RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	SPAG11B	Q08648	103 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	SYCN	Q0VAF6	134 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	CIRBP	Q14011	172 aa	Known RBP	3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	SDIM1	Q6ZPB5	146 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	OR10D4P	Q8NGN7	298 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	C18orf32	Q8TCD1	76 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	SPACA4	Q8TDM5	124 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	ORAOV1	Q8WV07	137 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	YPEL4	Q96NS1	127 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	SCGB3A1	Q96QR1	104 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	CAMK2N2	Q96S95	79 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	AMELX	Q99217	191 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	VCX2	Q9H322	139 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	PKIG	Q9Y2B9	76 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978	ABCA13	Q86UQ4	5058 aa		3.18	□□□□□ -1.9
MATR3-218	ENST00000511978		A0A096LNI7	61 aa		3.17	□□□□□ -1.9
MATR3-218	ENST00000511978	IGKV2-24	A0A0C4DH68	120 aa		3.17	□□□□□ -1.9
MATR3-218	ENST00000511978	KRTAP10-8	P60410	259 aa		3.17	□□□□□ -1.9
MATR3-218	ENST00000511978		Q6ZRU5	148 aa		3.17	□□□□□ -1.9
MATR3-218	ENST00000511978	DNAH8	Q96JB1	4490 aa		3.17	□□□□□ -1.9
MATR3-218	ENST00000511978		A0A096LNJ9	63 aa		3.16	□□□□□ -1.9
MATR3-218	ENST00000511978	LINC01549	A6NIU2	74 aa		3.16	□□□□□ -1.9
MATR3-218	ENST00000511978	NDUFA1	O15239	70 aa		3.16	□□□□□ -1.9
MATR3-218	ENST00000511978	HBD	P02042	147 aa		3.16	□□□□□ -1.9
MATR3-218	ENST00000511978	HERVK_113	P63121	156 aa		3.16	□□□□□ -1.9
MATR3-218	ENST00000511978	PMCHL1	Q16048	86 aa		3.16	□□□□□ -1.9
MATR3-218	ENST00000511978	MAJIN	Q3KP22	176 aa		3.16	□□□□□ -1.9
MATR3-218	ENST00000511978	FAM19A3	Q7Z5A8	133 aa		3.16	□□□□□ -1.9
MATR3-218	ENST00000511978	GEMIN7	Q9H840	131 aa	Known RBP	3.16	□□□□□ -1.9
MATR3-218	ENST00000511978	FAT1	Q14517	4588 aa		3.16	□□□□□ -1.9
MATR3-218	ENST00000511978		A0A0J9YXV3	536 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	LOC107984640	A0A0U1RRK4	108 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	LINC00614	P0C842	121 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	INAFM2	P0DMQ5	153 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	RAB5B	P61020	215 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	SEC11A	P67812	179 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	RPL18A	Q02543	176 aa	Known RBP	3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	PMVK	Q15126	192 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	LINC00469	Q8N7U9	141 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	DPH3	Q96FX2	82 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	PACRG	Q96M98	296 aa	Predicted RBP	3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	CST9L	Q9H4G1	147 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	MRPL35	Q9NZE8	188 aa	Known RBP	3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	LINC00474	Q9P2X8	69 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	CDKN2A-AS1	Q9UH64	79 aa		3.15	□□□□□ -1.91
MATR3-218	ENST00000511978	TINCR	A0A1B0GVN0	87 aa		3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	TRGC2	P03986	189 aa		3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	IGLC3	P0DOY3	106 aa		3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	KRTAP10-4	P60372	401 aa	Predicted RBP	3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	RPL37A	P61513	92 aa	Known RBP	3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	KIAA0087	Q14695	138 aa		3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	PDZD11	Q5EBL8	140 aa		3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	C2orf82	Q6UX34	121 aa		3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	CHCHD1	Q96BP2	118 aa	Known RBP	3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	PLAC8	Q9NZF1	115 aa		3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	C6orf48	Q9UBA6	75 aa		3.14	□□□□□ -1.91
MATR3-218	ENST00000511978	TRBV30	A0A0K0K1B3	111 aa		3.13	□□□□□ -1.91
MATR3-218	ENST00000511978	COLCA2	A8K830	154 aa		3.13	□□□□□ -1.91
MATR3-218	ENST00000511978	SCO1	O75880	301 aa		3.13	□□□□□ -1.91
MATR3-218	ENST00000511978	ATP5L	O75964	103 aa		3.13	□□□□□ -1.91
MATR3-218	ENST00000511978	NDUFA6	P56556	154 aa		3.13	□□□□□ -1.91
MATR3-218	ENST00000511978	CKS1B	P61024	79 aa		3.13	□□□□□ -1.91
MATR3-218	ENST00000511978	UNQ6190/PRO20217	Q6UXQ8	127 aa		3.13	□□□□□ -1.91
MATR3-218	ENST00000511978	BAGE3	Q86Y29	109 aa		3.13	□□□□□ -1.91
MATR3-218	ENST00000511978		Q8IZM0	81 aa		3.13	□□□□□ -1.91
MATR3-218	ENST00000511978	TOMM7	Q9P0U1	55 aa		3.13	□□□□□ -1.91
MATR3-218	ENST00000511978		H3BRM9	83 aa		3.12	□□□□□ -1.91
MATR3-218	ENST00000511978	HSBP1	O75506	76 aa		3.12	□□□□□ -1.91
MATR3-218	ENST00000511978	SPINK8	P0C7L1	97 aa		3.12	□□□□□ -1.91
MATR3-218	ENST00000511978	TLX1NB	P0CAT3	122 aa		3.12	□□□□□ -1.91
MATR3-218	ENST00000511978	ZNF22	P17026	224 aa	Predicted RBP	3.12	□□□□□ -1.91
MATR3-218	ENST00000511978	CXCL5	P42830	114 aa		3.12	□□□□□ -1.91
MATR3-218	ENST00000511978	IFI27L1	Q96BM0	104 aa		3.12	□□□□□ -1.91
MATR3-218	ENST00000511978	NDUFC2-KCTD14	E9PQ53	114 aa		3.11	□□□□□ -1.91
MATR3-218	ENST00000511978		F8VRH5	84 aa		3.11	□□□□□ -1.91
MATR3-218	ENST00000511978	PRR3	P79522	188 aa	Known RBP	3.11	□□□□□ -1.91
MATR3-218	ENST00000511978	C9orf116	Q5BN46	136 aa	Predicted RBP	3.11	□□□□□ -1.91
MATR3-218	ENST00000511978	C6orf226	Q5I0X4	101 aa		3.11	□□□□□ -1.91
MATR3-218	ENST00000511978	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	3.11	□□□□□ -1.91
MATR3-218	ENST00000511978	FAM19A2	Q8N3H0	131 aa		3.11	□□□□□ -1.91
MATR3-218	ENST00000511978	COX7B2	Q8TF08	81 aa		3.11	□□□□□ -1.91
MATR3-218	ENST00000511978	CHTOP	Q9Y3Y2	248 aa	Known RBP	3.11	□□□□□ -1.91
MATR3-218	ENST00000511978	TRAV12-1	A0A0B4J245	112 aa		3.1	□□□□□ -1.91
MATR3-218	ENST00000511978		A0A1W2PNN7	141 aa		3.1	□□□□□ -1.91
MATR3-218	ENST00000511978	C11orf86	A6NJI1	115 aa		3.1	□□□□□ -1.91
MATR3-218	ENST00000511978	TMEM170B	Q5T4T1	132 aa		3.1	□□□□□ -1.91
MATR3-218	ENST00000511978	SRRM2	Q9UQ35	2752 aa	Known RBP	3.1	□□□□□ -1.91
MATR3-218	ENST00000511978		H0Y8G0	127 aa		3.09	□□□□□ -1.91
MATR3-218	ENST00000511978		M0QXV9	152 aa		3.09	□□□□□ -1.91
MATR3-218	ENST00000511978	NUPR1	O60356	82 aa		3.09	□□□□□ -1.91
MATR3-218	ENST00000511978	LEPROTL1	O95214	131 aa		3.09	□□□□□ -1.91
MATR3-218	ENST00000511978	PHF5A	Q7RTV0	110 aa	Known RBP	3.09	□□□□□ -1.91
MATR3-218	ENST00000511978	XAGE1A	Q9HD64	81 aa		3.09	□□□□□ -1.91
MATR3-218	ENST00000511978	VPS13B	Q7Z7G8	4022 aa		3.09	□□□□□ -1.92
MATR3-218	ENST00000511978	TMEM223	A0PJW6	202 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HIST1H2BK	O60814	126 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HIST1H2BJ	P06899	126 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	FABP4	P15090	132 aa		3.08	□□□□□ -1.92
MATR3-218	ENST00000511978	HIST1H2BO	P23527	126 aa		3.08	□□□□□ -1.92

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