RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 AP1S3Q96PC3 154 aa3.75□□□□□ -1.81
PDLIM3-208ENST00000512380 IGHV3-64A0A075B6Q5 118 aa3.74□□□□□ -1.81
PDLIM3-208ENST00000512380 SPINK4O60575 86 aa3.74□□□□□ -1.81
PDLIM3-208ENST00000512380 ASIPP42127 132 aa3.74□□□□□ -1.81
PDLIM3-208ENST00000512380 TDRG1Q3Y452 100 aa3.74□□□□□ -1.81
PDLIM3-208ENST00000512380 Q6ZTI0 123 aa3.74□□□□□ -1.81
PDLIM3-208ENST00000512380 PHF5AQ7RTV0 110 aaKnown RBP3.74□□□□□ -1.81
PDLIM3-208ENST00000512380 MEGF8Q7Z7M0 2845 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 TRGV4A0A0C4DH28 118 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 MT-ND4LP03901 98 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 ARMS2P0C7Q2 107 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 TRGC1P0CF51 173 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 P0DMU3 169 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 FAM231AP0DMU4 169 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 FAM231CP0DMU5 169 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 HINT1P49773 126 aaPredicted RBP3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 KRTAP13-2Q52LG2 175 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 CLLU1Q5K131 121 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 Q5XG85 94 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 SMIM7Q9BQ49 75 aa3.73□□□□□ -1.81
PDLIM3-208ENST00000512380 TRBV7-6A0A0J9YX20 115 aa3.72□□□□□ -1.81
PDLIM3-208ENST00000512380 A0A0J9YY99 117 aa3.72□□□□□ -1.81
PDLIM3-208ENST00000512380 NDUFA5Q16718 116 aa3.72□□□□□ -1.81
PDLIM3-208ENST00000512380 SPANXN1Q5VSR9 72 aa3.72□□□□□ -1.81
PDLIM3-208ENST00000512380 TRAV13-1A0A0B4J241 112 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 MUC21A0A0G2JKD1 596 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 MUC21A0A140T8X8 626 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 A8MWV9 139 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 F2Z2F3 143 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 H3BMG7 143 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 H3BVH4 76 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 K7EP13 123 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 TIMM17BO60830 172 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 LY6G6CO95867 125 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 RNASE3P12724 160 aaKnown RBP3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 FUSP35637 526 aaKnown RBP eCLIP3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 TMEM258P61165 79 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 Q6ZQT0 140 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 APLNQ9ULZ1 77 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 LY96Q9Y6Y9 160 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 NBEAL2Q6ZNJ1 2754 aa3.71□□□□□ -1.82
PDLIM3-208ENST00000512380 A0A1B0GV90 55 aa3.7□□□□□ -1.82
PDLIM3-208ENST00000512380 MT-ND6P03923 174 aa3.7□□□□□ -1.82
PDLIM3-208ENST00000512380 SFTA3P0C7M3 94 aa3.7□□□□□ -1.82
PDLIM3-208ENST00000512380 EVI2AP22794 236 aa3.7□□□□□ -1.82
PDLIM3-208ENST00000512380 ADIRFQ15847 76 aa3.7□□□□□ -1.82
PDLIM3-208ENST00000512380 CFAP126Q5VTH2 177 aa3.7□□□□□ -1.82
PDLIM3-208ENST00000512380 C15orf53Q8NAA6 179 aa3.7□□□□□ -1.82
PDLIM3-208ENST00000512380 PRO0255Q9UI72 69 aa3.7□□□□□ -1.82
PDLIM3-208ENST00000512380 F8W036 122 aa3.69□□□□□ -1.82
PDLIM3-208ENST00000512380 CCL18P55774 89 aa3.69□□□□□ -1.82
PDLIM3-208ENST00000512380 FAM74A4Q5TZK3 123 aa3.69□□□□□ -1.82
PDLIM3-208ENST00000512380 UBE2DNLQ8IWF7 75 aa3.69□□□□□ -1.82
PDLIM3-208ENST00000512380 NHP2Q9NX24 153 aaKnown RBP3.69□□□□□ -1.82
PDLIM3-208ENST00000512380 A0A096LPF7 62 aa3.68□□□□□ -1.82
PDLIM3-208ENST00000512380 TRBV6-4A0A1B0GX49 114 aa3.68□□□□□ -1.82
PDLIM3-208ENST00000512380 TMEM218A2RU14 115 aa3.68□□□□□ -1.82
PDLIM3-208ENST00000512380 H3BNG1 76 aa3.68□□□□□ -1.82
PDLIM3-208ENST00000512380 OR10AG1Q8NH19 301 aa3.68□□□□□ -1.82
PDLIM3-208ENST00000512380 TSKUQ8WUA8 353 aa3.68□□□□□ -1.82
PDLIM3-208ENST00000512380 PSORS1C2Q9UIG4 136 aa3.68□□□□□ -1.82
PDLIM3-208ENST00000512380 IGLV10-54A0A075B6I4 117 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 A0A1W2PNN7 141 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 IGLV6-57P01721 117 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 MGPP08493 103 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 IGLC6P0CF74 106 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 FOXA3P55318 350 aaPredicted RBP3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 ZNF56Q15929 161 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 ESRGQ1W209 222 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 LYPD5Q6UWN5 251 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 C7orf65Q6ZTY9 151 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 PRELID3AQ96N28 172 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 DNAH3Q8TD57 4116 aa3.67□□□□□ -1.82
PDLIM3-208ENST00000512380 TRBV27A0A0K0K1C4 114 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 LCE6AA0A183 80 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 A0A1B0GUT8 65 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 HIGD1CA8MV81 97 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 RHOHQ15669 191 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 IGFL1Q6UW32 110 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 ATP6V0E2Q8NHE4 81 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 Q9BRP9 147 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 SEC11CQ9BY50 192 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 NIT2Q9NQR4 276 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 V9GYV3 84 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 TGP01266 2768 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 DNAH9Q9NYC9 4486 aa3.66□□□□□ -1.82
PDLIM3-208ENST00000512380 SMIM27A0A1W2PRY6 76 aa3.65□□□□□ -1.83
PDLIM3-208ENST00000512380 LINC00587B1AMM8 73 aa3.65□□□□□ -1.83
PDLIM3-208ENST00000512380 M0R2N4 97 aa3.65□□□□□ -1.83
PDLIM3-208ENST00000512380 CHCHD1Q96BP2 118 aaKnown RBP3.65□□□□□ -1.83
PDLIM3-208ENST00000512380 DPH3P1Q9H4G8 78 aa3.65□□□□□ -1.83
PDLIM3-208ENST00000512380 HUWE1Q7Z6Z7 4374 aaKnown RBP3.65□□□□□ -1.83
PDLIM3-208ENST00000512380 TRBV7-3A0A075B6L6 115 aa3.64□□□□□ -1.83
PDLIM3-208ENST00000512380 TRBV10-1A0A0K0K1A3 114 aa3.64□□□□□ -1.83
PDLIM3-208ENST00000512380 TMEM262E9PQX1 116 aa3.64□□□□□ -1.83
PDLIM3-208ENST00000512380 J3QR89 54 aa3.64□□□□□ -1.83
PDLIM3-208ENST00000512380 S100A8P05109 93 aa3.64□□□□□ -1.83
PDLIM3-208ENST00000512380 S100PP25815 95 aa3.64□□□□□ -1.83
PDLIM3-208ENST00000512380 RETNLBQ9BQ08 111 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms