RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 KRTAP13-2Q52LG2 175 aa5.81□□□□□ -1.48
SH3D21-206ENST00000508854 PDZD11Q5EBL8 140 aa5.81□□□□□ -1.48
SH3D21-206ENST00000508854 SFTA2Q6UW10 78 aa5.81□□□□□ -1.48
SH3D21-206ENST00000508854 KRTAP13-1Q8IUC0 172 aa5.81□□□□□ -1.48
SH3D21-206ENST00000508854 RETNLBQ9BQ08 111 aa5.81□□□□□ -1.48
SH3D21-206ENST00000508854 ANAPC11Q9NYG5 84 aa5.81□□□□□ -1.48
SH3D21-206ENST00000508854 GAGE10A6NGK3 116 aa5.8□□□□□ -1.48
SH3D21-206ENST00000508854 H3BRM9 83 aa5.8□□□□□ -1.48
SH3D21-206ENST00000508854 ATP5LO75964 103 aa5.8□□□□□ -1.48
SH3D21-206ENST00000508854 PMVKQ15126 192 aa5.8□□□□□ -1.48
SH3D21-206ENST00000508854 COX7B2Q8TF08 81 aa5.8□□□□□ -1.48
SH3D21-206ENST00000508854 IGLV5-45A0A087WSX0 123 aa5.79□□□□□ -1.48
SH3D21-206ENST00000508854 HBDP02042 147 aa5.79□□□□□ -1.48
SH3D21-206ENST00000508854 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
SH3D21-206ENST00000508854 CHCHD1Q96BP2 118 aaKnown RBP5.79□□□□□ -1.48
SH3D21-206ENST00000508854 MUC17Q685J3 4493 aa5.78□□□□□ -1.48
SH3D21-206ENST00000508854 SMIM1B2RUZ4 78 aa5.78□□□□□ -1.48
SH3D21-206ENST00000508854 LINC00518Q8N0U6 118 aa5.78□□□□□ -1.48
SH3D21-206ENST00000508854 C18orf32Q8TCD1 76 aa5.78□□□□□ -1.48
SH3D21-206ENST00000508854 PPDPFQ9H3Y8 114 aa5.78□□□□□ -1.48
SH3D21-206ENST00000508854 CST9LQ9H4G1 147 aa5.78□□□□□ -1.48
SH3D21-206ENST00000508854 IGKV2-28A0A075B6P5 120 aa5.77□□□□□ -1.49
SH3D21-206ENST00000508854 IGKV2D-28P01615 120 aa5.77□□□□□ -1.49
SH3D21-206ENST00000508854 RPL24P83731 157 aaKnown RBP5.77□□□□□ -1.49
SH3D21-206ENST00000508854 FP248Q71RG6 208 aaPredicted RBP5.77□□□□□ -1.49
SH3D21-206ENST00000508854 LINC00337Q8N6G1 96 aa5.77□□□□□ -1.49
SH3D21-206ENST00000508854 LINC01547P58512 204 aaPredicted RBP5.76□□□□□ -1.49
SH3D21-206ENST00000508854 FAM19A1Q7Z5A9 133 aa5.76□□□□□ -1.49
SH3D21-206ENST00000508854 IGLC3P0DOY3 106 aa5.74□□□□□ -1.49
SH3D21-206ENST00000508854 PRLHP81277 87 aa5.74□□□□□ -1.49
SH3D21-206ENST00000508854 COX17Q14061 63 aa5.74□□□□□ -1.49
SH3D21-206ENST00000508854 CBLN2Q8IUK8 224 aa5.74□□□□□ -1.49
SH3D21-206ENST00000508854 PLEKHB2Q96CS7 222 aa5.74□□□□□ -1.49
SH3D21-206ENST00000508854 YPEL4Q96NS1 127 aa5.74□□□□□ -1.49
SH3D21-206ENST00000508854 TMEM126AQ9H061 195 aa5.74□□□□□ -1.49
SH3D21-206ENST00000508854 TRAV12-1A0A0B4J245 112 aa5.73□□□□□ -1.49
SH3D21-206ENST00000508854 C5orf52A6NGY3 159 aa5.73□□□□□ -1.49
SH3D21-206ENST00000508854 ZNF706Q9Y5V0 76 aaPredicted RBP5.73□□□□□ -1.49
SH3D21-206ENST00000508854 PCP4L1A6NKN8 68 aa5.72□□□□□ -1.49
SH3D21-206ENST00000508854 LINC00587B1AMM8 73 aa5.72□□□□□ -1.49
SH3D21-206ENST00000508854 HSBP1O75506 76 aa5.72□□□□□ -1.49
SH3D21-206ENST00000508854 SPINK8P0C7L1 97 aa5.72□□□□□ -1.49
SH3D21-206ENST00000508854 PFN2P35080 140 aa5.72□□□□□ -1.49
SH3D21-206ENST00000508854 SEC61BP60468 96 aaKnown RBP5.72□□□□□ -1.49
SH3D21-206ENST00000508854 A0A096LNJ9 63 aa5.71□□□□□ -1.5
SH3D21-206ENST00000508854 TMEM238C9JI98 176 aa5.71□□□□□ -1.5
SH3D21-206ENST00000508854 M0R378 163 aa5.71□□□□□ -1.5
SH3D21-206ENST00000508854 VPREB1P12018 145 aa5.71□□□□□ -1.5
SH3D21-206ENST00000508854 ASB16-AS1Q495Z4 193 aa5.71□□□□□ -1.5
SH3D21-206ENST00000508854 BAGE3Q86Y29 109 aa5.71□□□□□ -1.5
SH3D21-206ENST00000508854 SND1-IT1Q9HBX3 110 aa5.71□□□□□ -1.5
SH3D21-206ENST00000508854 IGLV5-39A0A0G2JS06 123 aa5.7□□□□□ -1.5
SH3D21-206ENST00000508854 SCO1O75880 301 aa5.7□□□□□ -1.5
SH3D21-206ENST00000508854 SPINK1P00995 79 aa5.7□□□□□ -1.5
SH3D21-206ENST00000508854 LORP23490 312 aaPredicted RBP5.7□□□□□ -1.5
SH3D21-206ENST00000508854 NDUFA6P56556 154 aa5.7□□□□□ -1.5
SH3D21-206ENST00000508854 C3orf22Q8N5N4 141 aa5.7□□□□□ -1.5
SH3D21-206ENST00000508854 IFI27L1Q96BM0 104 aa5.7□□□□□ -1.5
SH3D21-206ENST00000508854 URB1-AS1Q96HZ7 61 aa5.7□□□□□ -1.5
SH3D21-206ENST00000508854 HIGD2AQ9BW72 106 aa5.7□□□□□ -1.5
SH3D21-206ENST00000508854 NDUFA12Q9UI09 145 aa5.7□□□□□ -1.5
SH3D21-206ENST00000508854 ERG28Q9UKR5 140 aa5.7□□□□□ -1.5
SH3D21-206ENST00000508854 SPRR4Q96PI1 79 aa5.69□□□□□ -1.5
SH3D21-206ENST00000508854 HSPB8Q9UJY1 196 aa5.69□□□□□ -1.5
SH3D21-206ENST00000508854 KRTAP13-3Q3SY46 172 aa5.68□□□□□ -1.5
SH3D21-206ENST00000508854 LEPROTL1O95214 131 aa5.67□□□□□ -1.5
SH3D21-206ENST00000508854 TRGC2P03986 189 aa5.67□□□□□ -1.5
SH3D21-206ENST00000508854 ZNF22P17026 224 aaPredicted RBP5.67□□□□□ -1.5
SH3D21-206ENST00000508854 HERV-K104P63124 156 aa5.67□□□□□ -1.5
SH3D21-206ENST00000508854 TMEM170BQ5T4T1 132 aa5.67□□□□□ -1.5
SH3D21-206ENST00000508854 C11orf86A6NJI1 115 aa5.66□□□□□ -1.5
SH3D21-206ENST00000508854 PLNP26678 52 aa5.66□□□□□ -1.5
SH3D21-206ENST00000508854 FAM19A2Q8N3H0 131 aa5.66□□□□□ -1.5
SH3D21-206ENST00000508854 DAND5Q8N907 189 aa5.66□□□□□ -1.5
SH3D21-206ENST00000508854 Q8NBF4 154 aa5.66□□□□□ -1.5
SH3D21-206ENST00000508854 COLCA2A8K830 154 aa5.65□□□□□ -1.5
SH3D21-206ENST00000508854 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
SH3D21-206ENST00000508854 TMEM223A0PJW6 202 aa5.64□□□□□ -1.51
SH3D21-206ENST00000508854 PRYO14603 147 aa5.64□□□□□ -1.51
SH3D21-206ENST00000508854 SMCPP49901 116 aaPredicted RBP5.64□□□□□ -1.51
SH3D21-206ENST00000508854 AKR1D1P51857 326 aa5.64□□□□□ -1.51
SH3D21-206ENST00000508854 LINC00158P58513 81 aa5.64□□□□□ -1.51
SH3D21-206ENST00000508854 RPS29P62273 56 aaKnown RBP5.64□□□□□ -1.51
SH3D21-206ENST00000508854 PMCHL1Q16048 86 aa5.64□□□□□ -1.51
SH3D21-206ENST00000508854 ZNF625Q96I27 306 aaPredicted RBP5.64□□□□□ -1.51
SH3D21-206ENST00000508854 MYMXA0A1B0GTQ4 84 aa5.63□□□□□ -1.51
SH3D21-206ENST00000508854 HERVK_113P61574 105 aa5.63□□□□□ -1.51
SH3D21-206ENST00000508854 CRCT1Q9UGL9 99 aa5.63□□□□□ -1.51
SH3D21-206ENST00000508854 ETDCA0A1B0GVM5 59 aa5.62□□□□□ -1.51
SH3D21-206ENST00000508854 SLC25A20O43772 301 aa5.62□□□□□ -1.51
SH3D21-206ENST00000508854 SERF1AO75920 110 aa5.62□□□□□ -1.51
SH3D21-206ENST00000508854 NMUP48645 174 aa5.62□□□□□ -1.51
SH3D21-206ENST00000508854 SEC61GP60059 68 aa5.62□□□□□ -1.51
SH3D21-206ENST00000508854 SSBP3-AS1Q7Z2R9 100 aa5.62□□□□□ -1.51
SH3D21-206ENST00000508854 SMCR5Q8TEV8 140 aa5.62□□□□□ -1.51
SH3D21-206ENST00000508854 VAMP3Q15836 100 aa5.61□□□□□ -1.51
SH3D21-206ENST00000508854 LINC00483Q53H64 154 aa5.61□□□□□ -1.51
SH3D21-206ENST00000508854 C5orf47Q569G3 176 aa5.61□□□□□ -1.51
SH3D21-206ENST00000508854 Q8NDZ9 215 aa5.61□□□□□ -1.51
SH3D21-206ENST00000508854 KCNQ1DNQ9H478 68 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms