 aa5.49□□□□□ -1.53
TCOF1-212ENST00000513538 C11orf86A6NJI1 115 aa5.49□□□□□ -1.53
TCOF1-212ENST00000513538 TMEM238C9JI98 176 aa5.49□□□□□ -1.53
TCOF1-212ENST00000513538 ATP5LO75964 103 aa5.49□□□□□ -1.53
TCOF1-212ENST00000513538 RAB5BP61020 215 aa5.49□□□□□ -1.53
TCOF1-212ENST00000513538 NDUFA6P56556 154 aa5.48□□□□□ -1.53
TCOF1-212ENST00000513538 BAGE3Q86Y29 109 aa5.48□□□□□ -1.53
TCOF1-212ENST00000513538 NKAPP1Q8N9T2 125 aa5.48□□□□□ -1.53
TCOF1-212ENST00000513538 Q8NDZ9 215 aa5.48□□□□□ -1.53
TCOF1-212ENST00000513538 CHCHD1Q96BP2 118 aaKnown RBP5.48□□□□□ -1.53
TCOF1-212ENST00000513538 TRAV12-1A0A0B4J245 112 aa5.47□□□□□ -1.53
TCOF1-212ENST00000513538 VPREB1P12018 145 aa5.47□□□□□ -1.53
TCOF1-212ENST00000513538 KRTAP13-3Q3SY46 172 aa5.47□□□□□ -1.53
TCOF1-212ENST00000513538 ZNF625Q96I27 306 aaPredicted RBP5.47□□□□□ -1.53
TCOF1-212ENST00000513538 TMEM126AQ9H061 195 aa5.47□□□□□ -1.53
TCOF1-212ENST00000513538 M0R378 163 aa5.46□□□□□ -1.54
TCOF1-212ENST00000513538 CTAG1AP78358 180 aa5.46□□□□□ -1.54
TCOF1-212ENST00000513538 COX17Q14061 63 aa5.46□□□□□ -1.54
TCOF1-212ENST00000513538 ASB16-AS1Q495Z4 193 aa5.46□□□□□ -1.54
TCOF1-212ENST00000513538 SFTA2Q6UW10 78 aa5.46□□□□□ -1.54
TCOF1-212ENST00000513538 FAM19A1Q7Z5A9 133 aa5.46□□□□□ -1.54
TCOF1-212ENST00000513538 CBLN2Q8IUK8 224 aa5.46□□□□□ -1.54
TCOF1-212ENST00000513538 PLEKHB2Q96CS7 222 aa5.46□□□□□ -1.54
TCOF1-212ENST00000513538 SND1-IT1Q9HBX3 110 aa5.46□□□□□ -1.54
TCOF1-212ENST00000513538 ERG28Q9UKR5 140 aa5.46□□□□□ -1.54
TCOF1-212ENST00000513538 CHTOPQ9Y3Y2 248 aaKnown RBP5.46□□□□□ -1.54
TCOF1-212ENST00000513538 TMEM223A0PJW6 202 aa5.45□□□□□ -1.54
TCOF1-212ENST00000513538 PFN2P35080 140 aa5.45□□□□□ -1.54
TCOF1-212ENST00000513538 LINC00310P59036 64 aa5.45□□□□□ -1.54
TCOF1-212ENST00000513538 IFI27L1Q96BM0 104 aa5.45□□□□□ -1.54
TCOF1-212ENST00000513538 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
TCOF1-212ENST00000513538 TMEM170BQ5T4T1 132 aa5.44□□□□□ -1.54
TCOF1-212ENST00000513538 TRGC2P03986 189 aa5.43□□□□□ -1.54
TCOF1-212ENST00000513538 LINC01547P58512 204 aaPredicted RBP5.43□□□□□ -1.54
TCOF1-212ENST00000513538 FP248Q71RG6 208 aaPredicted RBP5.43□□□□□ -1.54
TCOF1-212ENST00000513538 FAM19A2Q8N3H0 131 aa5.43□□□□□ -1.54
TCOF1-212ENST00000513538 HIGD2AQ9BW72 106 aa5.43□□□□□ -1.54
TCOF1-212ENST00000513538 COLCA2A8K830 154 aa5.42□□□□□ -1.54
TCOF1-212ENST00000513538 RPL24P83731 157 aaKnown RBP5.42□□□□□ -1.54
TCOF1-212ENST00000513538 SLC7A5P1Q8MH63 180 aa5.42□□□□□ -1.54
TCOF1-212ENST00000513538 DAND5Q8N907 189 aa5.42□□□□□ -1.54
TCOF1-212ENST00000513538 SPRR4Q96PI1 79 aa5.42□□□□□ -1.54
TCOF1-212ENST00000513538 HSBP1O75506 76 aa5.41□□□□□ -1.54
TCOF1-212ENST00000513538 SPAG11AQ6PDA7 123 aa5.41□□□□□ -1.54
TCOF1-212ENST00000513538 SERF1AO75920 110 aa5.4□□□□□ -1.54
TCOF1-212ENST00000513538 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.54
TCOF1-212ENST00000513538 Q8NBF4 154 aa5.4□□□□□ -1.54
TCOF1-212ENST00000513538 ATP6V1G1O75348 118 aa5.39□□□□□ -1.55
TCOF1-212ENST00000513538 LINC00587B1AMM8 73 aa5.38□□□□□ -1.55
TCOF1-212ENST00000513538 LEPROTL1O95214 131 aa5.38□□□□□ -1.55
TCOF1-212ENST00000513538 SMIM13P0DJ93 91 aa5.38□□□□□ -1.55
TCOF1-212ENST00000513538 LINC00158P58513 81 aa5.38□□□□□ -1.55
TCOF1-212ENST00000513538 KRTAP19-2Q3LHN2 52 aa5.38□□□□□ -1.55
TCOF1-212ENST00000513538 LOC107984156A0A0G2JMH3 177 aa5.37□□□□□ -1.55
TCOF1-212ENST00000513538 A0A0U1RRA0 63 aa5.37□□□□□ -1.55
TCOF1-212ENST00000513538 TSPEAR-AS2P59090 65 aa5.37□□□□□ -1.55
TCOF1-212ENST00000513538 SEC61BP60468 96 aaKnown RBP5.37□□□□□ -1.55
TCOF1-212ENST00000513538 HERV-K104P63124 156 aa5.37□□□□□ -1.55
TCOF1-212ENST00000513538 ARL17AQ8IVW1 177 aa5.37□□□□□ -1.55
TCOF1-212ENST00000513538 SPRR1AP35321 89 aa5.36□□□□□ -1.55
TCOF1-212ENST00000513538 MIR7-3HGQ8N6C7 128 aa5.36□□□□□ -1.55
TCOF1-212ENST00000513538 NDUFA12Q9UI09 145 aa5.36□□□□□ -1.55
TCOF1-212ENST00000513538 KRTAP4-16G5E9R7 235 aaPredicted RBP5.35□□□□□ -1.55
TCOF1-212ENST00000513538 LEPROTO15243 131 aa5.35□□□□□ -1.55
TCOF1-212ENST00000513538 SPINK1P00995 79 aa5.35□□□□□ -1.55
TCOF1-212ENST00000513538 Q8N377 158 aa5.35□□□□□ -1.55
TCOF1-212ENST00000513538 MAP1LC3CQ9BXW4 147 aa5.35□□□□□ -1.55
TCOF1-212ENST00000513538 MYMXA0A1B0GTQ4 84 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 FABP4P15090 132 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 PLNP26678 52 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 MT1HP80294 61 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 S100A12P80511 92 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 LINC00483Q53H64 154 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 MEIG1Q5JSS6 88 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 XP32Q5T750 250 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 BOD1L2Q8IYS8 172 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 SMCR5Q8TEV8 140 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 KCNQ1DNQ9H478 68 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 HSPB8Q9UJY1 196 aa5.34□□□□□ -1.55
TCOF1-212ENST00000513538 ZNF706Q9Y5V0 76 aaPredicted RBP5.34□□□□□ -1.55
TCOF1-212ENST00000513538 H0Y8G0 127 aa5.33□□□□□ -1.56
TCOF1-212ENST00000513538 J3QQQ9 107 aa5.33□□□□□ -1.56
TCOF1-212ENST00000513538 PRYO14603 147 aa5.33□□□□□ -1.56
TCOF1-212ENST00000513538 DPM2O94777 84 aa5.33□□□□□ -1.56
TCOF1-212ENST00000513538 PMCHL2Q9BQD1 86 aa5.33□□□□□ -1.56
TCOF1-212ENST00000513538 HIST1H2BKO60814 126 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 IGKCP01834 107 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 HIST1H2BJP06899 126 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms