RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 PTPRZ1P23471 2315 aaPredicted RBP2.68□□□□□ -1.98
SPARCL1-206ENST00000509407 TRGV4A0A0C4DH28 118 aa2.68□□□□□ -1.98
SPARCL1-206ENST00000509407 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
SPARCL1-206ENST00000509407 ARFGEF3Q5TH69 2177 aa2.68□□□□□ -1.98
SPARCL1-206ENST00000509407 ZNF318Q5VUA4 2279 aa2.68□□□□□ -1.98
SPARCL1-206ENST00000509407 C5orf42Q9H799 3197 aa2.68□□□□□ -1.98
SPARCL1-206ENST00000509407 REV3LO60673 3130 aa2.68□□□□□ -1.98
SPARCL1-206ENST00000509407 INTS1Q8N201 2190 aaKnown RBP2.67□□□□□ -1.98
SPARCL1-206ENST00000509407 SPTBN5Q9NRC6 3674 aaKnown RBP2.67□□□□□ -1.98
SPARCL1-206ENST00000509407 IGKV2-29A2NJV5 120 aaPredicted RBP2.67□□□□□ -1.98
SPARCL1-206ENST00000509407 IGLV3-19P01714 112 aa2.67□□□□□ -1.98
SPARCL1-206ENST00000509407 DEFB112Q30KQ8 113 aa2.67□□□□□ -1.98
SPARCL1-206ENST00000509407 C5orf56Q8N8D9 126 aa2.67□□□□□ -1.98
SPARCL1-206ENST00000509407 SPACA4Q8TDM5 124 aa2.67□□□□□ -1.98
SPARCL1-206ENST00000509407 ZFHX2Q9C0A1 2572 aaPredicted RBP2.67□□□□□ -1.98
SPARCL1-206ENST00000509407 FAM186AA6NE01 2351 aa2.67□□□□□ -1.98
SPARCL1-206ENST00000509407 IGLV4-60A0A075B6I1 120 aa2.66□□□□□ -1.98
SPARCL1-206ENST00000509407 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.66□□□□□ -1.98
SPARCL1-206ENST00000509407 CACNA1HO95180 2353 aa2.66□□□□□ -1.98
SPARCL1-206ENST00000509407 UNC13CQ8NB66 2214 aa2.65□□□□□ -1.98
SPARCL1-206ENST00000509407 TRGV1A0A0A0MS02 117 aa2.65□□□□□ -1.99
SPARCL1-206ENST00000509407 LINC01546A6NGU7 62 aa2.65□□□□□ -1.99
SPARCL1-206ENST00000509407 IGKV3-15P01624 115 aa2.65□□□□□ -1.99
SPARCL1-206ENST00000509407 DSCR10P59022 87 aa2.65□□□□□ -1.99
SPARCL1-206ENST00000509407 RIF1Q5UIP0 2472 aaKnown RBP2.65□□□□□ -1.99
SPARCL1-206ENST00000509407 F5P12259 2224 aa2.65□□□□□ -1.99
SPARCL1-206ENST00000509407 MUC3AQ02505 3323 aa2.65□□□□□ -1.99
SPARCL1-206ENST00000509407 TRIOO75962 3097 aa2.65□□□□□ -1.99
SPARCL1-206ENST00000509407 LOC110117498A0A087WWA1 95 aa2.64□□□□□ -1.99
SPARCL1-206ENST00000509407 M0R1W7 72 aa2.64□□□□□ -1.99
SPARCL1-206ENST00000509407 IGKV4-1P06312 121 aa2.64□□□□□ -1.99
SPARCL1-206ENST00000509407 FXYD4P59646 89 aa2.64□□□□□ -1.99
SPARCL1-206ENST00000509407 DEFB119Q8N690 84 aa2.64□□□□□ -1.99
SPARCL1-206ENST00000509407 DEFB124Q8NES8 71 aa2.64□□□□□ -1.99
SPARCL1-206ENST00000509407 Q96NJ1 140 aa2.64□□□□□ -1.99
SPARCL1-206ENST00000509407 ABCA4P78363 2273 aa2.64□□□□□ -1.99
SPARCL1-206ENST00000509407 WDFY4Q6ZS81 3184 aa2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 IGIPA6NJ69 53 aa2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 I3L3M4 83 aa2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 INE1O15225 51 aa2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 COX6B1P14854 86 aa2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 SPINK14Q6IE38 97 aa2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 DEFB106AQ8N104 65 aa2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 Q8N9L7 120 aa2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 ZNF625Q96I27 306 aaPredicted RBP2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 LINC00472Q9H8W2 130 aa2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 EP300Q09472 2414 aaPredicted RBP2.63□□□□□ -1.99
SPARCL1-206ENST00000509407 DOCK10Q96BY6 2186 aa2.62□□□□□ -1.99
SPARCL1-206ENST00000509407 TRGV2A0A075B6R0 118 aa2.62□□□□□ -1.99
SPARCL1-206ENST00000509407 IGKV2D-24A0A075B6R9 120 aa2.62□□□□□ -1.99
SPARCL1-206ENST00000509407 H3BRN7 92 aa2.62□□□□□ -1.99
SPARCL1-206ENST00000509407 NDUFA4O00483 81 aa2.62□□□□□ -1.99
SPARCL1-206ENST00000509407 ARL14EPLP0DKL9 152 aa2.62□□□□□ -1.99
SPARCL1-206ENST00000509407 ACYP2P14621 99 aa2.62□□□□□ -1.99
SPARCL1-206ENST00000509407 DEFB114Q30KQ6 69 aa2.62□□□□□ -1.99
SPARCL1-206ENST00000509407 LINC00304Q8N9R0 145 aa2.62□□□□□ -1.99
SPARCL1-206ENST00000509407 M0R2N4 97 aa2.61□□□□□ -1.99
SPARCL1-206ENST00000509407 SPINK4O60575 86 aa2.61□□□□□ -1.99
SPARCL1-206ENST00000509407 IGLV6-57P01721 117 aa2.61□□□□□ -1.99
SPARCL1-206ENST00000509407 TIMM8BQ9Y5J9 83 aaPredicted RBP2.61□□□□□ -1.99
SPARCL1-206ENST00000509407 SPTBN4Q9H254 2564 aa2.61□□□□□ -1.99
SPARCL1-206ENST00000509407 COL4A2P08572 1712 aa2.61□□□□□ -1.99
SPARCL1-206ENST00000509407 GVINP1Q7Z2Y8 2422 aa2.61□□□□□ -1.99
SPARCL1-206ENST00000509407 SDK1Q7Z5N4 2213 aa2.61□□□□□ -1.99
SPARCL1-206ENST00000509407 CFAP54Q96N23 3096 aa2.6□□□□□ -1.99
SPARCL1-206ENST00000509407 A0A1B0GU69 56 aa2.6□□□□□ -1.99
SPARCL1-206ENST00000509407 FXYD6P3P58550 94 aa2.6□□□□□ -1.99
SPARCL1-206ENST00000509407 COA5Q86WW8 74 aa2.6□□□□□ -1.99
SPARCL1-206ENST00000509407 KRTAP11-1Q8IUC1 163 aa2.6□□□□□ -1.99
SPARCL1-206ENST00000509407 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
SPARCL1-206ENST00000509407 OTOGLQ3ZCN5 2332 aa2.6□□□□□ -1.99
SPARCL1-206ENST00000509407 WDR87Q6ZQQ6 2873 aa2.6□□□□□ -1.99
SPARCL1-206ENST00000509407 VPS13AQ96RL7 3174 aa2.59□□□□□ -1.99
SPARCL1-206ENST00000509407 LINC00959A0A1B0GUT2 108 aa2.59□□□□□ -1.99
SPARCL1-206ENST00000509407 LINC00315P59091 139 aa2.59□□□□□ -1.99
SPARCL1-206ENST00000509407 ZNF292O60281 2723 aa2.59□□□□□ -2
SPARCL1-206ENST00000509407 CEP250Q9BV73 2442 aa2.59□□□□□ -2
SPARCL1-206ENST00000509407 USP34Q70CQ2 3546 aa2.59□□□□□ -2
SPARCL1-206ENST00000509407 FRYLO94915 3013 aa2.58□□□□□ -2
SPARCL1-206ENST00000509407 ADAMTS9Q9P2N4 1935 aa2.58□□□□□ -2
SPARCL1-206ENST00000509407 CNOT1A5YKK6 2376 aaKnown RBP2.58□□□□□ -2
SPARCL1-206ENST00000509407 H0YGX0 51 aa2.58□□□□□ -2
SPARCL1-206ENST00000509407 DEFB133Q30KQ1 61 aa2.58□□□□□ -2
SPARCL1-206ENST00000509407 CACNA1BQ00975 2339 aa2.58□□□□□ -2
SPARCL1-206ENST00000509407 DMXL1Q9Y485 3027 aa2.57□□□□□ -2
SPARCL1-206ENST00000509407 SPTY2D1-AS1A0A0U1RR47 76 aa2.57□□□□□ -2
SPARCL1-206ENST00000509407 COX7BP24311 80 aa2.57□□□□□ -2
SPARCL1-206ENST00000509407 HAMPP81172 84 aa2.57□□□□□ -2
SPARCL1-206ENST00000509407 CACNA1EQ15878 2313 aa2.57□□□□□ -2
SPARCL1-206ENST00000509407 SPTBN2O15020 2390 aa2.57□□□□□ -2
SPARCL1-206ENST00000509407 TPRP12270 2363 aaKnown RBP2.57□□□□□ -2
SPARCL1-206ENST00000509407 ACACBO00763 2458 aa2.57□□□□□ -2
SPARCL1-206ENST00000509407 CACNA1AO00555 2505 aa2.57□□□□□ -2
SPARCL1-206ENST00000509407 ASCC3Q8N3C0 2202 aaKnown RBP2.56□□□□□ -2
SPARCL1-206ENST00000509407 GPR179Q6PRD1 2367 aa2.56□□□□□ -2
SPARCL1-206ENST00000509407 ETDCA0A1B0GVM5 59 aa2.56□□□□□ -2
SPARCL1-206ENST00000509407 NCR3O14931 201 aa2.56□□□□□ -2
SPARCL1-206ENST00000509407 RPL38P63173 70 aaKnown RBP2.56□□□□□ -2
SPARCL1-206ENST00000509407 KRTAP13-3Q3SY46 172 aa2.56□□□□□ -2
SPARCL1-206ENST00000509407 LCE3AQ5TA76 89 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms