RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 TMEM238C9JI98 176 aa11.3□□□□□ -0.6
MATR3-221ENST00000513121 LINC00310P59036 64 aa11.3□□□□□ -0.6
MATR3-221ENST00000513121 SLC7A5P1Q8MH63 180 aa11.3□□□□□ -0.6
MATR3-221ENST00000513121 A0A0U1RRA0 63 aa11.29□□□□□ -0.6
MATR3-221ENST00000513121 HSBP1O75506 76 aa11.28□□□□□ -0.6
MATR3-221ENST00000513121 UBE2AP49459 152 aa11.28□□□□□ -0.6
MATR3-221ENST00000513121 LINC00158P58513 81 aa11.27□□□□□ -0.61
MATR3-221ENST00000513121 M0R378 163 aa11.26□□□□□ -0.61
MATR3-221ENST00000513121 PRLHP81277 87 aa11.26□□□□□ -0.61
MATR3-221ENST00000513121 RPL24P83731 157 aaKnown RBP11.26□□□□□ -0.61
MATR3-221ENST00000513121 SERF1AO75920 110 aa11.25□□□□□ -0.61
MATR3-221ENST00000513121 SFTA2Q6UW10 78 aa11.25□□□□□ -0.61
MATR3-221ENST00000513121 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
MATR3-221ENST00000513121 SMIM13P0DJ93 91 aa11.24□□□□□ -0.61
MATR3-221ENST00000513121 CRYGAP11844 174 aa11.24□□□□□ -0.61
MATR3-221ENST00000513121 KRTAP13-2Q52LG2 175 aa11.24□□□□□ -0.61
MATR3-221ENST00000513121 H0Y8G0 127 aa11.23□□□□□ -0.61
MATR3-221ENST00000513121 TSPAN13O95857 204 aa11.23□□□□□ -0.61
MATR3-221ENST00000513121 COLCA2A8K830 154 aa11.22□□□□□ -0.61
MATR3-221ENST00000513121 FAM19A1Q7Z5A9 133 aa11.22□□□□□ -0.61
MATR3-221ENST00000513121 TYMSOSQ8TAI1 123 aa11.21□□□□□ -0.61
MATR3-221ENST00000513121 LEPROTL1O95214 131 aa11.2□□□□□ -0.62
MATR3-221ENST00000513121 TSPEAR-AS2P59090 65 aa11.2□□□□□ -0.62
MATR3-221ENST00000513121 PRR4Q16378 134 aa11.2□□□□□ -0.62
MATR3-221ENST00000513121 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
MATR3-221ENST00000513121 NDUFA12Q9UI09 145 aa11.19□□□□□ -0.62
MATR3-221ENST00000513121 MEIG1Q5JSS6 88 aa11.18□□□□□ -0.62
MATR3-221ENST00000513121 FABP4P15090 132 aa11.17□□□□□ -0.62
MATR3-221ENST00000513121 BOD1L2Q8IYS8 172 aa11.17□□□□□ -0.62
MATR3-221ENST00000513121 PMCHL2Q9BQD1 86 aa11.17□□□□□ -0.62
MATR3-221ENST00000513121 FAM229BQ4G0N7 80 aa11.16□□□□□ -0.62
MATR3-221ENST00000513121 PLEKHB2Q96CS7 222 aa11.16□□□□□ -0.62
MATR3-221ENST00000513121 HERV-K104P63124 156 aa11.15□□□□□ -0.62
MATR3-221ENST00000513121 NCR3O14931 201 aa11.14□□□□□ -0.63
MATR3-221ENST00000513121 ATP6V1G1O75348 118 aa11.14□□□□□ -0.63
MATR3-221ENST00000513121 MYMXA0A1B0GTQ4 84 aa11.13□□□□□ -0.63
MATR3-221ENST00000513121 LEPROTO15243 131 aa11.13□□□□□ -0.63
MATR3-221ENST00000513121 DAND5Q8N907 189 aa11.13□□□□□ -0.63
MATR3-221ENST00000513121 HIGD2AQ9BW72 106 aa11.13□□□□□ -0.63
MATR3-221ENST00000513121 HSPB8Q9UJY1 196 aa11.12□□□□□ -0.63
MATR3-221ENST00000513121 MUC2Q02817 5179 aa11.1□□□□□ -0.63
MATR3-221ENST00000513121 DPM2O94777 84 aa11.1□□□□□ -0.63
MATR3-221ENST00000513121 PLNP26678 52 aa11.1□□□□□ -0.63
MATR3-221ENST00000513121 C3orf22Q8N5N4 141 aa11.1□□□□□ -0.63
MATR3-221ENST00000513121 IGKV2D-26A0A0A0MRZ7 120 aa11.09□□□□□ -0.63
MATR3-221ENST00000513121 TRBV10-3A0A0K0K1G6 114 aa11.09□□□□□ -0.63
MATR3-221ENST00000513121 KRTAP4-16G5E9R7 235 aaPredicted RBP11.09□□□□□ -0.63
MATR3-221ENST00000513121 J3QQQ9 107 aa11.09□□□□□ -0.63
MATR3-221ENST00000513121 SPRR1AP35321 89 aa11.09□□□□□ -0.63
MATR3-221ENST00000513121 KCNQ1DNQ9H478 68 aa11.09□□□□□ -0.63
MATR3-221ENST00000513121 LINC00587B1AMM8 73 aa11.08□□□□□ -0.64
MATR3-221ENST00000513121 PRYO14603 147 aa11.08□□□□□ -0.64
MATR3-221ENST00000513121 IGKCP01834 107 aa11.08□□□□□ -0.64
MATR3-221ENST00000513121 LINC00304Q8N9R0 145 aa11.08□□□□□ -0.64
MATR3-221ENST00000513121 LOC107984156A0A0G2JMH3 177 aa11.07□□□□□ -0.64
MATR3-221ENST00000513121 ARL17AQ8IVW1 177 aa11.07□□□□□ -0.64
MATR3-221ENST00000513121 SPRR4Q96PI1 79 aa11.07□□□□□ -0.64
MATR3-221ENST00000513121 RETNLBQ9BQ08 111 aa11.07□□□□□ -0.64
MATR3-221ENST00000513121 MAP1LC3CQ9BXW4 147 aa11.07□□□□□ -0.64
MATR3-221ENST00000513121 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
MATR3-221ENST00000513121 EIF4EBP3O60516 100 aaPredicted RBP11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST1H2BKO60814 126 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST1H2BJP06899 126 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST1H2BOP23527 126 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST1H2BBP33778 126 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST1H2BDP58876 126 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HERVK_113P61574 105 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST1H2BCP62807 126 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST2H2BEQ16778 126 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.04□□□□□ -0.64
MATR3-221ENST00000513121 SMCR5Q8TEV8 140 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST1H2BHQ93079 126 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST1H2BNQ99877 126 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 HIST1H2BMQ99879 126 aa11.04□□□□□ -0.64
MATR3-221ENST00000513121 LGALS3P17931 250 aaKnown RBP11.03□□□□□ -0.64
MATR3-221ENST00000513121 MUC17Q685J3 4493 aa11.02□□□□□ -0.65
MATR3-221ENST00000513121 NMUP48645 174 aa11.02□□□□□ -0.65
MATR3-221ENST00000513121 ADAMTSL4-AS1Q5T5F5 129 aa11.02□□□□□ -0.65
MATR3-221ENST00000513121 SOSTDC1Q6X4U4 206 aa11.02□□□□□ -0.65
MATR3-221ENST00000513121 ETDCA0A1B0GVM5 59 aa11□□□□□ -0.65
MATR3-221ENST00000513121 B5MCH6 92 aa11□□□□□ -0.65
MATR3-221ENST00000513121 SYS1-DBNDD2H3BUS1 97 aa11□□□□□ -0.65
MATR3-221ENST00000513121 PPDPFQ9H3Y8 114 aa11□□□□□ -0.65
MATR3-221ENST00000513121 A0A0J9YXY3 114 aa10.99□□□□□ -0.65
MATR3-221ENST00000513121 TRBV10-2A0A0K0K1G8 114 aa10.99□□□□□ -0.65
MATR3-221ENST00000513121 E9PLD3 99 aa10.99□□□□□ -0.65
MATR3-221ENST00000513121 ERC2-IT1O76042 136 aa10.99□□□□□ -0.65
MATR3-221ENST00000513121 DDTP30046 118 aa10.99□□□□□ -0.65
MATR3-221ENST00000513121 NPC2P61916 151 aa10.98□□□□□ -0.65
MATR3-221ENST00000513121 ZNF706Q9Y5V0 76 aaPredicted RBP10.97□□□□□ -0.65
MATR3-221ENST00000513121 LCE2BO14633 110 aa10.96□□□□□ -0.65
MATR3-221ENST00000513121 IGLV6-57P01721 117 aa10.96□□□□□ -0.65
MATR3-221ENST00000513121 SPANXB1Q9NS25 103 aaPredicted RBP10.96□□□□□ -0.65
MATR3-221ENST00000513121 LINC01545Q5VT33 79 aa10.95□□□□□ -0.66
MATR3-221ENST00000513121 Q9BRP9 147 aa10.95□□□□□ -0.66
MATR3-221ENST00000513121 NDUFC2O95298 119 aa10.94□□□□□ -0.66
MATR3-221ENST00000513121 LINC00483Q53H64 154 aa10.94□□□□□ -0.66
MATR3-221ENST00000513121 GAGE2AQ6NT46 116 aa10.94□□□□□ -0.66
MATR3-221ENST00000513121 LITAFQ99732 161 aa10.94□□□□□ -0.66
MATR3-221ENST00000513121 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms