RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 FAM218AQ96MZ4 157 aa8.61□□□□□ -1.03
COL11A1-210ENST00000512756 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
COL11A1-210ENST00000512756 LIMD2Q9BT23 127 aa8.6□□□□□ -1.03
COL11A1-210ENST00000512756 ELOF1P60002 83 aaKnown RBP8.6□□□□□ -1.03
COL11A1-210ENST00000512756 LINC00167Q96N53 147 aa8.6□□□□□ -1.03
COL11A1-210ENST00000512756 X6R8D5 127 aa8.59□□□□□ -1.03
COL11A1-210ENST00000512756 SMIM29Q86T20 159 aa8.59□□□□□ -1.03
COL11A1-210ENST00000512756 LOC110117498A0A087WWA1 95 aa8.58□□□□□ -1.04
COL11A1-210ENST00000512756 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
COL11A1-210ENST00000512756 PTPRBP23467 1997 aa8.57□□□□□ -1.04
COL11A1-210ENST00000512756 Q9UF83 564 aa8.57□□□□□ -1.04
COL11A1-210ENST00000512756 Q6ZQT0 140 aa8.57□□□□□ -1.04
COL11A1-210ENST00000512756 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
COL11A1-210ENST00000512756 RETNLBQ9BQ08 111 aa8.55□□□□□ -1.04
COL11A1-210ENST00000512756 SRCAPQ6ZRS2 3230 aa8.54□□□□□ -1.04
COL11A1-210ENST00000512756 Q8NBF4 154 aa8.54□□□□□ -1.04
COL11A1-210ENST00000512756 Q6ZRX8 168 aa8.53□□□□□ -1.04
COL11A1-210ENST00000512756 COL4A2P08572 1712 aa8.53□□□□□ -1.04
COL11A1-210ENST00000512756 H3BPC8 53 aa8.53□□□□□ -1.04
COL11A1-210ENST00000512756 LITAFQ99732 161 aa8.53□□□□□ -1.04
COL11A1-210ENST00000512756 SPINK1P00995 79 aa8.52□□□□□ -1.05
COL11A1-210ENST00000512756 GVQW2A0A096LPI5 108 aaPredicted RBP8.52□□□□□ -1.05
COL11A1-210ENST00000512756 PRO0628Q9UI54 55 aa8.52□□□□□ -1.05
COL11A1-210ENST00000512756 MUC4Q99102 2169 aa8.51□□□□□ -1.05
COL11A1-210ENST00000512756 FSHBP01225 129 aa8.5□□□□□ -1.05
COL11A1-210ENST00000512756 COL27A1Q8IZC6 1860 aaPredicted RBP8.5□□□□□ -1.05
COL11A1-210ENST00000512756 MDFIQ99750 246 aa8.5□□□□□ -1.05
COL11A1-210ENST00000512756 MTORP42345 2549 aa8.49□□□□□ -1.05
COL11A1-210ENST00000512756 LINC00476Q8WZB0 136 aa8.49□□□□□ -1.05
COL11A1-210ENST00000512756 Q8NAQ8 132 aa8.48□□□□□ -1.05
COL11A1-210ENST00000512756 MOBPQ13875 183 aa8.48□□□□□ -1.05
COL11A1-210ENST00000512756 ZNF462Q96JM2 2506 aa8.47□□□□□ -1.05
COL11A1-210ENST00000512756 ACYP2P14621 99 aa8.47□□□□□ -1.05
COL11A1-210ENST00000512756 IGKV2D-30A0A075B6S6 120 aa8.47□□□□□ -1.05
COL11A1-210ENST00000512756 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
COL11A1-210ENST00000512756 C16orf90A8MZG2 172 aa8.46□□□□□ -1.06
COL11A1-210ENST00000512756 SPTBN4Q9H254 2564 aa8.45□□□□□ -1.06
COL11A1-210ENST00000512756 IGLV6-57P01721 117 aa8.45□□□□□ -1.06
COL11A1-210ENST00000512756 CHD8Q9HCK8 2581 aa8.45□□□□□ -1.06
COL11A1-210ENST00000512756 A0A1B0GU69 56 aa8.44□□□□□ -1.06
COL11A1-210ENST00000512756 TRAV22A0A0B4J277 110 aa8.43□□□□□ -1.06
COL11A1-210ENST00000512756 TRBV7-4A0A0J9YYF1 115 aa8.43□□□□□ -1.06
COL11A1-210ENST00000512756 VPREB1P12018 145 aa8.43□□□□□ -1.06
COL11A1-210ENST00000512756 EPM2AB3EWF7 344 aa8.43□□□□□ -1.06
COL11A1-210ENST00000512756 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
COL11A1-210ENST00000512756 PHF5AQ7RTV0 110 aaKnown RBP8.43□□□□□ -1.06
COL11A1-210ENST00000512756 TM2D3Q9BRN9 247 aa8.42□□□□□ -1.06
COL11A1-210ENST00000512756 LINC00588Q9Y4M8 146 aa8.41□□□□□ -1.06
COL11A1-210ENST00000512756 ST20-AS1Q8NBB2 130 aa8.41□□□□□ -1.06
COL11A1-210ENST00000512756 SPACA4Q8TDM5 124 aa8.41□□□□□ -1.06
COL11A1-210ENST00000512756 CENPFP49454 3210 aa8.41□□□□□ -1.06
COL11A1-210ENST00000512756 DNAH10OSP0CZ25 163 aa8.4□□□□□ -1.06
COL11A1-210ENST00000512756 Q6ZRP5 223 aa8.4□□□□□ -1.06
COL11A1-210ENST00000512756 NBDYA0A0U1RRE5 68 aa8.4□□□□□ -1.07
COL11A1-210ENST00000512756 ERC2-IT1O76042 136 aa8.4□□□□□ -1.07
COL11A1-210ENST00000512756 PCSK5Q92824 1860 aa8.39□□□□□ -1.07
COL11A1-210ENST00000512756 C4orf26Q17RF5 130 aa8.39□□□□□ -1.07
COL11A1-210ENST00000512756 ANKRD17O75179 2603 aaKnown RBP8.38□□□□□ -1.07
COL11A1-210ENST00000512756 KRTAP24-1Q3LI83 254 aa8.38□□□□□ -1.07
COL11A1-210ENST00000512756 CSNK1G2-AS1Q8NCQ2 148 aa8.38□□□□□ -1.07
COL11A1-210ENST00000512756 POLQO75417 2590 aa8.37□□□□□ -1.07
COL11A1-210ENST00000512756 RTL8CO15255 209 aa8.37□□□□□ -1.07
COL11A1-210ENST00000512756 LINC00313P59037 77 aa8.36□□□□□ -1.07
COL11A1-210ENST00000512756 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
COL11A1-210ENST00000512756 SPAG11AQ6PDA7 123 aa8.36□□□□□ -1.07
COL11A1-210ENST00000512756 A8MWP4 228 aa8.35□□□□□ -1.07
COL11A1-210ENST00000512756 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
COL11A1-210ENST00000512756 LOC101927531A0A1B0GV80 90 aa8.34□□□□□ -1.07
COL11A1-210ENST00000512756 IGLV1-50A0A075B6I6 118 aa8.34□□□□□ -1.07
COL11A1-210ENST00000512756 ACANP16112 2415 aa8.33□□□□□ -1.08
COL11A1-210ENST00000512756 RPL37AP61513 92 aaKnown RBP8.33□□□□□ -1.08
COL11A1-210ENST00000512756 PRR34Q9NV39 138 aa8.33□□□□□ -1.08
COL11A1-210ENST00000512756 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
COL11A1-210ENST00000512756 EIF4EBP3O60516 100 aaPredicted RBP8.32□□□□□ -1.08
COL11A1-210ENST00000512756 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
COL11A1-210ENST00000512756 K7EQZ3 153 aa8.3□□□□□ -1.08
COL11A1-210ENST00000512756 FASNP49327 2511 aaKnown RBP8.3□□□□□ -1.08
COL11A1-210ENST00000512756 CHTF8P0CG12 524 aa8.3□□□□□ -1.08
COL11A1-210ENST00000512756 TYMSOSQ8TAI1 123 aa8.3□□□□□ -1.08
COL11A1-210ENST00000512756 FAM229AH3BQW9 127 aa8.3□□□□□ -1.08
COL11A1-210ENST00000512756 FAM168BA1KXE4 195 aa8.29□□□□□ -1.08
COL11A1-210ENST00000512756 MRPL34Q9BQ48 92 aaKnown RBP8.28□□□□□ -1.08
COL11A1-210ENST00000512756 LINC00612Q8N6U2 182 aa8.28□□□□□ -1.08
COL11A1-210ENST00000512756 F8P00451 2351 aa8.28□□□□□ -1.08
COL11A1-210ENST00000512756 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
COL11A1-210ENST00000512756 ATP11AUNQ6ZP68 121 aa8.27□□□□□ -1.09
COL11A1-210ENST00000512756 GIG44P09565 113 aaPredicted RBP8.26□□□□□ -1.09
COL11A1-210ENST00000512756 C19orf73Q9NVV2 129 aa8.26□□□□□ -1.09
COL11A1-210ENST00000512756 A0A096LNT2 108 aa8.25□□□□□ -1.09
COL11A1-210ENST00000512756 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
COL11A1-210ENST00000512756 IGFL1Q6UW32 110 aa8.25□□□□□ -1.09
COL11A1-210ENST00000512756 C15orf56Q8N910 161 aa8.25□□□□□ -1.09
COL11A1-210ENST00000512756 PLA2G2DQ9UNK4 145 aa8.24□□□□□ -1.09
COL11A1-210ENST00000512756 PRR15Q8IV56 129 aa8.23□□□□□ -1.09
COL11A1-210ENST00000512756 TLX1NBP0CAT3 122 aa8.23□□□□□ -1.09
COL11A1-210ENST00000512756 COA5Q86WW8 74 aa8.23□□□□□ -1.09
COL11A1-210ENST00000512756 Q8N377 158 aa8.22□□□□□ -1.09
COL11A1-210ENST00000512756 Q96NJ1 140 aa8.22□□□□□ -1.09
COL11A1-210ENST00000512756 C9orf129Q5T035 196 aaKnown RBP8.2□□□□□ -1.1
COL11A1-210ENST00000512756 C8orf17Q9NRJ1 99 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms