RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 RPL39P5Q59GN2 51 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 PKD1L2Q7Z442 2459 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 C20orf203Q8NBC4 194 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 CHCHD10Q8WYQ3 142 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 B9D2Q9BPU9 175 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 DPM3Q9P2X0 92 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 ASPMQ8IZT6 3477 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 CHD8Q9HCK8 2581 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGHV3OR16-13A0A075B7E8 117 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGHV3-72A0A0B4J1Y9 119 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 FAM168BA1KXE4 195 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGLV1-47P01700 117 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 KRTAP1-4P0C5Y4 121 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGHV1-8P0DP01 117 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 PRB4P10163 310 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 WT1-ASQ06250 92 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 LYPD2Q6UXB3 125 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 RPL39LQ96EH5 51 aaKnown RBP3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 DHRS4-AS1Q9P1J3 65 aa3.05□□□□□ -1.92
HMGB3P13-201ENST00000511263 LOC400499M0QZD8 3231 aa3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGHV3OR16-12A0A075B7B8 117 aa3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGKV2-29A2NJV5 120 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 MSMBP08118 114 aa3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 RPL39P62891 51 aaKnown RBP3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 HCP5Q6MZN7 132 aa3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 Q8N814 137 aa3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 Q8TAT8 98 aa3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 SMIM11BQ8TCY0 68 aa3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 ZCCHC13Q8WW36 166 aaKnown RBP3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 HIGD2AQ9BW72 106 aa3.04□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGHV3-49A0A0A0MS15 119 aa3.03□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGHV3-73A0A0B4J1V6 119 aa3.03□□□□□ -1.92
HMGB3P13-201ENST00000511263 LRCOL1A6NCL2 159 aa3.03□□□□□ -1.92
HMGB3P13-201ENST00000511263 LYNX1G3V0Z9 82 aa3.03□□□□□ -1.92
HMGB3P13-201ENST00000511263 LYNX1P0DP58 116 aa3.03□□□□□ -1.92
HMGB3P13-201ENST00000511263 NTM-AS1Q6ZSK4 140 aa3.03□□□□□ -1.92
HMGB3P13-201ENST00000511263 SND1-IT1Q9HBX3 110 aa3.03□□□□□ -1.92
HMGB3P13-201ENST00000511263 S4R3C0 116 aa3.03□□□□□ -1.92
HMGB3P13-201ENST00000511263 CELSR3Q9NYQ7 3312 aa3.03□□□□□ -1.92
HMGB3P13-201ENST00000511263 BSNQ9UPA5 3926 aa3.03□□□□□ -1.92
HMGB3P13-201ENST00000511263 PCNX1Q96RV3 2341 aa3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 DSPP15924 2871 aaKnown RBP3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGHV3-64DA0A0J9YX35 117 aa3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 ETDCA0A1B0GVM5 59 aa3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 NDUFA4O00483 81 aa3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGLV1-51P01701 117 aa3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 RNASE13Q5GAN3 156 aaKnown RBP3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 C9orf129Q5T035 196 aaKnown RBP3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 NPBQ8NG41 125 aa3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 WFDC10AQ9H1F0 79 aa3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 CADP27708 2225 aa3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 EPG5Q9HCE0 2579 aa3.02□□□□□ -1.93
HMGB3P13-201ENST00000511263 DOPEY1Q5JWR5 2465 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 FAM208BQ5VWN6 2430 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 CFAP47Q6ZTR5 3102 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 ARHGAP32A7KAX9 2087 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 A0A096LNT2 108 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 ODF3BA8MYP8 253 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGKV1-17P01599 117 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 KLK9Q2XQG4 91 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 COX7B2Q8TF08 81 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 DIDO1Q9BTC0 2240 aaKnown RBP3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 CACNA1DQ01668 2161 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 NBASA2RRP1 2371 aa3.01□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGSF10Q6WRI0 2623 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 FRYQ5TBA9 3013 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 TRGV2A0A075B6R0 118 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGHV1-3A0A0C4DH29 117 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 I3L2K1 104 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGKV4-1P06312 121 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 CCL3L1P16619 93 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 SPAG11BQ08648 103 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 ABCA4P78363 2273 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 PRRC2CQ9Y520 2896 aaKnown RBP3□□□□□ -1.93
HMGB3P13-201ENST00000511263 HIVEP3Q5T1R4 2406 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 USP24Q9UPU5 2620 aa3□□□□□ -1.93
HMGB3P13-201ENST00000511263 SPTBN1Q01082 2364 aaKnown RBP3□□□□□ -1.93
HMGB3P13-201ENST00000511263 KMT2BQ9UMN6 2715 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 ANKHD1Q8IWZ3 2542 aaKnown RBP2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 ZNF462Q96JM2 2506 aa2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 ICE1Q9Y2F5 2266 aa2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 DSCAML1Q8TD84 2053 aa2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGHV3-53P01767 116 aa2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 COX7BP24311 80 aa2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 MUC7Q8TAX7 377 aa2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 KCNQ1DNQ9H478 68 aa2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 ATMQ13315 3056 aa2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 SPTAN1Q13813 2472 aaKnown RBP2.99□□□□□ -1.93
HMGB3P13-201ENST00000511263 ZZEF1O43149 2961 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGHV3-35A0A0C4DH35 117 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 TRBV6-4A0A1B0GX49 114 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 H0Y9P7 68 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 H3BUA1 57 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGHV3-48P01763 117 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 LINC00315P59091 139 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 ROMO1P60602 79 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 CNBPP62633 177 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 874.7 ms