RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 TP73-AS1Q9UF72 201 aa8.19□□□□□ -1.1
SNF8-206ENST00000509989 DPM2O94777 84 aa8.18□□□□□ -1.1
SNF8-206ENST00000509989 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
SNF8-206ENST00000509989 LINC00158P58513 81 aa8.18□□□□□ -1.1
SNF8-206ENST00000509989 IGKV2-28A0A075B6P5 120 aa8.17□□□□□ -1.1
SNF8-206ENST00000509989 H0Y9J4 135 aa8.17□□□□□ -1.1
SNF8-206ENST00000509989 SYS1-DBNDD2H3BUS1 97 aa8.17□□□□□ -1.1
SNF8-206ENST00000509989 LEPROTO15243 131 aa8.17□□□□□ -1.1
SNF8-206ENST00000509989 IGKV2D-28P01615 120 aa8.17□□□□□ -1.1
SNF8-206ENST00000509989 IGKCP01834 107 aa8.17□□□□□ -1.1
SNF8-206ENST00000509989 LBHQ53QV2 105 aaPredicted RBP8.17□□□□□ -1.1
SNF8-206ENST00000509989 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
SNF8-206ENST00000509989 NDUFA12Q9UI09 145 aa8.17□□□□□ -1.1
SNF8-206ENST00000509989 COX17Q14061 63 aa8.16□□□□□ -1.1
SNF8-206ENST00000509989 PRR26Q8N8Z3 221 aa8.16□□□□□ -1.1
SNF8-206ENST00000509989 DAND5Q8N907 189 aa8.16□□□□□ -1.1
SNF8-206ENST00000509989 MAP1LC3CQ9BXW4 147 aa8.16□□□□□ -1.1
SNF8-206ENST00000509989 TMEM238C9JI98 176 aa8.15□□□□□ -1.1
SNF8-206ENST00000509989 PLNP26678 52 aa8.15□□□□□ -1.1
SNF8-206ENST00000509989 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
SNF8-206ENST00000509989 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.1
SNF8-206ENST00000509989 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
SNF8-206ENST00000509989 J3QQQ9 107 aa8.14□□□□□ -1.11
SNF8-206ENST00000509989 C3orf79P0CE67 100 aa8.14□□□□□ -1.11
SNF8-206ENST00000509989 MEIG1Q5JSS6 88 aa8.14□□□□□ -1.11
SNF8-206ENST00000509989 DIRC1Q969H9 104 aa8.14□□□□□ -1.11
SNF8-206ENST00000509989 IGLV1-50A0A075B6I6 118 aa8.13□□□□□ -1.11
SNF8-206ENST00000509989 ZNF861PO60384 105 aa8.13□□□□□ -1.11
SNF8-206ENST00000509989 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
SNF8-206ENST00000509989 BCE1O60756 84 aa8.12□□□□□ -1.11
SNF8-206ENST00000509989 LINC01545Q5VT33 79 aa8.12□□□□□ -1.11
SNF8-206ENST00000509989 KRTAP13-1Q8IUC0 172 aa8.12□□□□□ -1.11
SNF8-206ENST00000509989 PLEKHB2Q96CS7 222 aa8.12□□□□□ -1.11
SNF8-206ENST00000509989 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
SNF8-206ENST00000509989 IGKV2D-26A0A0A0MRZ7 120 aa8.11□□□□□ -1.11
SNF8-206ENST00000509989 MYMXA0A1B0GTQ4 84 aa8.11□□□□□ -1.11
SNF8-206ENST00000509989 NCR3O14931 201 aa8.11□□□□□ -1.11
SNF8-206ENST00000509989 SFTA2Q6UW10 78 aa8.11□□□□□ -1.11
SNF8-206ENST00000509989 M0R378 163 aa8.1□□□□□ -1.11
SNF8-206ENST00000509989 HERV-K104P63124 156 aa8.1□□□□□ -1.11
SNF8-206ENST00000509989 PRLHP81277 87 aa8.1□□□□□ -1.11
SNF8-206ENST00000509989 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
SNF8-206ENST00000509989 BOD1L2Q8IYS8 172 aa8.1□□□□□ -1.11
SNF8-206ENST00000509989 ANAPC11Q9NYG5 84 aa8.1□□□□□ -1.11
SNF8-206ENST00000509989 E9PLD3 99 aa8.09□□□□□ -1.11
SNF8-206ENST00000509989 LGALS3P17931 250 aaKnown RBP8.09□□□□□ -1.11
SNF8-206ENST00000509989 KRTDAPP60985 99 aa8.09□□□□□ -1.11
SNF8-206ENST00000509989 HERVK_113P61574 105 aa8.09□□□□□ -1.11
SNF8-206ENST00000509989 RPL24P83731 157 aaKnown RBP8.09□□□□□ -1.11
SNF8-206ENST00000509989 PET117Q6UWS5 81 aa8.09□□□□□ -1.11
SNF8-206ENST00000509989 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
SNF8-206ENST00000509989 TMEM126AQ9H061 195 aa8.09□□□□□ -1.11
SNF8-206ENST00000509989 A0A0J9YXY3 114 aa8.08□□□□□ -1.12
SNF8-206ENST00000509989 NPC2P61916 151 aa8.08□□□□□ -1.12
SNF8-206ENST00000509989 UBR4Q5T4S7 5183 aa8.07□□□□□ -1.12
SNF8-206ENST00000509989 ATOH7Q8N100 152 aa8.07□□□□□ -1.12
SNF8-206ENST00000509989 A0A087X002 238 aa8.06□□□□□ -1.12
SNF8-206ENST00000509989 FAM19A1Q7Z5A9 133 aa8.06□□□□□ -1.12
SNF8-206ENST00000509989 LITAFQ99732 161 aa8.06□□□□□ -1.12
SNF8-206ENST00000509989 RPL28P46779 137 aaKnown RBP8.05□□□□□ -1.12
SNF8-206ENST00000509989 UBE2AP49459 152 aa8.05□□□□□ -1.12
SNF8-206ENST00000509989 ANKRD39Q53RE8 183 aa8.05□□□□□ -1.12
SNF8-206ENST00000509989 TRBV10-3A0A0K0K1G6 114 aa8.04□□□□□ -1.12
SNF8-206ENST00000509989 NMUP48645 174 aa8.04□□□□□ -1.12
SNF8-206ENST00000509989 HIST3H2BBQ8N257 126 aa8.04□□□□□ -1.12
SNF8-206ENST00000509989 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
SNF8-206ENST00000509989 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
SNF8-206ENST00000509989 KRTAP13-2Q52LG2 175 aa8.02□□□□□ -1.13
SNF8-206ENST00000509989 HIST1H2BLQ99880 126 aa8.02□□□□□ -1.13
SNF8-206ENST00000509989 LRP2P98164 4655 aa8.02□□□□□ -1.13
SNF8-206ENST00000509989 KRTAP4-16G5E9R7 235 aaPredicted RBP8.01□□□□□ -1.13
SNF8-206ENST00000509989 LPAP08519 4548 aa8.01□□□□□ -1.13
SNF8-206ENST00000509989 ZNF815PA8K554 130 aa8□□□□□ -1.13
SNF8-206ENST00000509989 LINC00587B1AMM8 73 aa8□□□□□ -1.13
SNF8-206ENST00000509989 SPRR1AP35321 89 aa8□□□□□ -1.13
SNF8-206ENST00000509989 HIGD2AQ9BW72 106 aa7.99□□□□□ -1.13
SNF8-206ENST00000509989 KCNQ1DNQ9H478 68 aa7.99□□□□□ -1.13
SNF8-206ENST00000509989 PRYO14603 147 aa7.98□□□□□ -1.13
SNF8-206ENST00000509989 PCP2Q8IVA1 136 aa7.98□□□□□ -1.13
SNF8-206ENST00000509989 SNRPEP62304 92 aaKnown RBP7.97□□□□□ -1.13
SNF8-206ENST00000509989 LINC00308Q8TCZ7 52 aa7.97□□□□□ -1.13
SNF8-206ENST00000509989 DDTP30046 118 aa7.96□□□□□ -1.14
SNF8-206ENST00000509989 SMCR5Q8TEV8 140 aa7.96□□□□□ -1.14
SNF8-206ENST00000509989 TRBV10-2A0A0K0K1G8 114 aa7.95□□□□□ -1.14
SNF8-206ENST00000509989 ERC2-IT1O76042 136 aa7.95□□□□□ -1.14
SNF8-206ENST00000509989 NDUFC2O95298 119 aa7.95□□□□□ -1.14
SNF8-206ENST00000509989 IGLV6-57P01721 117 aa7.95□□□□□ -1.14
SNF8-206ENST00000509989 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
SNF8-206ENST00000509989 SPANXB1Q9NS25 103 aaPredicted RBP7.95□□□□□ -1.14
SNF8-206ENST00000509989 C20orf202A1L168 122 aa7.94□□□□□ -1.14
SNF8-206ENST00000509989 B5MCH6 92 aa7.94□□□□□ -1.14
SNF8-206ENST00000509989 TIMM17BO60830 172 aa7.94□□□□□ -1.14
SNF8-206ENST00000509989 TSPAN13O95857 204 aa7.94□□□□□ -1.14
SNF8-206ENST00000509989 CRYGAP11844 174 aa7.94□□□□□ -1.14
SNF8-206ENST00000509989 LINC00337Q8N6G1 96 aa7.94□□□□□ -1.14
SNF8-206ENST00000509989 MIEN1Q9BRT3 115 aa7.94□□□□□ -1.14
SNF8-206ENST00000509989 S100A6P06703 90 aa7.93□□□□□ -1.14
SNF8-206ENST00000509989 S100A2P29034 98 aa7.93□□□□□ -1.14
SNF8-206ENST00000509989 RPL13AP40429 203 aaKnown RBP7.93□□□□□ -1.14
SNF8-206ENST00000509989 SPRR4Q96PI1 79 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms