RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 FAM19A3Q7Z5A8 133 aa3.47□□□□□ -1.85
PROM1-211ENST00000511153 HSPG2P98160 4391 aa3.47□□□□□ -1.85
PROM1-211ENST00000511153 A0A096LNI7 61 aa3.46□□□□□ -1.85
PROM1-211ENST00000511153 NDUFA1O15239 70 aa3.46□□□□□ -1.85
PROM1-211ENST00000511153 SMR3BP02814 79 aaPredicted RBP3.46□□□□□ -1.85
PROM1-211ENST00000511153 PLNP26678 52 aa3.46□□□□□ -1.85
PROM1-211ENST00000511153 NMUP48645 174 aa3.46□□□□□ -1.85
PROM1-211ENST00000511153 FAT1Q14517 4588 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.46□□□□□ -1.86
PROM1-211ENST00000511153 FAM168BA1KXE4 195 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 C20orf202A1L168 122 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 LGALS3P17931 250 aaKnown RBP3.46□□□□□ -1.86
PROM1-211ENST00000511153 HERVK_113P61574 105 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 NPC2P61916 151 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 CNBPP62633 177 aaKnown RBP3.46□□□□□ -1.86
PROM1-211ENST00000511153 S100A12P80511 92 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 SDIM1Q6ZPB5 146 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 Q8IZM0 81 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 DAND5Q8N907 189 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 C9orf163Q8N9P6 203 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 XAGE1AQ9HD64 81 aa3.46□□□□□ -1.86
PROM1-211ENST00000511153 IGLV5-39A0A0G2JS06 123 aa3.45□□□□□ -1.86
PROM1-211ENST00000511153 SMIM13P0DJ93 91 aa3.45□□□□□ -1.86
PROM1-211ENST00000511153 LINC00158P58513 81 aa3.45□□□□□ -1.86
PROM1-211ENST00000511153 Q6ZRP5 223 aa3.45□□□□□ -1.86
PROM1-211ENST00000511153 FAM19A5Q7Z5A7 132 aaPredicted RBP3.45□□□□□ -1.86
PROM1-211ENST00000511153 C2orf48Q96LS8 159 aa3.45□□□□□ -1.86
PROM1-211ENST00000511153 NDUFA12Q9UI09 145 aa3.45□□□□□ -1.86
PROM1-211ENST00000511153 LOC107984640A0A0U1RRK4 108 aa3.44□□□□□ -1.86
PROM1-211ENST00000511153 J3QQQ9 107 aa3.44□□□□□ -1.86
PROM1-211ENST00000511153 LEPROTO15243 131 aa3.44□□□□□ -1.86
PROM1-211ENST00000511153 MEIG1Q5JSS6 88 aa3.44□□□□□ -1.86
PROM1-211ENST00000511153 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
PROM1-211ENST00000511153 PCP2Q8IVA1 136 aa3.44□□□□□ -1.86
PROM1-211ENST00000511153 LINC01561Q8N1V8 128 aa3.44□□□□□ -1.86
PROM1-211ENST00000511153 PLEKHB2Q96CS7 222 aa3.44□□□□□ -1.86
PROM1-211ENST00000511153 C12orf57Q99622 126 aa3.44□□□□□ -1.86
PROM1-211ENST00000511153 PAM16Q9Y3D7 125 aa3.44□□□□□ -1.86
PROM1-211ENST00000511153 A0A087WYN8 130 aa3.43□□□□□ -1.86
PROM1-211ENST00000511153 A0A1W2PNN7 141 aa3.43□□□□□ -1.86
PROM1-211ENST00000511153 PCP4L1A6NKN8 68 aa3.43□□□□□ -1.86
PROM1-211ENST00000511153 ZNF815PA8K554 130 aa3.43□□□□□ -1.86
PROM1-211ENST00000511153 E9PLD3 99 aa3.43□□□□□ -1.86
PROM1-211ENST00000511153 SMIM6P0DI80 62 aa3.43□□□□□ -1.86
PROM1-211ENST00000511153 XGP55808 180 aa3.43□□□□□ -1.86
PROM1-211ENST00000511153 SCXQ7RTU7 201 aa3.43□□□□□ -1.86
PROM1-211ENST00000511153 ERG28Q9UKR5 140 aa3.43□□□□□ -1.86
PROM1-211ENST00000511153 UBE2V1Q13404 147 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 PYY3Q5JQD4 70 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 C9orf129Q5T035 196 aaKnown RBP3.42□□□□□ -1.86
PROM1-211ENST00000511153 PHF5AQ7RTV0 110 aaKnown RBP3.42□□□□□ -1.86
PROM1-211ENST00000511153 CIRBP-AS1Q8TBR5 109 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 SPACA4Q8TDM5 124 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 C14orf144Q96I85 54 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 TRBV30A0A0K0K1B3 111 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 MYMXA0A1B0GTQ4 84 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 NDUFC2-KCTD14E9PQ53 114 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 CXCL5P42830 114 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 PRR3P79522 188 aaKnown RBP3.42□□□□□ -1.86
PROM1-211ENST00000511153 MIR7-3HGQ8N6C7 128 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 Q8NDZ9 215 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 SND1-IT1Q9HBX3 110 aa3.42□□□□□ -1.86
PROM1-211ENST00000511153 A0A0J9YXY3 114 aa3.41□□□□□ -1.86
PROM1-211ENST00000511153 NCR3O14931 201 aa3.41□□□□□ -1.86
PROM1-211ENST00000511153 JOSD1Q15040 202 aaPredicted RBP3.41□□□□□ -1.86
PROM1-211ENST00000511153 SPATA45Q537H7 98 aa3.41□□□□□ -1.86
PROM1-211ENST00000511153 ADAMTSL4-AS1Q5T5F5 129 aa3.41□□□□□ -1.86
PROM1-211ENST00000511153 SCGB1D4Q6XE38 83 aa3.41□□□□□ -1.86
PROM1-211ENST00000511153 KRTAP7-1Q8IUC3 87 aa3.41□□□□□ -1.86
PROM1-211ENST00000511153 RPL37AP8A6NKH3 93 aa3.4□□□□□ -1.87
PROM1-211ENST00000511153 Q6ZSA8 131 aa3.4□□□□□ -1.87
PROM1-211ENST00000511153 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
PROM1-211ENST00000511153 VAMP8Q9BV40 100 aa3.4□□□□□ -1.87
PROM1-211ENST00000511153 PRO1933Q9H354 126 aa3.4□□□□□ -1.87
PROM1-211ENST00000511153 M0QXV9 152 aa3.39□□□□□ -1.87
PROM1-211ENST00000511153 GAGE2AQ6NT46 116 aa3.39□□□□□ -1.87
PROM1-211ENST00000511153 SOSTDC1Q6X4U4 206 aa3.39□□□□□ -1.87
PROM1-211ENST00000511153 BOD1L2Q8IYS8 172 aa3.39□□□□□ -1.87
PROM1-211ENST00000511153 LINC00587B1AMM8 73 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 TLX1NBP0CAT3 122 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 HERV-K104P63124 156 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 UBE2BP63146 152 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 KRTAP15-1Q3LI76 137 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 C22orf24Q9Y442 160 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 VPS13BQ7Z7G8 4022 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 IGKV2-28A0A075B6P5 120 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 IGKV2D-28P01615 120 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 CIRBPQ14011 172 aaKnown RBP3.38□□□□□ -1.87
PROM1-211ENST00000511153 Q5VSD8 79 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 NKAPP1Q8N9T2 125 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 LITAFQ99732 161 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 PLAC8Q9NZF1 115 aa3.38□□□□□ -1.87
PROM1-211ENST00000511153 CDK2AP2O75956 126 aa3.37□□□□□ -1.87
PROM1-211ENST00000511153 COX8AP10176 69 aa3.37□□□□□ -1.87
PROM1-211ENST00000511153 C7orf33Q8WU49 177 aa3.37□□□□□ -1.87
PROM1-211ENST00000511153 LINC00167Q96N53 147 aa3.37□□□□□ -1.87
PROM1-211ENST00000511153 MIEN1Q9BRT3 115 aa3.37□□□□□ -1.87
PROM1-211ENST00000511153 TMEM238C9JI98 176 aa3.36□□□□□ -1.87
PROM1-211ENST00000511153 RPL37AP61513 92 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms