RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 DUSP14O95147 198 aaKnown RBP3.5□□□□□ -1.85
GYPB-212ENST00000511198 IGHV3-23P01764 117 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 LINC01620Q4KN68 170 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 TTC32Q5I0X7 151 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 CFAP161Q6P656 301 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 FAM223AQ8IWN6 122 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 TMEM263Q8WUH6 116 aaKnown RBP3.5□□□□□ -1.85
GYPB-212ENST00000511198 PTH2Q96A98 100 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 UBE2WQ96B02 151 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 RPL39LQ96EH5 51 aaKnown RBP3.5□□□□□ -1.85
GYPB-212ENST00000511198 AMELXQ99217 191 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 KIR2DL4Q99706 377 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 USH2AO75445 5202 aa3.5□□□□□ -1.85
GYPB-212ENST00000511198 TRBV27A0A0K0K1C4 114 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 TMEM223A0PJW6 202 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 A4D1N5 150 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 PANO1I0J062 215 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 M0R2P5 195 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 RS1O15537 224 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 POLR2KP53803 58 aaKnown RBP3.49□□□□□ -1.85
GYPB-212ENST00000511198 TMEM170BQ5T4T1 132 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 PRR9Q5T870 116 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 CLEC19AQ6UXS0 136 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 GPHB5Q86YW7 130 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 C14orf178Q8N769 122 aaPredicted RBP3.49□□□□□ -1.85
GYPB-212ENST00000511198 TYMSOSQ8TAI1 123 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 ODF3Q96PU9 254 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 TMEM126AQ9H061 195 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 SPANXCQ9NY87 97 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 SS18L2Q9UHA2 77 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 LINC00588Q9Y4M8 146 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 KIF25-AS1Q9Y6Z4 181 aa3.49□□□□□ -1.85
GYPB-212ENST00000511198 TRBV7-7A0A0K0K1E9 115 aa3.48□□□□□ -1.85
GYPB-212ENST00000511198 H3BUA1 57 aa3.48□□□□□ -1.85
GYPB-212ENST00000511198 NDUFA4O00483 81 aa3.48□□□□□ -1.85
GYPB-212ENST00000511198 ACYP1P07311 99 aa3.48□□□□□ -1.85
GYPB-212ENST00000511198 COX6CP09669 75 aa3.48□□□□□ -1.85
GYPB-212ENST00000511198 RNASE3P12724 160 aaKnown RBP3.48□□□□□ -1.85
GYPB-212ENST00000511198 RNASE4P34096 147 aaKnown RBP3.48□□□□□ -1.85
GYPB-212ENST00000511198 TSPEAR-AS2P59090 65 aa3.48□□□□□ -1.85
GYPB-212ENST00000511198 LINC00315P59091 139 aa3.48□□□□□ -1.85
GYPB-212ENST00000511198 KRTAP10-8P60410 259 aa3.48□□□□□ -1.85
GYPB-212ENST00000511198 IMUPQ9GZP8 106 aa3.48□□□□□ -1.85
GYPB-212ENST00000511198 TRAV2A0A0B4J234 112 aa3.47□□□□□ -1.85
GYPB-212ENST00000511198 TRAV4A0A0B4J268 109 aa3.47□□□□□ -1.85
GYPB-212ENST00000511198 TIMM17BO60830 172 aa3.47□□□□□ -1.85
GYPB-212ENST00000511198 ATP5G1P05496 136 aa3.47□□□□□ -1.85
GYPB-212ENST00000511198 MIFP14174 115 aa3.47□□□□□ -1.85
GYPB-212ENST00000511198 ZNF22P17026 224 aaPredicted RBP3.47□□□□□ -1.85
GYPB-212ENST00000511198 Q1RN00 199 aa3.47□□□□□ -1.85
GYPB-212ENST00000511198 SFTA2Q6UW10 78 aa3.47□□□□□ -1.85
GYPB-212ENST00000511198 Q6ZSA8 131 aa3.47□□□□□ -1.85
GYPB-212ENST00000511198 TMEM101Q96IK0 257 aa3.47□□□□□ -1.85
GYPB-212ENST00000511198 IGHV3-66A0A0C4DH42 116 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 A0A0J9YXY3 114 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 LST1O00453 97 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 GIG44P09565 113 aaPredicted RBP3.46□□□□□ -1.86
GYPB-212ENST00000511198 MIAQ16674 131 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 FAM159AQ6UWV7 190 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 C2orf82Q6UX34 121 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 MUSTN1Q8IVN3 82 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 COPS9Q8WXC6 57 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 USMG5Q96IX5 58 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 C9orf85Q96MD7 179 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 PPDPFQ9H3Y8 114 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 ICOSQ9Y6W8 199 aa3.46□□□□□ -1.86
GYPB-212ENST00000511198 MUC17Q685J3 4493 aa3.45□□□□□ -1.86
GYPB-212ENST00000511198 IGHV3OR16-8A0A075B7F1 116 aa3.45□□□□□ -1.86
GYPB-212ENST00000511198 TRAV25A0A0B4J276 109 aa3.45□□□□□ -1.86
GYPB-212ENST00000511198 IGHV3-35A0A0C4DH35 117 aa3.45□□□□□ -1.86
GYPB-212ENST00000511198 CCDC179H3BU77 68 aa3.45□□□□□ -1.86
GYPB-212ENST00000511198 I3L3M4 83 aa3.45□□□□□ -1.86
GYPB-212ENST00000511198 ID1P41134 155 aa3.45□□□□□ -1.86
GYPB-212ENST00000511198 RPL39P62891 51 aaKnown RBP3.45□□□□□ -1.86
GYPB-212ENST00000511198 MRPS36P82909 103 aaKnown RBP3.45□□□□□ -1.86
GYPB-212ENST00000511198 C20orf203Q8NBC4 194 aa3.45□□□□□ -1.86
GYPB-212ENST00000511198 TIMM21Q9BVV7 248 aa3.45□□□□□ -1.86
GYPB-212ENST00000511198 JPT2Q9H910 190 aa3.45□□□□□ -1.86
GYPB-212ENST00000511198 IGHV3OR16-13A0A075B7E8 117 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 IGHV3-49A0A0A0MS15 119 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 IGHV3-74A0A0B4J1X5 117 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 IGHV3-16A0A0C4DH30 117 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 IGHV1-58A0A0C4DH39 117 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 TEX49A0A1B0GTD5 131 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 K7EMT4 169 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 M0QY20 66 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 GNRH2O43555 120 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 IGHV3-30-3P0DP02 117 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 HTN3P15516 51 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 EMP1P54849 157 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 ZNF56Q15929 161 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 REG3GQ6UW15 175 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 Q6ZQT7 251 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 SCXQ7RTU7 201 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 CSNK1G2-AS1Q8NCQ2 148 aa3.44□□□□□ -1.86
GYPB-212ENST00000511198 A0A087WZ39 114 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 TINCRA0A1B0GVN0 87 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 H7C2G1 150 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 CXCL5P42830 114 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 CCL18P55774 89 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms