RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 BTAF1O14981 1849 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 ITSN1Q15811 1721 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 ARHGEF5Q12774 1597 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 FXYD6-FXYD2A0A087WZ82 144 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 DEFB112Q30KQ8 113 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 Q8IZM0 81 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 PDCD10Q9BUL8 212 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 LENEPQ9Y5L5 61 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 S4R3F8 94 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 PATJQ8NI35 1801 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 A0A0G2JMZ2 1700 aa-0.52□□□□□ -2.49
GYPB-210ENST00000508841 TMEM131LA2VDJ0 1609 aa-0.53□□□□□ -2.49
GYPB-210ENST00000508841 PRDM15P57071 1507 aaPredicted RBP-0.53□□□□□ -2.49
GYPB-210ENST00000508841 LINC00959A0A1B0GUT2 108 aa-0.53□□□□□ -2.49
GYPB-210ENST00000508841 C10orf128Q5T292 105 aa-0.53□□□□□ -2.49
GYPB-210ENST00000508841 DEFB124Q8NES8 71 aa-0.53□□□□□ -2.49
GYPB-210ENST00000508841 USP32Q8NFA0 1604 aa-0.53□□□□□ -2.49
GYPB-210ENST00000508841 NRKQ7Z2Y5 1582 aa-0.53□□□□□ -2.49
GYPB-210ENST00000508841 CLASP1Q7Z460 1538 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 LRRC7Q96NW7 1537 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 EEA1Q15075 1411 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 NCOA3Q9Y6Q9 1424 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 SBF2Q86WG5 1849 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 DOCK2Q92608 1830 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 RGPD3A6NKT7 1758 aaPredicted RBP-0.54□□□□□ -2.5
GYPB-210ENST00000508841 LRRC37AA6NMS7 1700 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 NRAPQ86VF7 1730 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 CRYBG1Q9Y4K1 1723 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 C9orf92A6NGG3 77 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 M0R135 149 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 HIST1H1DP16402 221 aaKnown RBP-0.54□□□□□ -2.5
GYPB-210ENST00000508841 SPAG11BQ08648 103 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 MYOM1P52179 1685 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 NESP48681 1621 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 PEG3Q9GZU2 1588 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 EFCAB6Q5THR3 1501 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 CFTRP13569 1480 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 MRC1P22897 1456 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 NCOA2Q15596 1464 aa-0.54□□□□□ -2.5
GYPB-210ENST00000508841 RGPD2P0DJD1 1756 aa-0.55□□□□□ -2.5
GYPB-210ENST00000508841 POLR1AO95602 1720 aaPredicted RBP-0.55□□□□□ -2.5
GYPB-210ENST00000508841 PKD1L3Q7Z443 1732 aa-0.55□□□□□ -2.5
GYPB-210ENST00000508841 ARAP2Q8WZ64 1704 aa-0.55□□□□□ -2.5
GYPB-210ENST00000508841 ANKRD26Q9UPS8 1709 aa-0.55□□□□□ -2.5
GYPB-210ENST00000508841 RERGLQ9H628 205 aa-0.55□□□□□ -2.5
GYPB-210ENST00000508841 QSER1Q2KHR3 1735 aa-0.55□□□□□ -2.5
GYPB-210ENST00000508841 SPHKAPQ2M3C7 1700 aa-0.55□□□□□ -2.5
GYPB-210ENST00000508841 SUPT6HQ7KZ85 1726 aaKnown RBP-0.55□□□□□ -2.5
GYPB-210ENST00000508841 PPIP5K1Q6PFW1 1433 aa-0.55□□□□□ -2.5
GYPB-210ENST00000508841 KIAA0556O60303 1618 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 NRXN3Q9Y4C0 1643 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 CTXND1A0A1B0GTU2 59 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 H3BNG1 76 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 KDM5DQ9BY66 1539 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 ANKRD36CQ5JPF3 1778 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 XRN1Q8IZH2 1706 aaKnown RBP-0.56□□□□□ -2.5
GYPB-210ENST00000508841 TEX14Q8IWB6 1497 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 WDR7Q9Y4E6 1490 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 CROCC2H7BZ55 1655 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 DEPDC5O75140 1603 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 KIF14Q15058 1648 aa-0.56□□□□□ -2.5
GYPB-210ENST00000508841 RNF17Q9BXT8 1623 aaKnown RBP-0.56□□□□□ -2.5
GYPB-210ENST00000508841 TIAM1Q13009 1591 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 DNMBPQ6XZF7 1577 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 NFAT5O94916 1531 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 CUX1P39880 1505 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 TOGARAM1Q9Y4F4 1720 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 LOC730098B7Z3J9 87 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 SELENOWP63302 87 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 DEFB110Q30KQ9 67 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 SPAG11AQ6PDA7 123 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 PLEKHH2Q8IVE3 1493 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 FYCO1Q9BQS8 1478 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 SHROOM2Q13796 1616 aa-0.57□□□□□ -2.5
GYPB-210ENST00000508841 TRPM2O94759 1503 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 NEXMIFQ5QGS0 1516 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 FAM135AQ9P2D6 1515 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 ROBO1Q9Y6N7 1651 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 A8MTW9 85 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 DEFB136Q30KP8 78 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 TTC9CQ8N5M4 171 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 SNRNP25Q9BV90 132 aaKnown RBP-0.58□□□□□ -2.5
GYPB-210ENST00000508841 UBE2D4Q9Y2X8 147 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 A0A1B0GUL6 1792 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 MYH7P12883 1935 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 UGGT1Q9NYU2 1555 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 RGPD1P0DJD0 1748 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 ABCA3Q99758 1704 aa-0.58□□□□□ -2.5
GYPB-210ENST00000508841 ITSN2Q9NZM3 1697 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 RALGAPBQ86X10 1494 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 NRXN1Q9ULB1 1477 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 LTN1O94822 1766 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 SCN11AQ9UI33 1791 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 COX17Q14061 63 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 Q6AWC8 147 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 Q8N8P6 123 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 SERP1Q9Y6X1 66 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 V9GYH0 126 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 PLXNC1O60486 1568 aa-0.59□□□□□ -2.5
GYPB-210ENST00000508841 MADDQ8WXG6 1647 aa-0.6□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms