RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 C20orf197Q8N268 126 aa6.54□□□□□ -1.36
USP53-207ENST00000510852 TRAV12-3A0A0B4J271 114 aa6.54□□□□□ -1.36
USP53-207ENST00000510852 TRAV21A0A0B4J279 112 aa6.54□□□□□ -1.36
USP53-207ENST00000510852 GIG44P09565 113 aaPredicted RBP6.54□□□□□ -1.36
USP53-207ENST00000510852 SPANXN1Q5VSR9 72 aa6.54□□□□□ -1.36
USP53-207ENST00000510852 ZNF575Q86XF7 245 aa6.54□□□□□ -1.36
USP53-207ENST00000510852 IGLV4-3A0A075B6K6 122 aa6.52□□□□□ -1.36
USP53-207ENST00000510852 PRB2P02812 416 aaPredicted RBP6.52□□□□□ -1.36
USP53-207ENST00000510852 V9GYV3 84 aa6.52□□□□□ -1.36
USP53-207ENST00000510852 MUC4Q99102 2169 aa6.52□□□□□ -1.37
USP53-207ENST00000510852 INSP01308 110 aa6.52□□□□□ -1.37
USP53-207ENST00000510852 C20orf203Q8NBC4 194 aa6.52□□□□□ -1.37
USP53-207ENST00000510852 CAMK2N2Q96S95 79 aa6.52□□□□□ -1.37
USP53-207ENST00000510852 RPP21Q9H633 154 aaKnown RBP6.52□□□□□ -1.37
USP53-207ENST00000510852 A0A087X002 238 aa6.51□□□□□ -1.37
USP53-207ENST00000510852 A6NED7 52 aa6.51□□□□□ -1.37
USP53-207ENST00000510852 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
USP53-207ENST00000510852 RNASE13Q5GAN3 156 aaKnown RBP6.51□□□□□ -1.37
USP53-207ENST00000510852 C7orf33Q8WU49 177 aa6.51□□□□□ -1.37
USP53-207ENST00000510852 TEX49A0A1B0GTD5 131 aa6.5□□□□□ -1.37
USP53-207ENST00000510852 A8MU10 97 aa6.5□□□□□ -1.37
USP53-207ENST00000510852 IGLV5-39A0A0G2JS06 123 aa6.5□□□□□ -1.37
USP53-207ENST00000510852 BCE1O60756 84 aa6.5□□□□□ -1.37
USP53-207ENST00000510852 IGHV3-30-3P0DP02 117 aa6.5□□□□□ -1.37
USP53-207ENST00000510852 ZNF22P17026 224 aaPredicted RBP6.5□□□□□ -1.37
USP53-207ENST00000510852 C10orf25Q5T742 122 aa6.5□□□□□ -1.37
USP53-207ENST00000510852 WWC2-AS2Q96NR7 200 aa6.5□□□□□ -1.37
USP53-207ENST00000510852 A8MWP4 228 aa6.49□□□□□ -1.37
USP53-207ENST00000510852 K7EIL1 84 aa6.49□□□□□ -1.37
USP53-207ENST00000510852 RPL28P46779 137 aaKnown RBP6.49□□□□□ -1.37
USP53-207ENST00000510852 IGLV8-61A0A075B6I0 122 aa6.48□□□□□ -1.37
USP53-207ENST00000510852 F8WEM9 126 aa6.48□□□□□ -1.37
USP53-207ENST00000510852 HTN1P15515 57 aa6.48□□□□□ -1.37
USP53-207ENST00000510852 C1orf134Q5TEV5 83 aa6.48□□□□□ -1.37
USP53-207ENST00000510852 TIMM21Q9BVV7 248 aa6.48□□□□□ -1.37
USP53-207ENST00000510852 SMIM27A0A1W2PRY6 76 aa6.48□□□□□ -1.37
USP53-207ENST00000510852 ROMO1P60602 79 aa6.48□□□□□ -1.37
USP53-207ENST00000510852 A0A0B4J2C4 111 aa6.47□□□□□ -1.37
USP53-207ENST00000510852 DEFB135Q30KP9 77 aa6.47□□□□□ -1.37
USP53-207ENST00000510852 LINC00467Q9BRT7 94 aa6.47□□□□□ -1.37
USP53-207ENST00000510852 GFRA4Q9GZZ7 299 aa6.47□□□□□ -1.37
USP53-207ENST00000510852 DNAH9Q9NYC9 4486 aa6.47□□□□□ -1.37
USP53-207ENST00000510852 NBEAL2Q6ZNJ1 2754 aa6.47□□□□□ -1.37
USP53-207ENST00000510852 TRAV22A0A0B4J277 110 aa6.47□□□□□ -1.37
USP53-207ENST00000510852 HIGD1CA8MV81 97 aa6.47□□□□□ -1.37
USP53-207ENST00000510852 C9orf116Q5BN46 136 aaPredicted RBP6.47□□□□□ -1.37
USP53-207ENST00000510852 SMCR5Q8TEV8 140 aa6.47□□□□□ -1.37
USP53-207ENST00000510852 HUWE1Q7Z6Z7 4374 aaKnown RBP6.47□□□□□ -1.37
USP53-207ENST00000510852 ARMS2P0C7Q2 107 aa6.46□□□□□ -1.38
USP53-207ENST00000510852 RNASE3P12724 160 aaKnown RBP6.46□□□□□ -1.38
USP53-207ENST00000510852 TIMM8BQ9Y5J9 83 aaPredicted RBP6.46□□□□□ -1.38
USP53-207ENST00000510852 LEPROTL1O95214 131 aa6.45□□□□□ -1.38
USP53-207ENST00000510852 LYZL1Q6UWQ5 148 aa6.45□□□□□ -1.38
USP53-207ENST00000510852 Q8NDZ9 215 aa6.45□□□□□ -1.38
USP53-207ENST00000510852 SPINK4O60575 86 aa6.45□□□□□ -1.38
USP53-207ENST00000510852 IFI27L1Q96BM0 104 aa6.45□□□□□ -1.38
USP53-207ENST00000510852 MIAQ16674 131 aa6.44□□□□□ -1.38
USP53-207ENST00000510852 PRO1854Q9UHT4 67 aa6.44□□□□□ -1.38
USP53-207ENST00000510852 TRBV10-2A0A0K0K1G8 114 aa6.44□□□□□ -1.38
USP53-207ENST00000510852 hDV103S1A0JD37 113 aa6.44□□□□□ -1.38
USP53-207ENST00000510852 PRKDCP78527 4128 aaKnown RBP6.44□□□□□ -1.38
USP53-207ENST00000510852 TMEM263Q8WUH6 116 aaKnown RBP6.44□□□□□ -1.38
USP53-207ENST00000510852 CRPP02741 224 aa6.43□□□□□ -1.38
USP53-207ENST00000510852 MIFP14174 115 aa6.43□□□□□ -1.38
USP53-207ENST00000510852 C16orf74Q96GX8 76 aa6.43□□□□□ -1.38
USP53-207ENST00000510852 A0A1B0GUT8 65 aa6.42□□□□□ -1.38
USP53-207ENST00000510852 LECT2O14960 151 aa6.42□□□□□ -1.38
USP53-207ENST00000510852 LINC01547P58512 204 aaPredicted RBP6.42□□□□□ -1.38
USP53-207ENST00000510852 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
USP53-207ENST00000510852 CNFNQ9BYD5 112 aa6.42□□□□□ -1.38
USP53-207ENST00000510852 CYP4F30PQ9H0H9 118 aa6.42□□□□□ -1.38
USP53-207ENST00000510852 K7ERS5 55 aa6.42□□□□□ -1.38
USP53-207ENST00000510852 CFC1BP0CG36 223 aa6.42□□□□□ -1.38
USP53-207ENST00000510852 RPL36AP83881 106 aaKnown RBP6.42□□□□□ -1.38
USP53-207ENST00000510852 Q5VV11 94 aa6.41□□□□□ -1.38
USP53-207ENST00000510852 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
USP53-207ENST00000510852 MEGF8Q7Z7M0 2845 aa6.41□□□□□ -1.38
USP53-207ENST00000510852 SDHAF1A6NFY7 115 aa6.41□□□□□ -1.38
USP53-207ENST00000510852 SMIM1B2RUZ4 78 aa6.41□□□□□ -1.38
USP53-207ENST00000510852 C2orf66Q6UXQ4 117 aa6.41□□□□□ -1.38
USP53-207ENST00000510852 NOP10Q9NPE3 64 aaKnown RBP6.41□□□□□ -1.38
USP53-207ENST00000510852 Q8NAQ8 132 aa6.4□□□□□ -1.38
USP53-207ENST00000510852 TRBV25-1A0A075B6N4 114 aa6.4□□□□□ -1.39
USP53-207ENST00000510852 TRAV7A0A075B6U4 112 aa6.4□□□□□ -1.39
USP53-207ENST00000510852 TMEM223A0PJW6 202 aa6.4□□□□□ -1.39
USP53-207ENST00000510852 DEFB4AO15263 64 aa6.4□□□□□ -1.39
USP53-207ENST00000510852 Q6JHZ5 121 aa6.39□□□□□ -1.39
USP53-207ENST00000510852 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.39□□□□□ -1.39
USP53-207ENST00000510852 TRGV1A0A0A0MS02 117 aa6.39□□□□□ -1.39
USP53-207ENST00000510852 IFI27P40305 119 aaPredicted RBP6.39□□□□□ -1.39
USP53-207ENST00000510852 Q6ZTI0 123 aa6.39□□□□□ -1.39
USP53-207ENST00000510852 TRBV7-3A0A075B6L6 115 aa6.38□□□□□ -1.39
USP53-207ENST00000510852 MOBPQ13875 183 aa6.38□□□□□ -1.39
USP53-207ENST00000510852 U3KQK5 164 aa6.38□□□□□ -1.39
USP53-207ENST00000510852 LINC01549A6NIU2 74 aa6.37□□□□□ -1.39
USP53-207ENST00000510852 C14orf178Q8N769 122 aaPredicted RBP6.37□□□□□ -1.39
USP53-207ENST00000510852 TENM3Q9P273 2699 aa6.37□□□□□ -1.39
USP53-207ENST00000510852 TRBV10-3A0A0K0K1G6 114 aa6.37□□□□□ -1.39
USP53-207ENST00000510852 CIRBP-AS1Q8TBR5 109 aa6.37□□□□□ -1.39
USP53-207ENST00000510852 UBE2D4Q9Y2X8 147 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms